RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 ISG20Q96AZ6 181 aaKnown RBP13.52□□□□□ -0.25
SMG6-203ENST00000536871 PHF21BQ96EK2 531 aa13.52□□□□□ -0.25
SMG6-203ENST00000536871 PDLIM5Q96HC4 596 aaKnown RBP13.52□□□□□ -0.25
SMG6-203ENST00000536871 TUBGCP5Q96RT8 1024 aa13.52□□□□□ -0.25
SMG6-203ENST00000536871 GPR63Q9BZJ6 419 aa13.52□□□□□ -0.25
SMG6-203ENST00000536871 ATP13A3Q9H7F0 1226 aa13.52□□□□□ -0.25
SMG6-203ENST00000536871 CYP4F12Q9HCS2 524 aa13.52□□□□□ -0.25
SMG6-203ENST00000536871 IL23AQ9NPF7 189 aa13.52□□□□□ -0.25
SMG6-203ENST00000536871 ABCB8Q9NUT2 735 aa13.52□□□□□ -0.25
SMG6-203ENST00000536871 POLR3BQ9NW08 1133 aaPredicted RBP13.52□□□□□ -0.25
SMG6-203ENST00000536871 IL17CQ9P0M4 197 aa13.52□□□□□ -0.25
SMG6-203ENST00000536871 RNF112Q9ULX5 631 aa13.52□□□□□ -0.25
SMG6-203ENST00000536871 ZNF711Q9Y462 761 aa13.52□□□□□ -0.25
SMG6-203ENST00000536871 LOC100653049A0A140TA62 436 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 NEMP2A6NFY4 417 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 H0Y3Z8 333 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 UBDO15205 165 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 HTRA2O43464 458 aaPredicted RBP13.51□□□□□ -0.25
SMG6-203ENST00000536871 BUD23O43709 281 aaKnown RBP13.51□□□□□ -0.25
SMG6-203ENST00000536871 KRT34O76011 436 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 MLYCDO95822 493 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 FESP07332 822 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 CNPP09543 421 aaKnown RBP13.51□□□□□ -0.25
SMG6-203ENST00000536871 GFAPP14136 432 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 HNRNPLP14866 589 aaKnown RBP eCLIP13.51□□□□□ -0.251e-6■■■■□ 21
SMG6-203ENST00000536871 CSF2RAP15509 400 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 ACADSP16219 412 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 FMO4P31512 558 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 ACADVLP49748 655 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 PGGT1BP53609 377 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 IL2P60568 153 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 HTRA4P83105 476 aaPredicted RBP13.51□□□□□ -0.25
SMG6-203ENST00000536871 TIAL1Q01085 375 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMG6-203ENST00000536871 ART3Q13508 389 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 TAF11Q15544 211 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 PTPRNQ16849 979 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 ZRANB3Q5FWF4 1079 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 ANKS6Q68DC2 871 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 FAM117BQ6P1L5 589 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 PIM3Q86V86 326 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 SNX32Q86XE0 403 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 TMC8Q8IU68 726 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 CBARPQ8N350 705 aaPredicted RBP13.51□□□□□ -0.25
SMG6-203ENST00000536871 FBXO39Q8N4B4 442 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 EFHBQ8N7U6 833 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 PTGR2Q8N8N7 351 aaPredicted RBP13.51□□□□□ -0.25
SMG6-203ENST00000536871 FBXO27Q8NI29 283 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 WBP2Q969T9 261 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 PTERQ96BW5 349 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 ARMC5Q96C12 935 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 PANX3Q96QZ0 392 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 CYP2S1Q96SQ9 504 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 SLC24A3Q9HC58 644 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 ASAH2Q9NR71 780 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 PCDHB9Q9Y5E1 797 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 ACTL7AQ9Y615 435 aa13.51□□□□□ -0.25
SMG6-203ENST00000536871 E5RI56 91 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 PRMT5O14744 637 aaPredicted RBP13.5□□□□□ -0.25
SMG6-203ENST00000536871 NVLO15381 856 aaKnown RBP13.5□□□□□ -0.25
SMG6-203ENST00000536871 KLK8O60259 260 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 KRT36O76013 467 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 C8AP07357 584 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 ZNF7P17097 686 aaPredicted RBP13.5□□□□□ -0.25
SMG6-203ENST00000536871 KCNA5P22460 613 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 SERPINA4P29622 427 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 ABL2P42684 1182 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 STX1BP61266 288 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 SNRPD1P62314 119 aaKnown RBP13.5□□□□□ -0.25
SMG6-203ENST00000536871 PTPRCAPQ14761 206 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 MUM1Q2TAK8 710 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 ACCSLQ4AC99 568 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 UNC50Q53HI1 259 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 ZDHHC20Q5W0Z9 365 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 FBXO46Q6PJ61 603 aaPredicted RBP13.5□□□□□ -0.25
SMG6-203ENST00000536871 LINGO4Q6UY18 593 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 LRRC74BQ6ZQY2 392 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 CLP1Q92989 425 aaKnown RBP13.5□□□□□ -0.25
SMG6-203ENST00000536871 SLC22A12Q96S37 553 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 NUSAP1Q9BXS6 441 aaKnown RBP13.5□□□□□ -0.25
SMG6-203ENST00000536871 LRRC3Q9BY71 257 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 MRPL1Q9BYD6 325 aaKnown RBP13.5□□□□□ -0.25
SMG6-203ENST00000536871 CFAP97Q9P2B7 532 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 FKBPLQ9UIM3 349 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 INSL6Q9Y581 213 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 MEI4A8MW99 385 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 GIPC1O14908 333 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 MAP3K7O43318 606 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 CXCL14O95715 111 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 ITGALP20701 1170 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 CCR10P46092 362 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 NUDT2P50583 147 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 LCP2Q13094 533 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 GPR33Q49SQ1 333 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 PAQR3Q6TCH7 311 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 BNC2Q6ZN30 1099 aaPredicted RBP13.5□□□□□ -0.25
SMG6-203ENST00000536871 GAREM2Q75VX8 874 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 NECAB2Q7Z6G3 386 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 RYBPQ8N488 228 aaPredicted RBP13.5□□□□□ -0.25
SMG6-203ENST00000536871 KREMEN2Q8NCW0 462 aa13.5□□□□□ -0.25
SMG6-203ENST00000536871 DIS3LQ8TF46 1054 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms