RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 REM2Q8IYK8 340 aaPredicted RBP9.03□□□□□ -0.96
SF3B2-216ENST00000534765 TMEM86AQ8N2M4 240 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 ZCCHC9Q8N567 271 aaKnown RBP9.03□□□□□ -0.96
SF3B2-216ENST00000534765 TERB1Q8NA31 727 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 ST13P5Q8NFI4 369 aaPredicted RBP9.03□□□□□ -0.96
SF3B2-216ENST00000534765 OR52K2Q8NGK3 314 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 LRRC20Q8TCA0 184 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 TRIM63Q969Q1 353 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 ATP6V1E2Q96A05 226 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 SMARCD1Q96GM5 515 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 PAWRQ96IZ0 340 aaKnown RBP9.03□□□□□ -0.96
SF3B2-216ENST00000534765 CRISPLD2Q9H0B8 497 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 TKTL2Q9H0I9 626 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 CDH19Q9H159 772 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 NOL11Q9H8H0 719 aaKnown RBP9.03□□□□□ -0.96
SF3B2-216ENST00000534765 BRD7Q9NPI1 651 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 TMEM161AQ9NX61 479 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 KLQ9UEF7 1012 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 TBX21Q9UL17 535 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 PCDHGA11Q9Y5H2 935 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 CEP290O15078 2479 aa9.03□□□□□ -0.96
SF3B2-216ENST00000534765 STX16-NPEPL1H3BU86 382 aa9.02□□□□□ -0.96
SF3B2-216ENST00000534765 ARHGEF9O43307 516 aa9.02□□□□□ -0.96
SF3B2-216ENST00000534765 MTSS1O43312 755 aa9.02□□□□□ -0.96
SF3B2-216ENST00000534765 MTRF1O75570 445 aaKnown RBP9.02□□□□□ -0.96
SF3B2-216ENST00000534765 DLDP09622 509 aaKnown RBP9.02□□□□□ -0.96
SF3B2-216ENST00000534765 CD68P34810 354 aaPredicted RBP9.02□□□□□ -0.96
SF3B2-216ENST00000534765 NOS2P35228 1153 aa9.02□□□□□ -0.96
SF3B2-216ENST00000534765 ADRA1BP35368 520 aa9.02□□□□□ -0.96
SF3B2-216ENST00000534765 RAB15P59190 212 aa9.02□□□□□ -0.96
SF3B2-216ENST00000534765 ZNF846Q147U1 533 aa9.02□□□□□ -0.96
SF3B2-216ENST00000534765 STILQ15468 1287 aa9.02□□□□□ -0.96
SF3B2-216ENST00000534765 HADHQ16836 314 aaKnown RBP9.02□□□□□ -0.96
SF3B2-216ENST00000534765 GLB1LQ6UWU2 654 aa9.02□□□□□ -0.96
SF3B2-216ENST00000534765 KCTD8Q6ZWB6 473 aa9.02□□□□□ -0.96
SF3B2-216ENST00000534765 NECAB2Q7Z6G3 386 aa9.02□□□□□ -0.96
SF3B2-216ENST00000534765 SLCO6A1Q86UG4 719 aa9.02□□□□□ -0.96
SF3B2-216ENST00000534765 SCN4BQ8IWT1 228 aa9.02□□□□□ -0.96
SF3B2-216ENST00000534765 PCYOX1LQ8NBM8 494 aa9.02□□□□□ -0.96
SF3B2-216ENST00000534765 TBC1D15Q8TC07 691 aa9.02□□□□□ -0.96
SF3B2-216ENST00000534765 RNF139Q8WU17 664 aa9.02□□□□□ -0.96
SF3B2-216ENST00000534765 CHPT1Q8WUD6 406 aa9.02□□□□□ -0.96
SF3B2-216ENST00000534765 ATXN7L3BQ96GX2 97 aa9.02□□□□□ -0.96
SF3B2-216ENST00000534765 COLEC11Q9BWP8 271 aa9.02□□□□□ -0.96
SF3B2-216ENST00000534765 ZNF696Q9H7X3 374 aa9.02□□□□□ -0.96
SF3B2-216ENST00000534765 LRRC4Q9HBW1 653 aa9.02□□□□□ -0.96
SF3B2-216ENST00000534765 MPP6Q9NZW5 540 aa9.02□□□□□ -0.96
SF3B2-216ENST00000534765 ADAM28Q9UKQ2 775 aa9.02□□□□□ -0.96
SF3B2-216ENST00000534765 RWDD3Q9Y3V2 267 aa9.02□□□□□ -0.96
SF3B2-216ENST00000534765 ATG2AQ2TAZ0 1938 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 FAM149AA5PLN7 773 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 TFECO14948 347 aaPredicted RBP9.02□□□□□ -0.97
SF3B2-216ENST00000534765 KRT37O76014 449 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 LRIG2O94898 1065 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 EOMESO95936 686 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 APOA1P02647 267 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 SLC4A1P02730 911 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 CXCL10P02778 98 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 GLULP15104 373 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 EPHA3P29320 983 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 PRPSAP1Q14558 356 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 IGSF11Q5DX21 431 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 DARS2Q6PI48 645 aaKnown RBP9.02□□□□□ -0.97
SF3B2-216ENST00000534765 ANKRD33Q7Z3H0 272 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 PCDH20Q8N6Y1 951 aaKnown RBP9.02□□□□□ -0.97
SF3B2-216ENST00000534765 LRTOMTQ8WZ04 291 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 CNDP1Q96KN2 507 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 PCDH9Q9HC56 1237 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 ATP6V1HQ9UI12 483 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 FBXW11Q9UKB1 542 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 PNMA8BQ9ULN7 279 aaPredicted RBP9.02□□□□□ -0.97
SF3B2-216ENST00000534765 PCDHB8Q9UN66 801 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 SLC8A2Q9UPR5 921 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 TBX1O43435 398 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 XRCC1P18887 633 aaPredicted RBP9.02□□□□□ -0.97
SF3B2-216ENST00000534765 ITIH1P19827 911 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 GRIK1P39086 918 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 OPRL1P41146 370 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 ZIK1Q3SY52 487 aaPredicted RBP9.02□□□□□ -0.97
SF3B2-216ENST00000534765 ZBED5Q49AG3 693 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 TRMT10BQ6PF06 316 aaKnown RBP9.02□□□□□ -0.97
SF3B2-216ENST00000534765 ARCQ7LC44 396 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 IFNEQ86WN2 208 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 TNS4Q8IZW8 715 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 TTYH2Q9BSA4 534 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 RBM38Q9H0Z9 239 aaKnown RBP9.02□□□□□ -0.97
SF3B2-216ENST00000534765 IL1RL2Q9HB29 575 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 RC3H2Q9HBD1 1191 aaKnown RBP9.02□□□□□ -0.97
SF3B2-216ENST00000534765 ZDHHC7Q9NXF8 308 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 ZNF221Q9UK13 617 aa9.02□□□□□ -0.97
SF3B2-216ENST00000534765 A8MUA0 341 aa9.01□□□□□ -0.97
SF3B2-216ENST00000534765 TM9SF1O15321 606 aa9.01□□□□□ -0.97
SF3B2-216ENST00000534765 GSNP06396 782 aa9.01□□□□□ -0.97
SF3B2-216ENST00000534765 ABCB1P08183 1280 aaPredicted RBP9.01□□□□□ -0.97
SF3B2-216ENST00000534765 ALOX5P09917 674 aa9.01□□□□□ -0.97
SF3B2-216ENST00000534765 ERCC2P18074 760 aa9.01□□□□□ -0.97
SF3B2-216ENST00000534765 HPCAL1P37235 193 aa9.01□□□□□ -0.97
SF3B2-216ENST00000534765 DUSP4Q13115 394 aa9.01□□□□□ -0.97
SF3B2-216ENST00000534765 PIK3R6Q5UE93 754 aa9.01□□□□□ -0.97
SF3B2-216ENST00000534765 FAM219BQ5XKK7 198 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms