RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 SPATA16Q9BXB7 569 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 FRMD8Q9BZ67 464 aaPredicted RBP11.92□□□□□ -0.5
SSBP3-214ENST00000533209 IL26Q9NPH9 171 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 CASS4Q9NQ75 786 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 EIF2B3Q9NR50 452 aaKnown RBP11.92□□□□□ -0.5
SSBP3-214ENST00000533209 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.92□□□□□ -0.5
SSBP3-214ENST00000533209 KLQ9UEF7 1012 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 BTBD3Q9Y2F9 522 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 TCRBV7S3A2A0A539 114 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 DCDC2BA2VCK2 349 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 C2orf81A6NN90 581 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 GAPDHSO14556 408 aaPredicted RBP11.91□□□□□ -0.5
SSBP3-214ENST00000533209 INPP4BO15327 924 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 STX7O15400 261 aaKnown RBP11.91□□□□□ -0.5
SSBP3-214ENST00000533209 FLRT2O43155 660 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 LDB2O43679 373 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 CBFA2T3O75081 653 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 PPFIA2O75334 1257 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 RASGRP1O95267 797 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 ECEL1O95672 775 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 CRTAMO95727 393 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 GAS8O95995 478 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 FUCA1P04066 466 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 CEACAM5P06731 702 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 CSRP1P21291 193 aaKnown RBP11.91□□□□□ -0.5
SSBP3-214ENST00000533209 LPOP22079 712 aaPredicted RBP11.91□□□□□ -0.5
SSBP3-214ENST00000533209 KELP23276 732 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 PTGIRP43119 386 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 MAGEA6P43360 314 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 ZNF140P52738 457 aaPredicted RBP11.91□□□□□ -0.5
SSBP3-214ENST00000533209 HK3P52790 923 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 PPARDQ03181 441 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 CDH17Q12864 832 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 GPS1Q13098 491 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 PUM1Q14671 1186 aaKnown RBP eCLIP11.91□□□□□ -0.5
SSBP3-214ENST00000533209 ZDHHC20Q5W0Z9 365 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 PPP1R21Q6ZMI0 780 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 HID1Q8IV36 788 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 TRAM1L1Q8N609 369 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 ZNF548Q8NEK5 533 aaPredicted RBP11.91□□□□□ -0.5
SSBP3-214ENST00000533209 OR4K2Q8NGD2 314 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 OR13C4Q8NGS5 318 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 DTX3LQ8TDB6 740 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 PTCD2Q8WV60 388 aaKnown RBP11.91□□□□□ -0.5
SSBP3-214ENST00000533209 SLCO2A1Q92959 643 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 PDXPQ96GD0 296 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 CAMK1GQ96NX5 476 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 ZSCAN5AQ9BUG6 496 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 MRPL40Q9NQ50 206 aaKnown RBP11.91□□□□□ -0.5
SSBP3-214ENST00000533209 APOBEC3BQ9UH17 382 aaKnown RBP11.91□□□□□ -0.5
SSBP3-214ENST00000533209 PCYOX1Q9UHG3 505 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 TMPRSS11EQ9UL52 423 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 TMEM98Q9Y2Y6 226 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 PKP3Q9Y446 797 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 OAS3Q9Y6K5 1087 aaKnown RBP11.91□□□□□ -0.5
SSBP3-214ENST00000533209 DGKBQ9Y6T7 804 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 TMEM131Q92545 1883 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 DCHS1Q96JQ0 3298 aa11.91□□□□□ -0.5
SSBP3-214ENST00000533209 PRSS38A1L453 326 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 H3BM21 787 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 CCDC188H7C350 402 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 SCAMP1O15126 338 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 GIMD1P0DJR0 217 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 TPSB2P20231 275 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 SPAM1P38567 509 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 GRK6P43250 576 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 ID4P47928 161 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 POLD2P49005 469 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 BLKP51451 505 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 CDK16Q00536 496 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 PDE1BQ01064 536 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 KCNJ11Q14654 390 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 POU6F1Q14863 301 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 TPSAB1Q15661 275 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 CHRNA6Q15825 494 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 ATP13A5Q4VNC0 1218 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 PRRT3Q5FWE3 981 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 CERCAMQ5T4B2 595 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 ANKRD22Q5VYY1 191 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 PDPK2PQ6A1A2 396 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 ZNF534Q76KX8 674 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 RD3Q7Z3Z2 195 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 KLHL7Q8IXQ5 586 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 DNAAF3Q8N9W5 541 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 DEFB124Q8NES8 71 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 BAHD1Q8TBE0 780 aaPredicted RBP11.9□□□□□ -0.5
SSBP3-214ENST00000533209 RHBDD1Q8TEB9 315 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 BTN2A2Q8WVV5 523 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 CPT1BQ92523 772 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 GLYATL1Q969I3 302 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 SCARF2Q96GP6 870 aaPredicted RBP11.9□□□□□ -0.5
SSBP3-214ENST00000533209 TBATAQ96M53 351 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 C19orf43Q9BQ61 176 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 LRRC61Q9BV99 259 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 SLC13A1Q9BZW2 595 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 CLPBQ9H078 707 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 CYP4F12Q9HCS2 524 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 SPASTQ9UBP0 616 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 FKBPLQ9UIM3 349 aa11.9□□□□□ -0.5
SSBP3-214ENST00000533209 PCOLCE2Q9UKZ9 415 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms