RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 KLC2Q9H0B6 622 aa5.84□□□□□ -1.47
HMGB1P42-201ENST00000532126 C6orf106Q9H6K1 298 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P42-201ENST00000532126 ZDHHC6Q9H6R6 413 aa5.84□□□□□ -1.47
HMGB1P42-201ENST00000532126 SP110Q9HB58 689 aa5.84□□□□□ -1.47
HMGB1P42-201ENST00000532126 DMRT3Q9NQL9 472 aa5.84□□□□□ -1.47
HMGB1P42-201ENST00000532126 GPR27Q9NS67 375 aa5.84□□□□□ -1.47
HMGB1P42-201ENST00000532126 UBA2Q9UBT2 640 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P42-201ENST00000532126 EIF2B4Q9UI10 523 aaKnown RBP5.84□□□□□ -1.47
HMGB1P42-201ENST00000532126 IPO11Q9UI26 975 aaKnown RBP5.84□□□□□ -1.47
HMGB1P42-201ENST00000532126 GDF2Q9UK05 429 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P42-201ENST00000532126 ACAD8Q9UKU7 415 aa5.84□□□□□ -1.47
HMGB1P42-201ENST00000532126 SARDHQ9UL12 918 aa5.84□□□□□ -1.47
HMGB1P42-201ENST00000532126 RNF112Q9ULX5 631 aa5.84□□□□□ -1.47
HMGB1P42-201ENST00000532126 SLC6A14Q9UN76 642 aa5.84□□□□□ -1.47
HMGB1P42-201ENST00000532126 TFR2Q9UP52 801 aa5.84□□□□□ -1.47
HMGB1P42-201ENST00000532126 TRIM33Q9UPN9 1127 aa5.84□□□□□ -1.47
HMGB1P42-201ENST00000532126 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P42-201ENST00000532126 COQ6Q9Y2Z9 468 aa5.84□□□□□ -1.47
HMGB1P42-201ENST00000532126 SF3B6Q9Y3B4 125 aaKnown RBP5.84□□□□□ -1.47
HMGB1P42-201ENST00000532126 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.84□□□□□ -1.47
HMGB1P42-201ENST00000532126 MUC22E2RYF6 1773 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P42-201ENST00000532126 DMDP11532 3685 aa5.84□□□□□ -1.47
HMGB1P42-201ENST00000532126 ATG2BQ96BY7 2078 aa5.84□□□□□ -1.47
HMGB1P42-201ENST00000532126 TBC1D3DA0A087WVF3 549 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 TBC1D3IA0A087WXS9 549 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 TBC1D3EA0A087X179 549 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 TBC1D3KA0A087X1G2 549 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 A0A0A6YYK5 440 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 A0A1B0GTW7 788 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 LNP1A1A4G5 178 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 LRRD1A4D1F6 860 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 TBC1D3FA6NER0 549 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 TBC1D3LB9A6J9 549 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 J3KR12 359 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 BCAT2O15382 392 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 PLRG1O43660 514 aaKnown RBP5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 SPOPO43791 374 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 B3GALT2O43825 422 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 BUB1BO60566 1050 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 PALMO75781 387 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 UBXN7O94888 489 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 POP4O95707 220 aaKnown RBP5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 IGSF6O95976 241 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 CSTBP04080 98 aaKnown RBP5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 KRT1P04264 644 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 HNRNPCP07910 306 aaKnown RBP eCLIP5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 SERPINF2P08697 491 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 TBC1D3HP0C7X1 549 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 TNNT1P13805 278 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 ITIH2P19823 946 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 COMTP21964 271 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 KDELR1P24390 212 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 IL4RP24394 825 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 ITGB7P26010 798 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 CD27P26842 260 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 GKP32189 559 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 RAD52P43351 418 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 ARSEP51690 589 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 HADHBP55084 474 aaKnown RBP5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 ARL4CP56559 192 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 GSDMDP57764 484 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 IRX4P78413 519 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 RAD51Q06609 339 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 IL10RBQ08334 325 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 C19orf57Q0VDD7 668 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 DPYSL3Q14195 570 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 RFTN1Q14699 578 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 CYTH1Q15438 398 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 DUOXA1Q1HG43 343 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 RSPO4Q2I0M5 234 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 MYLK3Q32MK0 819 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 ANKRD20A8PQ5CZ79 823 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 ZNF805Q5CZA5 627 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 ATXN7L2Q5T6C5 722 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 LRRC38Q5VT99 294 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 AGBL4Q5VU57 503 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 TBC1D3GQ6DHY5 549 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 TBC1D3CQ6IPX1 549 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 SLC23A3Q6PIS1 610 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 RAD9BQ6WBX8 426 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 ARHGAP36Q6ZRI8 547 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 USP45Q70EL2 814 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 ERN2Q76MJ5 926 aaKnown RBP5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 KIAA1328Q86T90 577 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 TP53INP2Q8IXH6 220 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 RHOT1Q8IXI2 618 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 TBC1D3Q8IZP1 549 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 TXLNBQ8N3L3 684 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 ZCCHC9Q8N567 271 aaKnown RBP5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 ATPAF2Q8N5M1 289 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 ZNF610Q8N9Z0 462 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 PCDH19Q8TAB3 1148 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 FAM71BQ8TC56 605 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 NETO1Q8TDF5 533 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 NSMCE1Q8WV22 266 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 RAPGEF5Q92565 580 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 ARRDC3Q96B67 414 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 TMEM41AQ96HV5 264 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 CINPQ9BW66 212 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 OSBPL1AQ9BXW6 950 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms