RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 ARFGAP3Q9NP61 516 aa17.71■□□□□ 0.43
SMG1-203ENST00000532700 LRIT1Q9P2V4 623 aa17.71■□□□□ 0.43
SMG1-203ENST00000532700 SPO11Q9Y5K1 396 aa17.71■□□□□ 0.43
SMG1-203ENST00000532700 SMG1Q96Q15 3661 aaKnown RBP17.71■□□□□ 0.43
SMG1-203ENST00000532700 UNC13CQ8NB66 2214 aa17.7■□□□□ 0.42
SMG1-203ENST00000532700 CDRT15L2A8MXV6 281 aa17.7■□□□□ 0.42
SMG1-203ENST00000532700 ANKRD66B4E2M5 251 aa17.7■□□□□ 0.42
SMG1-203ENST00000532700 SPOPO43791 374 aa17.7■□□□□ 0.42
SMG1-203ENST00000532700 ECEL1O95672 775 aa17.7■□□□□ 0.42
SMG1-203ENST00000532700 IVLP07476 585 aa17.7■□□□□ 0.42
SMG1-203ENST00000532700 PTPN3P26045 913 aa17.7■□□□□ 0.42
SMG1-203ENST00000532700 SPINT3P49223 89 aa17.7■□□□□ 0.42
SMG1-203ENST00000532700 HADHBP55084 474 aaKnown RBP17.7■□□□□ 0.42
SMG1-203ENST00000532700 WASHC5Q12768 1159 aa17.7■□□□□ 0.42
SMG1-203ENST00000532700 PCSK7Q16549 785 aa17.7■□□□□ 0.42
SMG1-203ENST00000532700 PYCR3Q53H96 274 aa17.7■□□□□ 0.42
SMG1-203ENST00000532700 HENMT1Q5T8I9 393 aaKnown RBP17.7■□□□□ 0.42
SMG1-203ENST00000532700 KAZNQ674X7 775 aa17.7■□□□□ 0.42
SMG1-203ENST00000532700 ZNF765Q7L2R6 523 aa17.7■□□□□ 0.42
SMG1-203ENST00000532700 TMTC1Q8IUR5 882 aa17.7■□□□□ 0.42
SMG1-203ENST00000532700 ZDHHC1Q8WTX9 485 aa17.7■□□□□ 0.42
SMG1-203ENST00000532700 ZNF830Q96NB3 372 aaPredicted RBP17.7■□□□□ 0.42
SMG1-203ENST00000532700 EPB41L5Q9HCM4 733 aa17.7■□□□□ 0.42
SMG1-203ENST00000532700 UBP1Q9NZI7 540 aa17.7■□□□□ 0.42
SMG1-203ENST00000532700 APPL1Q9UKG1 709 aa17.7■□□□□ 0.42
SMG1-203ENST00000532700 SHOC2Q9UQ13 582 aa17.7■□□□□ 0.42
SMG1-203ENST00000532700 PCDHA13Q9Y5I0 950 aa17.7■□□□□ 0.42
SMG1-203ENST00000532700 DUSP10Q9Y6W6 482 aa17.7■□□□□ 0.42
SMG1-203ENST00000532700 hCG_1818297A0A087WSY0 165 aa17.69■□□□□ 0.42
SMG1-203ENST00000532700 A0A0U1RQJ8 604 aa17.69■□□□□ 0.42
SMG1-203ENST00000532700 AURKAO14965 403 aa17.69■□□□□ 0.42
SMG1-203ENST00000532700 CST8O60676 142 aa17.69■□□□□ 0.42
SMG1-203ENST00000532700 DNAJC6O75061 913 aa17.69■□□□□ 0.42
SMG1-203ENST00000532700 GLB1P16278 677 aa17.69■□□□□ 0.42
SMG1-203ENST00000532700 CES1P23141 567 aa17.69■□□□□ 0.42
SMG1-203ENST00000532700 CYLC1P35663 651 aaPredicted RBP17.69■□□□□ 0.42
SMG1-203ENST00000532700 SLC1A1P43005 524 aa17.69■□□□□ 0.42
SMG1-203ENST00000532700 PCBP4P57723 403 aaKnown RBP17.69■□□□□ 0.42
SMG1-203ENST00000532700 OR1D5P58170 312 aa17.69■□□□□ 0.42
SMG1-203ENST00000532700 RPL26P61254 145 aaKnown RBP17.69■□□□□ 0.42
SMG1-203ENST00000532700 RAD9BQ6WBX8 426 aa17.69■□□□□ 0.42
SMG1-203ENST00000532700 ZNF761Q86XN6 746 aaPredicted RBP17.69■□□□□ 0.42
SMG1-203ENST00000532700 ARL14Q8N4G2 192 aa17.69■□□□□ 0.42
SMG1-203ENST00000532700 GPR26Q8NDV2 337 aa17.69■□□□□ 0.42
SMG1-203ENST00000532700 ZNF578Q96N58 590 aaPredicted RBP17.69■□□□□ 0.42
SMG1-203ENST00000532700 OR2M4Q96R27 311 aa17.69■□□□□ 0.42
SMG1-203ENST00000532700 SEMA6CQ9H3T2 930 aa17.69■□□□□ 0.42
SMG1-203ENST00000532700 RDH14Q9HBH5 336 aa17.69■□□□□ 0.42
SMG1-203ENST00000532700 CPNE5Q9HCH3 593 aa17.69■□□□□ 0.42
SMG1-203ENST00000532700 LUC7LQ9NQ29 371 aaKnown RBP17.69■□□□□ 0.42
SMG1-203ENST00000532700 TRNAU1APQ9NX07 287 aaKnown RBP17.69■□□□□ 0.42
SMG1-203ENST00000532700 DDX56Q9NY93 547 aaKnown RBP17.69■□□□□ 0.42
SMG1-203ENST00000532700 RPL26L1Q9UNX3 145 aaKnown RBP17.69■□□□□ 0.42
SMG1-203ENST00000532700 CCDC187A0A096LP49 1063 aa17.68■□□□□ 0.42
SMG1-203ENST00000532700 PDE2AO00408 941 aaPredicted RBP17.68■□□□□ 0.42
SMG1-203ENST00000532700 PPM1DO15297 605 aa17.68■□□□□ 0.42
SMG1-203ENST00000532700 TNFSF15O95150 251 aa17.68■□□□□ 0.42
SMG1-203ENST00000532700 SLC4A1P02730 911 aa17.68■□□□□ 0.42
SMG1-203ENST00000532700 ITIH1P19827 911 aa17.68■□□□□ 0.42
SMG1-203ENST00000532700 FECHP22830 423 aa17.68■□□□□ 0.42
SMG1-203ENST00000532700 ETV5P41161 510 aa17.68■□□□□ 0.42
SMG1-203ENST00000532700 ACTR1BP42025 376 aa17.68■□□□□ 0.42
SMG1-203ENST00000532700 ACTR1AP61163 376 aa17.68■□□□□ 0.42
SMG1-203ENST00000532700 ILF3Q12906 894 aaKnown RBP eCLIP17.68■□□□□ 0.424e-6■■□□□ 12
SMG1-203ENST00000532700 PDK1Q15118 436 aa17.68■□□□□ 0.42
SMG1-203ENST00000532700 SPA17Q15506 151 aa17.68■□□□□ 0.42
SMG1-203ENST00000532700 ALS2CLQ60I27 953 aa17.68■□□□□ 0.42
SMG1-203ENST00000532700 IGF2-ASQ6U949 168 aa17.68■□□□□ 0.42
SMG1-203ENST00000532700 PCSK4Q6UW60 755 aa17.68■□□□□ 0.42
SMG1-203ENST00000532700 ZNF574Q6ZN55 896 aaPredicted RBP17.68■□□□□ 0.42
SMG1-203ENST00000532700 ZNF438Q7Z4V0 828 aa17.68■□□□□ 0.42
SMG1-203ENST00000532700 SLITRK4Q8IW52 837 aa17.68■□□□□ 0.42
SMG1-203ENST00000532700 SPC24Q8NBT2 197 aa17.68■□□□□ 0.42
SMG1-203ENST00000532700 LIN37Q96GY3 246 aaPredicted RBP17.68■□□□□ 0.42
SMG1-203ENST00000532700 FCRL3Q96P31 734 aaPredicted RBP17.68■□□□□ 0.42
SMG1-203ENST00000532700 GORASP1Q9BQQ3 440 aa17.68■□□□□ 0.42
SMG1-203ENST00000532700 NUDT22Q9BRQ3 303 aa17.68■□□□□ 0.42
SMG1-203ENST00000532700 MLPHQ9BV36 600 aaPredicted RBP17.68■□□□□ 0.42
SMG1-203ENST00000532700 MAK16Q9BXY0 300 aaKnown RBP17.68■□□□□ 0.42
SMG1-203ENST00000532700 GSDMCQ9BYG8 508 aa17.68■□□□□ 0.42
SMG1-203ENST00000532700 GLOD4Q9HC38 313 aa17.68■□□□□ 0.42
SMG1-203ENST00000532700 KCTD5Q9NXV2 234 aa17.68■□□□□ 0.42
SMG1-203ENST00000532700 TMPRSS11EQ9UL52 423 aa17.68■□□□□ 0.42
SMG1-203ENST00000532700 PCDHGA8Q9Y5G5 932 aa17.68■□□□□ 0.42
SMG1-203ENST00000532700 TRBV23OR9-2A0A075B6M9 112 aa17.67■□□□□ 0.42
SMG1-203ENST00000532700 RRP8O43159 456 aaKnown RBP17.67■□□□□ 0.42
SMG1-203ENST00000532700 PSTPIP1O43586 416 aa17.67■□□□□ 0.42
SMG1-203ENST00000532700 NUDT21O43809 227 aaKnown RBP17.67■□□□□ 0.42
SMG1-203ENST00000532700 PMPCBO75439 489 aa17.67■□□□□ 0.42
SMG1-203ENST00000532700 IPO7O95373 1038 aaKnown RBP17.67■□□□□ 0.42
SMG1-203ENST00000532700 PRB1P04280 392 aa17.67■□□□□ 0.42
SMG1-203ENST00000532700 NFKB1P19838 968 aa17.67■□□□□ 0.42
SMG1-203ENST00000532700 NFKBIAP25963 317 aa17.67■□□□□ 0.42
SMG1-203ENST00000532700 CSF2RBP32927 897 aa17.67■□□□□ 0.42
SMG1-203ENST00000532700 CA5AP35218 305 aa17.67■□□□□ 0.42
SMG1-203ENST00000532700 UGT1A5P35504 534 aa17.67■□□□□ 0.42
SMG1-203ENST00000532700 CHRNA4P43681 627 aa17.67■□□□□ 0.42
SMG1-203ENST00000532700 INHBCP55103 352 aa17.67■□□□□ 0.42
SMG1-203ENST00000532700 ERVPABLB-1P60509 514 aa17.67■□□□□ 0.42
SMG1-203ENST00000532700 CFHR1Q03591 330 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms