RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 TRPC4APQ8TEL6 797 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 TUBGCP3Q96CW5 907 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 FAM193BQ96PV7 902 aaPredicted RBP15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 CIB1Q99828 191 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 TRIM15Q9C019 465 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 TUBB1Q9H4B7 451 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 RETREG1Q9H6L5 497 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 NLE1Q9NVX2 485 aaPredicted RBP15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 CNOT6Q9ULM6 557 aaKnown RBP15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 OR6C75A6NL08 312 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 NME4O00746 187 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 HNRNPRO43390 633 aaKnown RBP15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 H6PDO95479 791 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 HGFP14210 728 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 PRKCQQ04759 706 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 BNIP2Q12982 314 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 C5orf22Q49AR2 442 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 ANKS6Q68DC2 871 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 BLOC1S3Q6QNY0 202 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 PAQR3Q6TCH7 311 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 ERMP1Q7Z2K6 904 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 SLC15A3Q8IY34 581 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 FBXO39Q8N4B4 442 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 TTC9BQ8N6N2 239 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 TSPAN14Q8NG11 270 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 LRCH3Q96II8 777 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 NSUN5Q96P11 429 aaKnown RBP15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 TMEM79Q9BSE2 394 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 MAGEH1Q9H213 219 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 CCDC68Q9H2F9 335 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 COMMD8Q9NX08 183 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 THEGQ9P2T0 379 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 ARIH1Q9Y4X5 557 aaPredicted RBP15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 AK5Q9Y6K8 562 aa15.97■□□□□ 0.15
CHMP1A-202ENST00000535997 LRRC14BA6NHZ5 514 aa15.96■□□□□ 0.15
CHMP1A-202ENST00000535997 SYCE1LA8MT33 242 aa15.96■□□□□ 0.15
CHMP1A-202ENST00000535997 FAM155AB1AL88 458 aaPredicted RBP15.96■□□□□ 0.15
CHMP1A-202ENST00000535997 RHOBTB1O94844 696 aa15.96■□□□□ 0.15
CHMP1A-202ENST00000535997 PIRTP0C851 137 aa15.96■□□□□ 0.15
CHMP1A-202ENST00000535997 CAPN3P20807 821 aa15.96■□□□□ 0.15
CHMP1A-202ENST00000535997 TACR2P21452 398 aa15.96■□□□□ 0.15
CHMP1A-202ENST00000535997 RAD51Q06609 339 aa15.96■□□□□ 0.15
CHMP1A-202ENST00000535997 FOXM1Q08050 763 aa15.96■□□□□ 0.15
CHMP1A-202ENST00000535997 CRHR2Q13324 411 aa15.96■□□□□ 0.15
CHMP1A-202ENST00000535997 GPR162Q16538 588 aa15.96■□□□□ 0.15
CHMP1A-202ENST00000535997 NHSL2Q5HYW2 709 aa15.96■□□□□ 0.15
CHMP1A-202ENST00000535997 PITRM1Q5JRX3 1037 aa15.96■□□□□ 0.15
CHMP1A-202ENST00000535997 FAM219BQ5XKK7 198 aa15.96■□□□□ 0.15
CHMP1A-202ENST00000535997 NADSYN1Q6IA69 706 aa15.96■□□□□ 0.15
CHMP1A-202ENST00000535997 PACRGLQ8N7B6 248 aa15.96■□□□□ 0.15
CHMP1A-202ENST00000535997 LRRC58Q96CX6 371 aa15.96■□□□□ 0.15
CHMP1A-202ENST00000535997 DTNBP1Q96EV8 351 aa15.96■□□□□ 0.15
CHMP1A-202ENST00000535997 HIC2Q96JB3 615 aa15.96■□□□□ 0.15
CHMP1A-202ENST00000535997 MPP4Q96JB8 637 aa15.96■□□□□ 0.15
CHMP1A-202ENST00000535997 SPATA17Q96L03 361 aa15.96■□□□□ 0.15
CHMP1A-202ENST00000535997 PSKH2Q96QS6 385 aa15.96■□□□□ 0.15
CHMP1A-202ENST00000535997 MGME1Q9BQP7 344 aa15.96■□□□□ 0.15
CHMP1A-202ENST00000535997 RNF112Q9ULX5 631 aa15.96■□□□□ 0.15
CHMP1A-202ENST00000535997 ZNF839A8K0R7 811 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 F5H5T6 163 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 HTRA2O43464 458 aaPredicted RBP15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 AKAP10O43572 662 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 TIPRLO75663 272 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 LINC00032P0C843 101 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 IL10P22301 178 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 SLC6A2P23975 617 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 NME5P56597 212 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 INPP5AQ14642 412 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 OGFOD2Q6N063 350 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 SPATA19Q7Z5L4 167 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 CAMK1DQ8IU85 385 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 MYO1HQ8N1T3 1032 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 PCSK9Q8NBP7 692 aaKnown RBP15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 MYEOVQ96EZ4 313 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 KCNA7Q96RP8 456 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 C1QTNF3Q9BXJ4 246 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 ANKRD60Q9BZ19 345 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 IL1RL2Q9HB29 575 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 SLC52A3Q9NQ40 469 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 PNPLA3Q9NST1 481 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 ACTR3BQ9P1U1 418 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 SEPT3Q9UH03 358 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 POLG2Q9UHN1 485 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 SLC27A5Q9Y2P5 690 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 MED16Q9Y2X0 877 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 PTGDR2Q9Y5Y4 395 aa15.96■□□□□ 0.14
CHMP1A-202ENST00000535997 A0A0D9SEW6 157 aa15.95■□□□□ 0.14
CHMP1A-202ENST00000535997 UBA6A0AVT1 1052 aaPredicted RBP15.95■□□□□ 0.14
CHMP1A-202ENST00000535997 ANKRD33BA6NCL7 494 aa15.95■□□□□ 0.14
CHMP1A-202ENST00000535997 CCDC160A6NGH7 325 aa15.95■□□□□ 0.14
CHMP1A-202ENST00000535997 SUPT3HB4E1H0 165 aa15.95■□□□□ 0.14
CHMP1A-202ENST00000535997 SUPT3HO75486 399 aa15.95■□□□□ 0.14
CHMP1A-202ENST00000535997 NDUFS3O75489 264 aa15.95■□□□□ 0.14
CHMP1A-202ENST00000535997 CKMT2P17540 419 aa15.95■□□□□ 0.14
CHMP1A-202ENST00000535997 ATP6V1B2P21281 511 aa15.95■□□□□ 0.14
CHMP1A-202ENST00000535997 FGFR3P22607 806 aa15.95■□□□□ 0.14
CHMP1A-202ENST00000535997 PSMA3P25788 255 aa15.95■□□□□ 0.14
CHMP1A-202ENST00000535997 EEF1DP29692 281 aaKnown RBP15.95■□□□□ 0.14
CHMP1A-202ENST00000535997 FMO4P31512 558 aa15.95■□□□□ 0.14
CHMP1A-202ENST00000535997 MRPL19P49406 292 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms