RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 OR2L3Q8NG85 312 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 CNPPD1Q9BV87 410 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 DHRS7Q9Y394 339 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 PCDHGC5Q9Y5F6 944 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 MYO10Q9HD67 2058 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 RPL17P18621 184 aaKnown RBP12.6□□□□□ -0.39
SPG11-203ENST00000535302 NT5EP21589 574 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 GNALP38405 381 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 PRKAA2P54646 552 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 PSME3P61289 254 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 DNASE1L3Q13609 305 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 PIK3R6Q5UE93 754 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 UBE2R2Q712K3 238 aaPredicted RBP12.6□□□□□ -0.39
SPG11-203ENST00000535302 PLPPR4Q7Z2D5 763 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 PYROXD2Q8N2H3 581 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 PIWIL2Q8TC59 973 aaKnown RBP12.6□□□□□ -0.39
SPG11-203ENST00000535302 HMG20AQ9NP66 347 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 ATAD3AQ9NVI7 634 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 MAP4K5Q9Y4K4 846 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 CASKO14936 926 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 ENTPD5O75356 428 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 SMARCD3Q6STE5 483 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.6□□□□□ -0.39
SPG11-203ENST00000535302 KCTD8Q6ZWB6 473 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 STK32AQ8WU08 396 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 ART4Q93070 314 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 FATE1Q969F0 183 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 P2RY11Q96G91 374 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 GIT1Q9Y2X7 761 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 SERPINA1P01009 418 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 ZNF806P0C7X5 589 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 SAGP10523 405 aaPredicted RBP12.6□□□□□ -0.39
SPG11-203ENST00000535302 CLCNKBP51801 687 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 ITGA7Q13683 1181 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 RBM44Q6ZP01 1051 aaKnown RBP12.6□□□□□ -0.39
SPG11-203ENST00000535302 POF1BQ8WVV4 589 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 CKAP2Q8WWK9 683 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 C1QTNF1Q9BXJ1 281 aa12.6□□□□□ -0.39
SPG11-203ENST00000535302 ZNF541Q9H0D2 1346 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 CABYRO75952 493 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 SLC35G4P0C7Q5 338 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 MAT2AP31153 395 aaKnown RBP12.59□□□□□ -0.39
SPG11-203ENST00000535302 CHAF1BQ13112 559 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 CCNYL2Q5T2Q4 361 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 MYO19Q96H55 970 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 OR52E6Q96RD3 313 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 CYP3A7-CYP3A51PA0A087WV96 503 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 TRIM64A6NGJ6 449 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 TGFB1I1O43294 461 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 AP2A2O94973 939 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 CST3P01034 146 aaPredicted RBP12.59□□□□□ -0.39
SPG11-203ENST00000535302 CYP3A7P24462 503 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 CORO1AP31146 461 aaKnown RBP12.59□□□□□ -0.39
SPG11-203ENST00000535302 MATKP42679 507 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 CBX5P45973 191 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 CLCN5P51795 746 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 CRY2Q49AN0 593 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 CYP2S1Q96SQ9 504 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 PSME2Q9UL46 239 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.59□□□□□ -0.39
SPG11-203ENST00000535302 LPOP22079 712 aaPredicted RBP12.59□□□□□ -0.39
SPG11-203ENST00000535302 PEX6Q13608 980 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 SULT1C3Q6IMI6 304 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 AGO3Q9H9G7 860 aaKnown RBP12.59□□□□□ -0.39
SPG11-203ENST00000535302 PARPBPQ9NWS1 579 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 MALT1Q9UDY8 824 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 RAB21Q9UL25 225 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 FAM172BPA6NC97 362 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 FTH1P02794 183 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 RPS6KA3P51812 740 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 WNT3AP56704 352 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 HSF2Q03933 536 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 CDK18Q07002 472 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 PCBP2Q15366 365 aaKnown RBP eCLIP12.59□□□□□ -0.39
SPG11-203ENST00000535302 ZCCHC10Q8TBK6 192 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 C1GALT1C1Q96EU7 318 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 WDR55Q9H6Y2 383 aaPredicted RBP12.59□□□□□ -0.39
SPG11-203ENST00000535302 UCKL1Q9NWZ5 548 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 ERGIC3Q9Y282 383 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 NCANO14594 1321 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 G3V2T6 193 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 SLC9A3R1O14745 358 aaPredicted RBP12.59□□□□□ -0.39
SPG11-203ENST00000535302 MFSD11O43934 449 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 ITGAVP06756 1048 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 F7P08709 466 aaPredicted RBP12.59□□□□□ -0.39
SPG11-203ENST00000535302 POU2F1P14859 743 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 MPSTP25325 297 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 MINDY4Q4G0A6 757 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 FRRS1Q6ZNA5 592 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 FAM163AQ96GL9 167 aaPredicted RBP12.59□□□□□ -0.39
SPG11-203ENST00000535302 SGK2Q9HBY8 427 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 GLUD1P00367 558 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 DNTTP04053 509 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 JAZF1Q86VZ6 243 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 ZBTB8BQ8NAP8 495 aaPredicted RBP12.59□□□□□ -0.39
SPG11-203ENST00000535302 CPXM1Q96SM3 734 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 GPR20Q99678 358 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 HTATIP2Q9BUP3 242 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 LMAN2LQ9H0V9 348 aa12.59□□□□□ -0.39
SPG11-203ENST00000535302 KAT6AQ92794 2004 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms