RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 PCDHGB3Q9Y5G1 929 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 IQCF5A8MTL0 148 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 NRP1O14786 923 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 MATN4O95460 622 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 TOP3BO95985 862 aaKnown RBP6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 IDO1P14902 403 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 WARSP23381 471 aaKnown RBP6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 CCND3P30281 292 aaPredicted RBP6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 HNRNPH3P31942 346 aaKnown RBP6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 GRIA3P42263 894 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 GABRB2P47870 512 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 APLP1P51693 650 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 RABGGTBP53611 331 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 DSC2Q02487 901 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 GBE1Q04446 702 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 AMZ1Q400G9 498 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 TCEAL5Q5H9L2 206 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 RNASEH2BQ5TBB1 312 aaKnown RBP6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 CMC1Q7Z7K0 106 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 ECHDC2Q86YB7 292 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 IZUMO1Q8IYV9 350 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 ADAMTS15Q8TE58 950 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 SH3RF2Q8TEC5 729 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 SLC22A17Q8WUG5 538 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 ZNF354BQ96LW1 612 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 KLHL32Q96NJ5 620 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 OLFM1Q99784 485 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 C6orf62Q9GZU0 229 aaPredicted RBP6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 SPAG4Q9NPE6 437 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 ARHGEF3Q9NR81 526 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 ABCB8Q9NUT2 735 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 ASB3Q9Y575 518 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 ABHD14A-ACY1A0A1B0GW23 586 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 WNT7AO00755 349 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 CLDN4O14493 209 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 BIRC5O15392 142 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 LRIG2O94898 1065 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 MED26O95402 600 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 PRAMEF1O95521 474 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 SHBGP04278 402 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 CMPK1P30085 196 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 UAP1L1Q3KQV9 507 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 XKR4Q5GH76 650 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 TPGS2Q68CL5 300 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 ZNF57Q68EA5 555 aaPredicted RBP6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 CNKSR3Q6P9H4 555 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 FAM129CQ86XR2 697 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 APLFQ8IW19 511 aaPredicted RBP6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 OR4A15Q8NGL6 344 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 PTCD2Q8WV60 388 aaKnown RBP6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 PTCD3Q96EY7 689 aaKnown RBP6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 FUBP3Q96I24 572 aaKnown RBP eCLIP6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 C5orf34Q96MH7 638 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 SH3GL3Q99963 347 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 TRMT61BQ9BVS5 477 aaKnown RBP6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 CAB39LQ9H9S4 337 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 ZNF214Q9UL59 606 aaPredicted RBP6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 PCDHGC3Q9UN70 934 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 MYRFQ9Y2G1 1151 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 GSTK1Q9Y2Q3 226 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 IGLV3-22A0A075B6J6 115 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 OR10H3O60404 316 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 C22orf31O95567 290 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 BCL10O95999 233 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 COX4I1P13073 169 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 SLC6A2P23975 617 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 TMED10P49755 219 aaKnown RBP6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 UGT2B15P54855 530 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 NAE1Q13564 534 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 CCNYL2Q5T2Q4 361 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 CPTPQ5TA50 214 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 HECTD2Q5U5R9 776 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 DUPD1Q68J44 220 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 CAMK1DQ8IU85 385 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 C8orf59Q8N0T1 100 aaPredicted RBP6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 TTC29Q8NA56 475 aaPredicted RBP6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 SLC4A11Q8NBS3 891 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 RAD51AP1Q96B01 352 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 SHDQ96IW2 340 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 JSRP1Q96MG2 331 aaPredicted RBP6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 PWWP2AQ96N64 755 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 SLC25A51Q9H1U9 297 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 OSER1Q9NX31 292 aa6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 POLR3HQ9Y535 204 aaPredicted RBP6.37□□□□□ -1.39
UBQLN1-206ENST00000533705 ARHGEF28Q8N1W1 1705 aaKnown RBP6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 CPED1A4D0V7 1026 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 RGSL1A5PLK6 1076 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 FZD9O00144 591 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 INSIG1O15503 277 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 LRCH4O75427 683 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 STK16O75716 305 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 TPSB2P20231 275 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 NT5EP21589 574 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 BLKP51451 505 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 TNK2Q07912 1038 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 TPSAB1Q15661 275 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 TIMM50Q3ZCQ8 353 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 BTN2A1Q7KYR7 527 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 LPCAT2Q7L5N7 544 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 DNAJB7Q7Z6W7 309 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms