RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 ACSL6Q9UKU0 697 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 PLAAQ9Y263 795 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 SLC17A4Q9Y2C5 497 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 A0A0J9YYE9 177 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 A0A0U1RQS6 177 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 C3orf70A6NLC5 250 aaPredicted RBP10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 ZNF487B1APH4 448 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 D6RAR5 112 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 PDE2AO00408 941 aaPredicted RBP10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 NVLO15381 856 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 NUDT21O43809 227 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 TRBC1P01850 177 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 FGF1P05230 155 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 TMEM253P0C7T8 217 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 CCNB1P14635 433 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 ZNF30P17039 623 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 PTMSP20962 102 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 KDELR1P24390 212 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 NFKBIAP25963 317 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 CCKBRP32239 447 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 POLE2P56282 527 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 B4GALNT1Q00973 533 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 NIPAL4Q0D2K0 466 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 KCNAB2Q13303 367 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 NR1D2Q14995 579 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 TSR1Q2NL82 804 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 C14orf28Q4W4Y0 310 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 SPECC1LQ69YQ0 1117 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 TIGD7Q6NT04 549 aaPredicted RBP10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 BORAQ6PGQ7 559 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 RFLNAQ6ZTI6 216 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 Q6ZVL8 140 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 HEATR4Q86WZ0 1026 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 ZFAND4Q86XD8 727 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 VSIG1Q86XK7 387 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 KCTD6Q8NC69 237 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 FAM46DQ8NEK8 389 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 OR8K1Q8NGG5 319 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 RAPGEF5Q92565 580 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 HDAC11Q96DB2 347 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 SMIM14Q96QK8 99 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 LYSMD1Q96S90 227 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 POLR1EQ9GZS1 481 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 ABCG8Q9H221 673 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 PHPT1Q9NRX4 125 aaPredicted RBP10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 SPATS2LQ9NUQ6 558 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 TRNAU1APQ9NX07 287 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 DTLQ9NZJ0 730 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 CTTNBP2NLQ9P2B4 639 aa10.03□□□□□ -0.8
CLSTN3-203ENST00000534830 PRAMEF33A0A0G2JMD5 474 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 TMX2-CTNND1H3BSU7 103 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 PRAMEF10O60809 474 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 MTA2O94776 668 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 MAP3K6O95382 1288 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 RPLP0P05388 317 aaKnown RBP10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 HLA-DQB2P05538 268 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 IVLP07476 585 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 MMP2P08253 660 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 KRT7P08729 469 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 CTPS1P17812 591 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 STC1P52823 247 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 DSC2Q02487 901 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 GBE1Q04446 702 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 TRIM14Q14142 442 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 ARHGEF7Q14155 803 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 LRRC66Q68CR7 880 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 DENND2CQ68D51 928 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 ADAMTSL4Q6UY14 1074 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 USP45Q70EL2 814 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 ZNF765Q7L2R6 523 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 TMPRSS9Q7Z410 1059 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 ZNF438Q7Z4V0 828 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 SPRED1Q7Z699 444 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 CCNJLQ8IV13 435 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 VSTM4Q8IW00 320 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 MAP7D3Q8IWC1 876 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 PLD5Q8N7P1 536 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 SLC35G2Q8TBE7 412 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 LRRN4Q8WUT4 740 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 CTNNBL1Q8WYA6 563 aaPredicted RBP10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 COX14Q96I36 57 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 RNF157Q96PX1 679 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 GFM1Q96RP9 751 aaKnown RBP10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 WDR24Q96S15 920 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 CHP1Q99653 195 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 TDRD1Q9BXT4 1180 aaKnown RBP10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 ZNF71Q9NQZ8 489 aaPredicted RBP10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 RBM22Q9NW64 420 aaKnown RBP eCLIP10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 LRIT1Q9P2V4 623 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 SUFUQ9UMX1 484 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 CHKBQ9Y259 395 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 RNF215Q9Y6U7 377 aa10.02□□□□□ -0.81
CLSTN3-203ENST00000534830 B4GAT1O43505 415 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 TPM3P06753 285 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 ITIH1P19827 911 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 MX2P20592 715 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 AK4P27144 223 aaPredicted RBP10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 ADCY8P40145 1251 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 ARHGAP25P42331 645 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 SSR1P43307 286 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms