RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 ZRANB2O95218 330 aaKnown RBP eCLIP23.15■■□□□ 1.3
YIF1A-213ENST00000534374 CCKBRP32239 447 aa23.15■■□□□ 1.3
YIF1A-213ENST00000534374 CYLC1P35663 651 aaPredicted RBP23.15■■□□□ 1.3
YIF1A-213ENST00000534374 DYNLT1P63172 113 aa23.15■■□□□ 1.3
YIF1A-213ENST00000534374 PYCR3Q53H96 274 aa23.15■■□□□ 1.3
YIF1A-213ENST00000534374 SOWAHCQ53LP3 525 aaPredicted RBP23.15■■□□□ 1.3
YIF1A-213ENST00000534374 SFTPA2Q8IWL1 248 aa23.15■■□□□ 1.3
YIF1A-213ENST00000534374 RCOR2Q8IZ40 523 aa23.15■■□□□ 1.3
YIF1A-213ENST00000534374 PANX2Q96RD6 677 aa23.15■■□□□ 1.3
YIF1A-213ENST00000534374 TRIB3Q96RU7 358 aa23.15■■□□□ 1.3
YIF1A-213ENST00000534374 WDR24Q96S15 920 aa23.15■■□□□ 1.3
YIF1A-213ENST00000534374 STRADBQ9C0K7 418 aa23.15■■□□□ 1.3
YIF1A-213ENST00000534374 CDH19Q9H159 772 aa23.15■■□□□ 1.3
YIF1A-213ENST00000534374 PRORYQ9H606 182 aa23.15■■□□□ 1.3
YIF1A-213ENST00000534374 ST14Q9Y5Y6 855 aa23.15■■□□□ 1.3
YIF1A-213ENST00000534374 BPTFQ12830 3046 aa23.15■■□□□ 1.3
YIF1A-213ENST00000534374 AHCTF1Q8WYP5 2266 aa23.15■■□□□ 1.3
YIF1A-213ENST00000534374 ZW10O43264 779 aa23.14■■□□□ 1.29
YIF1A-213ENST00000534374 CST8O60676 142 aa23.14■■□□□ 1.29
YIF1A-213ENST00000534374 AK4P27144 223 aaPredicted RBP23.14■■□□□ 1.29
YIF1A-213ENST00000534374 INHBCP55103 352 aa23.14■■□□□ 1.29
YIF1A-213ENST00000534374 B4GALNT1Q00973 533 aa23.14■■□□□ 1.29
YIF1A-213ENST00000534374 TLE3Q04726 772 aa23.14■■□□□ 1.29
YIF1A-213ENST00000534374 CCDC173Q0VFZ6 552 aa23.14■■□□□ 1.29
YIF1A-213ENST00000534374 TFDP3Q5H9I0 405 aa23.14■■□□□ 1.29
YIF1A-213ENST00000534374 HENMT1Q5T8I9 393 aaKnown RBP23.14■■□□□ 1.29
YIF1A-213ENST00000534374 DOK6Q6PKX4 331 aa23.14■■□□□ 1.29
YIF1A-213ENST00000534374 SPOCD1Q6ZMY3 1216 aa23.14■■□□□ 1.29
YIF1A-213ENST00000534374 SPRED1Q7Z699 444 aa23.14■■□□□ 1.29
YIF1A-213ENST00000534374 SPACA3Q8IXA5 215 aa23.14■■□□□ 1.29
YIF1A-213ENST00000534374 KATNAL2Q8IYT4 538 aa23.14■■□□□ 1.29
YIF1A-213ENST00000534374 Q8N9G6 341 aaPredicted RBP23.14■■□□□ 1.29
YIF1A-213ENST00000534374 MRFAP1L1Q96HT8 127 aa23.14■■□□□ 1.29
YIF1A-213ENST00000534374 CALR3Q96L12 384 aaKnown RBP23.14■■□□□ 1.29
YIF1A-213ENST00000534374 TEKT5Q96M29 485 aa23.14■■□□□ 1.29
YIF1A-213ENST00000534374 OR2M4Q96R27 311 aa23.14■■□□□ 1.29
YIF1A-213ENST00000534374 SRPK1Q96SB4 655 aaKnown RBP23.14■■□□□ 1.29
YIF1A-213ENST00000534374 DPH1Q9BZG8 443 aa23.14■■□□□ 1.29
YIF1A-213ENST00000534374 SUDS3Q9H7L9 328 aaPredicted RBP23.14■■□□□ 1.29
YIF1A-213ENST00000534374 ZFYVE1Q9HBF4 777 aa23.14■■□□□ 1.29
YIF1A-213ENST00000534374 MAGEE1Q9HCI5 957 aa23.14■■□□□ 1.29
YIF1A-213ENST00000534374 SEPT10Q9P0V9 454 aa23.14■■□□□ 1.29
YIF1A-213ENST00000534374 VPS18Q9P253 973 aa23.14■■□□□ 1.29
YIF1A-213ENST00000534374 CNOT6Q9ULM6 557 aaKnown RBP23.14■■□□□ 1.29
YIF1A-213ENST00000534374 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.14■■□□□ 1.29
YIF1A-213ENST00000534374 CDRT15L2A8MXV6 281 aa23.13■■□□□ 1.29
YIF1A-213ENST00000534374 MTSS1O43312 755 aa23.13■■□□□ 1.29
YIF1A-213ENST00000534374 CDK18Q07002 472 aa23.13■■□□□ 1.29
YIF1A-213ENST00000534374 ZFP36L1Q07352 338 aaKnown RBP23.13■■□□□ 1.29
YIF1A-213ENST00000534374 LRP8Q14114 963 aa23.13■■□□□ 1.29
YIF1A-213ENST00000534374 NR1D2Q14995 579 aa23.13■■□□□ 1.29
YIF1A-213ENST00000534374 PRKD1Q15139 912 aaPredicted RBP23.13■■□□□ 1.29
YIF1A-213ENST00000534374 CLPPQ16740 277 aaPredicted RBP23.13■■□□□ 1.29
YIF1A-213ENST00000534374 C11orf63Q6NUN7 778 aa23.13■■□□□ 1.29
YIF1A-213ENST00000534374 SLC30A9Q6PML9 568 aa23.13■■□□□ 1.29
YIF1A-213ENST00000534374 ZNF438Q7Z4V0 828 aa23.13■■□□□ 1.29
YIF1A-213ENST00000534374 B3GNT8Q7Z7M8 397 aa23.13■■□□□ 1.29
YIF1A-213ENST00000534374 TFB1MQ8WVM0 346 aaKnown RBP23.13■■□□□ 1.29
YIF1A-213ENST00000534374 CCDC97Q96F63 343 aaPredicted RBP23.13■■□□□ 1.29
YIF1A-213ENST00000534374 CEP41Q9BYV8 373 aa23.13■■□□□ 1.29
YIF1A-213ENST00000534374 GLOD4Q9HC38 313 aa23.13■■□□□ 1.29
YIF1A-213ENST00000534374 SAE1Q9UBE0 346 aaPredicted RBP23.13■■□□□ 1.29
YIF1A-213ENST00000534374 EPN1Q9Y6I3 576 aaPredicted RBP23.13■■□□□ 1.29
YIF1A-213ENST00000534374 PLD2O14939 933 aa23.12■■□□□ 1.29
YIF1A-213ENST00000534374 B4GAT1O43505 415 aa23.12■■□□□ 1.29
YIF1A-213ENST00000534374 ECEL1O95672 775 aa23.12■■□□□ 1.29
YIF1A-213ENST00000534374 ITGA2BP08514 1039 aa23.12■■□□□ 1.29
YIF1A-213ENST00000534374 PTPN3P26045 913 aa23.12■■□□□ 1.29
YIF1A-213ENST00000534374 GPR3P46089 330 aa23.12■■□□□ 1.29
YIF1A-213ENST00000534374 ZNF75DP51815 510 aa23.12■■□□□ 1.29
YIF1A-213ENST00000534374 CCDC70Q6NSX1 233 aa23.12■■□□□ 1.29
YIF1A-213ENST00000534374 RAB11FIP2Q7L804 512 aa23.12■■□□□ 1.29
YIF1A-213ENST00000534374 TMC3Q7Z5M5 1100 aa23.12■■□□□ 1.29
YIF1A-213ENST00000534374 CLEC14AQ86T13 490 aa23.12■■□□□ 1.29
YIF1A-213ENST00000534374 GALNT13Q8IUC8 556 aa23.12■■□□□ 1.29
YIF1A-213ENST00000534374 TMTC1Q8IUR5 882 aa23.12■■□□□ 1.29
YIF1A-213ENST00000534374 NAGSQ8N159 534 aa23.12■■□□□ 1.29
YIF1A-213ENST00000534374 FBXO39Q8N4B4 442 aa23.12■■□□□ 1.29
YIF1A-213ENST00000534374 P3H4Q92791 437 aa23.12■■□□□ 1.29
YIF1A-213ENST00000534374 TMEM159Q96B96 161 aa23.12■■□□□ 1.29
YIF1A-213ENST00000534374 EID2BQ96D98 161 aa23.12■■□□□ 1.29
YIF1A-213ENST00000534374 CRELD1Q96HD1 420 aa23.12■■□□□ 1.29
YIF1A-213ENST00000534374 RMI1Q9H9A7 625 aa23.12■■□□□ 1.29
YIF1A-213ENST00000534374 RAD18Q9NS91 495 aa23.12■■□□□ 1.29
YIF1A-213ENST00000534374 EIF4E1BA6NMX2 242 aaKnown RBP23.11■■□□□ 1.29
YIF1A-213ENST00000534374 RHPN2P1A8MT19 583 aa23.11■■□□□ 1.29
YIF1A-213ENST00000534374 INPP4BO15327 924 aa23.11■■□□□ 1.29
YIF1A-213ENST00000534374 TNFSF15O95150 251 aa23.11■■□□□ 1.29
YIF1A-213ENST00000534374 ASMTLO95671 621 aa23.11■■□□□ 1.29
YIF1A-213ENST00000534374 FECHP22830 423 aa23.11■■□□□ 1.29
YIF1A-213ENST00000534374 ACTR1BP42025 376 aa23.11■■□□□ 1.29
YIF1A-213ENST00000534374 MAZP56270 477 aaKnown RBP23.11■■□□□ 1.29
YIF1A-213ENST00000534374 ACTR1AP61163 376 aa23.11■■□□□ 1.29
YIF1A-213ENST00000534374 GALNT3Q14435 633 aa23.11■■□□□ 1.29
YIF1A-213ENST00000534374 KAZNQ674X7 775 aa23.11■■□□□ 1.29
YIF1A-213ENST00000534374 LYSMD3Q7Z3D4 306 aa23.11■■□□□ 1.29
YIF1A-213ENST00000534374 TRIM74Q86UV6 250 aa23.11■■□□□ 1.29
YIF1A-213ENST00000534374 KCNE4Q8WWG9 221 aa23.11■■□□□ 1.29
YIF1A-213ENST00000534374 VAT1Q99536 393 aa23.11■■□□□ 1.29
YIF1A-213ENST00000534374 FOXP3Q9BZS1 431 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms