RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 FRMD7Q6ZUT3 714 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 TRIM74Q86UV6 250 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 TRIM73Q86UV7 250 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 TMEM25Q86YD3 366 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 FAM161BQ96MY7 647 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 LENG8Q96PV6 779 aaPredicted RBP11.9□□□□□ -0.5
CLP1-205ENST00000533682 TSR3Q9UJK0 312 aaKnown RBP11.9□□□□□ -0.5
CLP1-205ENST00000533682 LSM7Q9UK45 103 aaKnown RBP11.9□□□□□ -0.5
CLP1-205ENST00000533682 TRAV19A0A0A6YYK7 116 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 TRIM24O15164 1050 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 NIPSNAP2O75323 286 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 NDUFS3O75489 264 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 RHOBTB1O94844 696 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 MYOGP15173 224 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 HLA-FP30511 346 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 SLC7A9P82251 487 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 SULT2A1Q06520 285 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 PDAP1Q13442 181 aaKnown RBP11.9□□□□□ -0.5
CLP1-205ENST00000533682 CLEC6AQ6EIG7 209 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 ASTLQ6HA08 431 aaPredicted RBP11.9□□□□□ -0.5
CLP1-205ENST00000533682 ZNF783Q6ZMS7 281 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 ZSWIM9Q86XI8 627 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 LMNTD2Q8IXW0 634 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 GALNT15Q8N3T1 639 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 DCAF4L2Q8NA75 395 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 ZFAND2BQ8WV99 257 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 PIH1D2Q8WWB5 315 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 CATSPER2Q96P56 530 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 GPR21Q99679 349 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 LINC00597Q9H2U6 94 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 ASAH2Q9NR71 780 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 ABCB8Q9NUT2 735 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 CHCHD3Q9NX63 227 aaKnown RBP11.9□□□□□ -0.5
CLP1-205ENST00000533682 ASB3Q9Y575 518 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 INSL6Q9Y581 213 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 SLC4A7Q9Y6M7 1214 aa11.9□□□□□ -0.5
CLP1-205ENST00000533682 SMIM24O75264 130 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 SUPT7LO94864 414 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 LATS1O95835 1130 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 GLUD1P00367 558 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 PYGLP06737 847 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 RBP1P09455 135 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 MTHFD2P13995 350 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 SYN1P17600 705 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 OGNP20774 298 aaKnown RBP11.89□□□□□ -0.51
CLP1-205ENST00000533682 CTNNB1P35222 781 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 LBX1P52954 281 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 DNAJB13P59910 316 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 C1QTNF8P60827 252 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 KLF10Q13118 480 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 CBX2Q14781 532 aaPredicted RBP11.89□□□□□ -0.51
CLP1-205ENST00000533682 TEAD2Q15562 447 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 AFTPHQ6ULP2 937 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 TAS2R42Q7RTR8 314 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 PIWIL4Q7Z3Z4 852 aaKnown RBP11.89□□□□□ -0.51
CLP1-205ENST00000533682 MRPL43Q8N983 215 aaKnown RBP11.89□□□□□ -0.51
CLP1-205ENST00000533682 SNX31Q8N9S9 440 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 SIDT2Q8NBJ9 832 aaKnown RBP11.89□□□□□ -0.51
CLP1-205ENST00000533682 POF1BQ8WVV4 589 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 VOPP1Q96AW1 172 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 NSUN5Q96P11 429 aaKnown RBP11.89□□□□□ -0.51
CLP1-205ENST00000533682 C17orf80Q9BSJ5 609 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 C2orf49Q9BVC5 232 aaPredicted RBP11.89□□□□□ -0.51
CLP1-205ENST00000533682 GSTO2Q9H4Y5 243 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 RIMKLBQ9ULI2 386 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 A0A1B0GTL3 188 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 CDC7O00311 574 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 PER2O15055 1255 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 NPHS1O60500 1241 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 EN2P19622 333 aaPredicted RBP11.89□□□□□ -0.51
CLP1-205ENST00000533682 CCNG1P51959 295 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 XIAPP98170 497 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 PPP1R3AQ16821 1122 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 PFKFB4Q16877 469 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 PLEKHG6Q3KR16 790 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 CTSL3PQ5NE16 218 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 TMEM240Q5SV17 173 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 PAF1Q8N7H5 531 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 ST13P5Q8NFI4 369 aaPredicted RBP11.89□□□□□ -0.51
CLP1-205ENST00000533682 GPR63Q9BZJ6 419 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 SARS2Q9NP81 518 aaKnown RBP11.89□□□□□ -0.51
CLP1-205ENST00000533682 IL17CQ9P0M4 197 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 PACSIN3Q9UKS6 424 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 SORCS3Q9UPU3 1222 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 SSX2IPQ9Y2D8 614 aa11.89□□□□□ -0.51
CLP1-205ENST00000533682 ATP6AP2A0A1C7CYW4 349 aa11.88□□□□□ -0.51
CLP1-205ENST00000533682 NCF1BA6NI72 391 aaPredicted RBP11.88□□□□□ -0.51
CLP1-205ENST00000533682 NCF1CA8MVU1 366 aaPredicted RBP11.88□□□□□ -0.51
CLP1-205ENST00000533682 TLL1O43897 1013 aa11.88□□□□□ -0.51
CLP1-205ENST00000533682 MOSPD3O75425 235 aa11.88□□□□□ -0.51
CLP1-205ENST00000533682 ATP6AP2O75787 350 aa11.88□□□□□ -0.51
CLP1-205ENST00000533682 KRT36O76013 467 aa11.88□□□□□ -0.51
CLP1-205ENST00000533682 PGLSO95336 258 aa11.88□□□□□ -0.51
CLP1-205ENST00000533682 CLDN7O95471 211 aa11.88□□□□□ -0.51
CLP1-205ENST00000533682 NCF1P14598 390 aaPredicted RBP11.88□□□□□ -0.51
CLP1-205ENST00000533682 EPCAMP16422 314 aa11.88□□□□□ -0.51
CLP1-205ENST00000533682 CES1P23141 567 aa11.88□□□□□ -0.51
CLP1-205ENST00000533682 SUOXP51687 545 aa11.88□□□□□ -0.51
CLP1-205ENST00000533682 KPNA2P52292 529 aaKnown RBP11.88□□□□□ -0.51
CLP1-205ENST00000533682 COPAP53621 1224 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms