RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 WHRNQ9P202 907 aa11.78□□□□□ -0.52
PPFIA1-220ENST00000532024 RIMKLBQ9ULI2 386 aa11.78□□□□□ -0.52
PPFIA1-220ENST00000532024 TCAF1Q9Y4C2 921 aa11.78□□□□□ -0.52
PPFIA1-220ENST00000532024 OR1A2Q9Y585 309 aa11.78□□□□□ -0.52
PPFIA1-220ENST00000532024 SLCO1B1Q9Y6L6 691 aa11.78□□□□□ -0.52
PPFIA1-220ENST00000532024 SLC30A1Q9Y6M5 507 aa11.78□□□□□ -0.52
PPFIA1-220ENST00000532024 CACNA1EQ15878 2313 aa11.78□□□□□ -0.52
PPFIA1-220ENST00000532024 VPS13AQ96RL7 3174 aa11.77□□□□□ -0.52
PPFIA1-220ENST00000532024 GVINP1Q7Z2Y8 2422 aa11.77□□□□□ -0.52
PPFIA1-220ENST00000532024 SPTY2D1-AS1A0A0U1RR47 76 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 TCRBV7S3A2A0A539 114 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 LNP1A1A4G5 178 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 SDR42E2A6NKP2 422 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 LDB2O43679 373 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 BUD23O43709 281 aaKnown RBP11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 PRAMEF1O95521 474 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 WNT1P04628 370 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 PAMP19021 973 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 ITGALP20701 1170 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 TRIM23P36406 574 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 GRIA1P42261 906 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 ARL4CP56559 192 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 PRAMEP78395 509 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 IRX4P78413 519 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 FOXK2Q01167 660 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 SF3A2Q15428 464 aaKnown RBP11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 HIF1AQ16665 826 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 KIF19Q2TAC6 998 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 CCDC38Q502W7 563 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 ANKRD22Q5VYY1 191 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 LAYNQ6UX15 382 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 FAM151BQ6UXP7 276 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 PLA2G15Q8NCC3 412 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 GPR26Q8NDV2 337 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 BTN2A2Q8WVV5 523 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 ULK4Q96C45 1275 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 EID2BQ96D98 161 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 TTC1Q99614 292 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 NAT9Q9BTE0 207 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 EDEM2Q9BV94 578 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 CARD6Q9BX69 1037 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 TEX101Q9BY14 249 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 DPH5Q9H2P9 285 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 SMOC1Q9H4F8 434 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 MRM3Q9HC36 420 aaKnown RBP11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 NLE1Q9NVX2 485 aaPredicted RBP11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 KLQ9UEF7 1012 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 SNX11Q9Y5W9 270 aa11.77□□□□□ -0.53
PPFIA1-220ENST00000532024 RALGAPA1Q6GYQ0 2036 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 MROH6A6NGR9 719 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 K7ESM1 405 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 TNFRSF10CO14798 259 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 SLC25A14O95258 325 aaPredicted RBP11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 IVDP26440 423 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 MGAT1P26572 445 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 PPARGP37231 505 aaPredicted RBP11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 RPL21P46778 160 aaKnown RBP11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 CCT8P50990 548 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 ITGA8P53708 1063 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 HNRNPKP61978 463 aaKnown RBP eCLIP11.76□□□□□ -0.534e-8■■■■■ 29
PPFIA1-220ENST00000532024 CDK3Q00526 305 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 MSLNQ13421 630 aaPredicted RBP11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 INAVAQ3KP66 663 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 GPR33Q49SQ1 333 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 LDLRAP1Q5SW96 308 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 TSTD2Q5T7W7 516 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 DUPD1Q68J44 220 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 TCEAL6Q6IPX3 200 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 HIBCHQ6NVY1 386 aaPredicted RBP11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 AFTPHQ6ULP2 937 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 RFLNAQ6ZTI6 216 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 ZNF534Q76KX8 674 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 CAND1Q86VP6 1230 aaKnown RBP11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 OR56A4Q8NGH8 313 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 OR13C4Q8NGS5 318 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 GABPB2Q8TAK5 448 aaPredicted RBP11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 GDAP1Q8TB36 358 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 TCEAL3Q969E4 200 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 GLYATL1Q969I3 302 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 FUBP1Q96AE4 644 aaKnown RBP11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 LRRC39Q96DD0 335 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 DNAJC1Q96KC8 554 aaKnown RBP11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 TTC25Q96NG3 672 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 VPS35Q96QK1 796 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 ELF4Q99607 663 aaPredicted RBP11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 FAM129AQ9BZQ8 928 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 SLC13A1Q9BZW2 595 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 GAREM1Q9H706 876 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 L2HGDHQ9H9P8 463 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 IL26Q9NPH9 171 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 TMEM9BQ9NQ34 198 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 GPR27Q9NS67 375 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 DNAJC28Q9NX36 388 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 SYBUQ9NX95 663 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 VPS18Q9P253 973 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 FKBPLQ9UIM3 349 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 SNX24Q9Y343 169 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 MAD1L1Q9Y6D9 718 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 SCN8AQ9UQD0 1980 aa11.76□□□□□ -0.53
PPFIA1-220ENST00000532024 FRYLO94915 3013 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms