RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 BLOC1S5Q8TDH9 187 aa19.75■□□□□ 0.75
CPSF1-209ENST00000532725 COG1Q8WTW3 980 aa19.75■□□□□ 0.75
CPSF1-209ENST00000532725 SCARF2Q96GP6 870 aaPredicted RBP19.75■□□□□ 0.75
CPSF1-209ENST00000532725 OSBPL9Q96SU4 736 aa19.75■□□□□ 0.75
CPSF1-209ENST00000532725 TBL1YQ9BQ87 522 aa19.75■□□□□ 0.75
CPSF1-209ENST00000532725 DUSP23Q9BVJ7 150 aa19.75■□□□□ 0.75
CPSF1-209ENST00000532725 ETNK1Q9HBU6 452 aa19.75■□□□□ 0.75
CPSF1-209ENST00000532725 BPIFA1Q9NP55 256 aa19.75■□□□□ 0.75
CPSF1-209ENST00000532725 HOMER3Q9NSC5 361 aa19.75■□□□□ 0.75
CPSF1-209ENST00000532725 IL17CQ9P0M4 197 aa19.75■□□□□ 0.75
CPSF1-209ENST00000532725 GOLGA4Q13439 2230 aaKnown RBP19.74■□□□□ 0.75
CPSF1-209ENST00000532725 PRSS38A1L453 326 aa19.74■□□□□ 0.75
CPSF1-209ENST00000532725 LMO7DNF2Z398 122 aa19.74■□□□□ 0.75
CPSF1-209ENST00000532725 YY2O15391 372 aa19.74■□□□□ 0.75
CPSF1-209ENST00000532725 PSMD3O43242 534 aa19.74■□□□□ 0.75
CPSF1-209ENST00000532725 CELA2BP08218 269 aaPredicted RBP19.74■□□□□ 0.75
CPSF1-209ENST00000532725 FTH1P19P0C7X4 201 aa19.74■□□□□ 0.75
CPSF1-209ENST00000532725 CTSEP14091 401 aa19.74■□□□□ 0.75
CPSF1-209ENST00000532725 KCNJ1P48048 391 aa19.74■□□□□ 0.75
CPSF1-209ENST00000532725 POLD2P49005 469 aa19.74■□□□□ 0.75
CPSF1-209ENST00000532725 SDR16C5Q8N3Y7 309 aa19.74■□□□□ 0.75
CPSF1-209ENST00000532725 FSTL5Q8N475 847 aaPredicted RBP19.74■□□□□ 0.75
CPSF1-209ENST00000532725 TAB3Q8N5C8 712 aaPredicted RBP19.74■□□□□ 0.75
CPSF1-209ENST00000532725 PDCD7Q8N8D1 485 aaKnown RBP19.74■□□□□ 0.75
CPSF1-209ENST00000532725 FAM181AQ8N9Y4 354 aa19.74■□□□□ 0.75
CPSF1-209ENST00000532725 PTCD2Q8WV60 388 aaKnown RBP19.74■□□□□ 0.75
CPSF1-209ENST00000532725 CYP4F12Q9HCS2 524 aa19.74■□□□□ 0.75
CPSF1-209ENST00000532725 SNX12Q9UMY4 172 aa19.74■□□□□ 0.75
CPSF1-209ENST00000532725 TMEM98Q9Y2Y6 226 aa19.74■□□□□ 0.75
CPSF1-209ENST00000532725 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.74■□□□□ 0.75
CPSF1-209ENST00000532725 COL5A1P20908 1838 aaPredicted RBP19.74■□□□□ 0.75
CPSF1-209ENST00000532725 INPP4BO15327 924 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 AP2A1O95782 977 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 SLC4A1P02730 911 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 ZSCAN5DPP0CG00 497 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 ALPPL2P10696 532 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 CKMT2P17540 419 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 DNAJC3Q13217 504 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 ELOCQ15369 112 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 DEFB133Q30KQ1 61 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 ALS2CLQ60I27 953 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 GLT6D1Q7Z4J2 308 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 TRIM74Q86UV6 250 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 TRAM1L1Q8N609 369 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 PNPLA1Q8N8W4 532 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 DTX3LQ8TDB6 740 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 BRSK1Q8TDC3 778 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 ACTRT1Q8TDG2 376 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 PLEKHG4BQ96PX9 1271 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 ZSCAN5AQ9BUG6 496 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 SPATA16Q9BXB7 569 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 TMEM168Q9H0V1 697 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 LRRC40Q9H9A6 602 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 IL26Q9NPH9 171 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 KCND1Q9NSA2 647 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 FEZ2Q9UHY8 353 aaPredicted RBP19.73■□□□□ 0.75
CPSF1-209ENST00000532725 MOSPD1Q9UJG1 213 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 WASF3Q9UPY6 502 aa19.73■□□□□ 0.75
CPSF1-209ENST00000532725 APOBEC2Q9Y235 224 aaKnown RBP19.73■□□□□ 0.75
CPSF1-209ENST00000532725 LY6G6EA0A0G2JKS1 128 aa19.72■□□□□ 0.75
CPSF1-209ENST00000532725 CES2O00748 559 aa19.72■□□□□ 0.75
CPSF1-209ENST00000532725 BUD23O43709 281 aaKnown RBP19.72■□□□□ 0.75
CPSF1-209ENST00000532725 IVLP07476 585 aa19.72■□□□□ 0.75
CPSF1-209ENST00000532725 ANXA6P08133 673 aa19.72■□□□□ 0.75
CPSF1-209ENST00000532725 PMLP29590 882 aa19.72■□□□□ 0.75
CPSF1-209ENST00000532725 RPL22P35268 128 aaKnown RBP19.72■□□□□ 0.75
CPSF1-209ENST00000532725 ACTN2P35609 894 aa19.72■□□□□ 0.75
CPSF1-209ENST00000532725 FDFT1P37268 417 aa19.72■□□□□ 0.75
CPSF1-209ENST00000532725 GNG11P61952 73 aa19.72■□□□□ 0.75
CPSF1-209ENST00000532725 TAF1AQ15573 450 aaPredicted RBP19.72■□□□□ 0.75
CPSF1-209ENST00000532725 HS1BP3Q53T59 392 aa19.72■□□□□ 0.75
CPSF1-209ENST00000532725 LVRNQ6Q4G3 990 aa19.72■□□□□ 0.75
CPSF1-209ENST00000532725 CCDC89Q8N998 374 aa19.72■□□□□ 0.75
CPSF1-209ENST00000532725 LRRC45Q96CN5 670 aa19.72■□□□□ 0.75
CPSF1-209ENST00000532725 APOLD1Q96LR9 279 aa19.72■□□□□ 0.75
CPSF1-209ENST00000532725 CARS2Q9HA77 564 aaKnown RBP19.72■□□□□ 0.75
CPSF1-209ENST00000532725 PAK5Q9P286 719 aa19.72■□□□□ 0.75
CPSF1-209ENST00000532725 SUFUQ9UMX1 484 aa19.72■□□□□ 0.75
CPSF1-209ENST00000532725 KCTD3Q9Y597 815 aa19.72■□□□□ 0.75
CPSF1-209ENST00000532725 ARL5AQ9Y689 179 aa19.72■□□□□ 0.75
CPSF1-209ENST00000532725 OAS3Q9Y6K5 1087 aaKnown RBP19.72■□□□□ 0.75
CPSF1-209ENST00000532725 U3KQA8 63 aa19.72■□□□□ 0.75
CPSF1-209ENST00000532725 ERI2A8K979 691 aaKnown RBP19.71■□□□□ 0.75
CPSF1-209ENST00000532725 ZNF185O15231 689 aa19.71■□□□□ 0.75
CPSF1-209ENST00000532725 PPFIA2O75334 1257 aa19.71■□□□□ 0.75
CPSF1-209ENST00000532725 CKMT1AP12532 417 aa19.71■□□□□ 0.75
CPSF1-209ENST00000532725 LPOP22079 712 aaPredicted RBP19.71■□□□□ 0.75
CPSF1-209ENST00000532725 ACP1P24666 158 aa19.71■□□□□ 0.75
CPSF1-209ENST00000532725 PTPRCAPQ14761 206 aa19.71■□□□□ 0.75
CPSF1-209ENST00000532725 ZDHHC20Q5W0Z9 365 aa19.71■□□□□ 0.75
CPSF1-209ENST00000532725 PDPK2PQ6A1A2 396 aa19.71■□□□□ 0.75
CPSF1-209ENST00000532725 DOK6Q6PKX4 331 aa19.71■□□□□ 0.75
CPSF1-209ENST00000532725 GPBAR1Q8TDU6 330 aa19.71■□□□□ 0.75
CPSF1-209ENST00000532725 ADAMTS14Q8WXS8 1223 aa19.71■□□□□ 0.75
CPSF1-209ENST00000532725 NAP1L3Q99457 506 aaPredicted RBP19.71■□□□□ 0.75
CPSF1-209ENST00000532725 BOCQ9BWV1 1114 aa19.71■□□□□ 0.75
CPSF1-209ENST00000532725 AP1M1Q9BXS5 423 aa19.71■□□□□ 0.75
CPSF1-209ENST00000532725 TRNAU1APQ9NX07 287 aaKnown RBP19.71■□□□□ 0.75
CPSF1-209ENST00000532725 SMARCAL1Q9NZC9 954 aa19.71■□□□□ 0.75
CPSF1-209ENST00000532725 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms