RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 KLHL28Q9NXS3 571 aa15.27■□□□□ 0.03
PCDHA3-202ENST00000532566 KCTD5Q9NXV2 234 aa15.27■□□□□ 0.03
PCDHA3-202ENST00000532566 USE1Q9NZ43 259 aa15.27■□□□□ 0.03
PCDHA3-202ENST00000532566 CYTH4Q9UIA0 394 aa15.27■□□□□ 0.03
PCDHA3-202ENST00000532566 GSSP48637 474 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 AP1S1P61966 158 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 PEX6Q13608 980 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 AP5B1Q2VPB7 878 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 ZIK1Q3SY52 487 aaPredicted RBP15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 ACSBG2Q5FVE4 666 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 XKR6Q5GH73 641 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 IFNLR1Q8IU57 520 aaPredicted RBP15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 FBXO22Q8NEZ5 403 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 BRD9Q9H8M2 597 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 PNPLA3Q9NST1 481 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 RPS6KA6Q9UK32 745 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 DUSP12Q9UNI6 340 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 SLC38A8A6NNN8 435 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 LIN7AO14910 233 aaPredicted RBP15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 RGS5O15539 181 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 SGTAO43765 313 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 TYROBPO43914 113 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 TBX18O95935 607 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 GPR1P46091 355 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 SULT2A1Q06520 285 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 ABRAXAS1Q6UWZ7 409 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 B3GNT6Q6ZMB0 384 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 OXSMQ9NWU1 459 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 FNIP2Q9P278 1114 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 GLUD1P00367 558 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 MPP2Q14168 576 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 RAET1GQ6H3X3 334 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 SERPINA13PQ6UXR4 307 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 UBE2R2Q712K3 238 aaPredicted RBP15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 SNRNP27Q8WVK2 155 aaKnown RBP15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 PLD4Q96BZ4 506 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 QRFPRQ96P65 431 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 CAPN10Q9HC96 672 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 CRTAC1Q9NQ79 661 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 MAGEL2Q9UJ55 1249 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 E7ESA3 106 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 UBXN8O00124 270 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 PRAMEF1O95521 474 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 HSMCR30P0CW71 290 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 IVDP26440 423 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 GNPDA1P46926 289 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 RFX3P48380 749 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 ABRQ12979 859 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 CAND1Q86VP6 1230 aaKnown RBP15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 DDX60Q8IY21 1712 aaKnown RBP15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 PRRG3Q9BZD7 231 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 SMOC2Q9H3U7 446 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 USP29Q9HBJ7 922 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 VPS51Q9UID3 782 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 POMPQ9Y244 141 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 MFHAS1Q9Y4C4 1052 aa15.26■□□□□ 0.03
PCDHA3-202ENST00000532566 TIPRLO75663 272 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 UGT2B4P06133 528 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 RPL17P18621 184 aaKnown RBP15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 SPAM1P38567 509 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 SLC10A7Q0GE19 358 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 PRSS55Q6UWB4 352 aaPredicted RBP15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 TBC1D21Q8IYX1 336 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 SLAIN1Q8ND83 568 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 TADA1Q96BN2 335 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 PANX1Q96RD7 426 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 FKBPLQ9UIM3 349 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 RFXANKO14593 260 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 ITM2AO43736 263 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 ESR1P03372 595 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 FBXW4P57775 412 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 TSNQ15631 228 aaKnown RBP15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 FBXO48Q5FWF7 155 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 FBXL22Q6P050 247 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 TIFABQ6ZNK6 161 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 TIFAQ96CG3 184 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 MRPS26Q9BYN8 205 aaKnown RBP15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 NUDT4Q9NZJ9 180 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 NEMP2A6NFY4 417 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 STK16O75716 305 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 VAV1P15498 845 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 SOX6P35712 828 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 ZNF33AQ06730 810 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 VPS26BQ4G0F5 336 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 ZC3HC1Q86WB0 502 aaKnown RBP15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 PROSER1Q86XN7 944 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 DCBLD1Q8N8Z6 715 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 OR2T12Q8NG77 320 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 CXorf40AQ8TE69 158 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 NELL1Q92832 810 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 POP5Q969H6 163 aaKnown RBP15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 BBS4Q96RK4 519 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 HERPUD2Q9BSE4 406 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 PCDH12Q9NPG4 1184 aa15.25■□□□□ 0.03
PCDHA3-202ENST00000532566 GRM6O15303 877 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 CRATP43155 626 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 SLC16A1P53985 500 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 DPYSQ14117 519 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 MSANTD2Q6P1R3 559 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms