RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-205	ENST00000535375	IL17RC	Q8NAC3	791 aa		4.99	□□□□□ -1.61
PRKDC-205	ENST00000535375	FAM149B1	Q96BN6	582 aa		4.99	□□□□□ -1.61
PRKDC-205	ENST00000535375	INTS12	Q96CB8	462 aa	Known RBP	4.99	□□□□□ -1.61
PRKDC-205	ENST00000535375	PIP5K1A	Q99755	562 aa		4.99	□□□□□ -1.61
PRKDC-205	ENST00000535375	C1QTNF5	Q9BXJ0	243 aa		4.99	□□□□□ -1.61
PRKDC-205	ENST00000535375	MMP28	Q9H239	520 aa		4.99	□□□□□ -1.61
PRKDC-205	ENST00000535375	FKRP	Q9H9S5	495 aa		4.99	□□□□□ -1.61
PRKDC-205	ENST00000535375	HS3ST1	O14792	307 aa		4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	CAPN9	O14815	690 aa		4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	SP1	P08047	785 aa		4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	HLA-DOB	P13765	273 aa		4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	MYOD1	P15172	320 aa		4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	ITGA2	P17301	1181 aa		4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	FASLG	P48023	281 aa		4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	AMPH	P49418	695 aa		4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	OLR1	P78380	273 aa		4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	GOLGA8DP	Q0D2H9	430 aa		4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	TMEM115	Q12893	351 aa	Predicted RBP	4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	FRG1	Q14331	258 aa	Known RBP	4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	TMEM35A	Q53FP2	167 aa		4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	DPPA4	Q7L190	304 aa		4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	DSG4	Q86SJ6	1040 aa		4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	KBTBD3	Q8NAB2	608 aa		4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	OR14L1P	Q8NHC6	308 aa		4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	LRRC8C	Q8TDW0	803 aa		4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	DNAAF4	Q8WXU2	420 aa		4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	PIGT	Q969N2	578 aa		4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	RRNAD1	Q96FB5	475 aa	Known RBP	4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	GRAMD2B	Q96HH9	432 aa		4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	ACOX2	Q99424	681 aa		4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	SYT17	Q9BSW7	474 aa		4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	USP44	Q9H0E7	712 aa		4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	IRAK4	Q9NWZ3	460 aa		4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	PGAP2	Q9UHJ9	254 aa		4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375	MAU2	Q9Y6X3	613 aa		4.98	□□□□□ -1.61
PRKDC-205	ENST00000535375		A0A1W2PRG0	241 aa		4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	P2RY10	O00398	339 aa		4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	DVL1	O14640	695 aa		4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	ATP1A3	P13637	1013 aa		4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	HOXC9	P31274	260 aa		4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	ELF1	P32519	619 aa		4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	KRT9	P35527	623 aa		4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	DVL1P1	P54792	670 aa	Predicted RBP	4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	TAS2R38	P59533	333 aa		4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	G3BP1	Q13283	466 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	GTF2H2	Q13888	395 aa		4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	PDSS1	Q5T2R2	415 aa		4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	INTS11	Q5TA45	600 aa	Known RBP	4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	GTF2H2C	Q6P1K8	395 aa		4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	BRAT1	Q6PJG6	821 aa		4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	SLC26A9	Q7LBE3	791 aa		4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	DIS3L2	Q8IYB7	885 aa	Known RBP	4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	NAXE	Q8NCW5	288 aa		4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	ETNPPL	Q8TBG4	499 aa		4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	APBB2	Q92870	758 aa		4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	IGSF8	Q969P0	613 aa		4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	LRRC1	Q9BTT6	524 aa		4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	SLC26A6	Q9BXS9	759 aa		4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	SPRY4	Q9C004	299 aa		4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	SEBOX	Q9HB31	216 aa	Predicted RBP	4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	FBRSL1	Q9HCM7	1045 aa	Known RBP	4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	FBXL2	Q9UKC9	423 aa		4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	KLHL20	Q9Y2M5	609 aa		4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	TMEM98	Q9Y2Y6	226 aa		4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	PTPRC	P08575	1304 aa		4.97	□□□□□ -1.61
PRKDC-205	ENST00000535375	HSPA1A	P0DMV8	641 aa	Known RBP	4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	HSPA1B	P0DMV9	641 aa	Known RBP	4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	ANOS1	P23352	680 aa		4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	CCR9	P51686	369 aa		4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	ISL1	P61371	349 aa		4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	PITX1	P78337	314 aa	Predicted RBP	4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	MAD2L1	Q13257	205 aa	Predicted RBP	4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	ZNF234	Q14588	700 aa		4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	MYLK3	Q32MK0	819 aa		4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	KCTD8	Q6ZWB6	473 aa		4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	CPLX4	Q7Z7G2	160 aa		4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	SMIM29	Q86T20	159 aa		4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	BEST3	Q8N1M1	668 aa		4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	IL17RE	Q8NFR9	667 aa		4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	HMGCLL1	Q8TB92	370 aa		4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	TAAR8	Q969N4	342 aa		4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	MMAB	Q96EY8	250 aa	Predicted RBP	4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	ZNF583	Q96ND8	569 aa		4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	MAP7D2	Q96T17	732 aa		4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	TRMT61B	Q9BVS5	477 aa	Known RBP	4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	STRA6	Q9BX79	667 aa		4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	KLHL1	Q9NR64	748 aa		4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	ZFP57	Q9NU63	452 aa		4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	TAAR2	Q9P1P5	351 aa		4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	ABI3	Q9P2A4	366 aa		4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	CNOT8	Q9UFF9	292 aa	Known RBP	4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	ACSL5	Q9ULC5	683 aa		4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	OR2W1	Q9Y3N9	320 aa		4.96	□□□□□ -1.62
PRKDC-205	ENST00000535375	PRR23A	A6NEV1	266 aa		4.95	□□□□□ -1.62
PRKDC-205	ENST00000535375	NPIPB15	A6NHN6	443 aa	Predicted RBP	4.95	□□□□□ -1.62
PRKDC-205	ENST00000535375	WDR1	O75083	606 aa		4.95	□□□□□ -1.62
PRKDC-205	ENST00000535375	JRK	O75564	520 aa		4.95	□□□□□ -1.62
PRKDC-205	ENST00000535375	SLC25A12	O75746	678 aa		4.95	□□□□□ -1.62
PRKDC-205	ENST00000535375	RTN3	O95197	1032 aa	Predicted RBP	4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms