RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 XPO4Q9C0E2 1151 aaKnown RBP16.74■□□□□ 0.27
CPSF1-207ENST00000531727 WDR70Q9NW82 654 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 RPL26L1Q9UNX3 145 aaKnown RBP16.74■□□□□ 0.27
CPSF1-207ENST00000531727 PLEKHM1Q9Y4G2 1056 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 PRAMEF33A0A0G2JMD5 474 aa16.73■□□□□ 0.27
CPSF1-207ENST00000531727 EFSO43281 561 aa16.73■□□□□ 0.27
CPSF1-207ENST00000531727 PRAMEF10O60809 474 aa16.73■□□□□ 0.27
CPSF1-207ENST00000531727 TPM3P06753 285 aa16.73■□□□□ 0.27
CPSF1-207ENST00000531727 PLA2G2AP14555 144 aa16.73■□□□□ 0.27
CPSF1-207ENST00000531727 CD1CP29017 333 aa16.73■□□□□ 0.27
CPSF1-207ENST00000531727 MAN1A1P33908 653 aa16.73■□□□□ 0.27
CPSF1-207ENST00000531727 MAPK10P53779 464 aa16.73■□□□□ 0.27
CPSF1-207ENST00000531727 SLC10A2Q12908 348 aaPredicted RBP16.73■□□□□ 0.27
CPSF1-207ENST00000531727 LY6DQ14210 128 aa16.73■□□□□ 0.27
CPSF1-207ENST00000531727 PYCR3Q53H96 274 aa16.73■□□□□ 0.27
CPSF1-207ENST00000531727 ZNF574Q6ZN55 896 aaPredicted RBP16.73■□□□□ 0.27
CPSF1-207ENST00000531727 USP53Q70EK8 1073 aa16.73■□□□□ 0.27
CPSF1-207ENST00000531727 ZNF605Q86T29 641 aa16.73■□□□□ 0.27
CPSF1-207ENST00000531727 CCNYQ8ND76 341 aa16.73■□□□□ 0.27
CPSF1-207ENST00000531727 LPCAT1Q8NF37 534 aa16.73■□□□□ 0.27
CPSF1-207ENST00000531727 EXD1Q8NHP7 514 aa16.73■□□□□ 0.27
CPSF1-207ENST00000531727 LRRN4Q8WUT4 740 aa16.73■□□□□ 0.27
CPSF1-207ENST00000531727 USP7Q93009 1102 aa16.73■□□□□ 0.27
CPSF1-207ENST00000531727 COX14Q96I36 57 aa16.73■□□□□ 0.27
CPSF1-207ENST00000531727 RIOK2Q9BVS4 552 aaKnown RBP16.73■□□□□ 0.27
CPSF1-207ENST00000531727 B3GNT4Q9C0J1 378 aa16.73■□□□□ 0.27
CPSF1-207ENST00000531727 PCDH9Q9HC56 1237 aa16.73■□□□□ 0.27
CPSF1-207ENST00000531727 DTLQ9NZJ0 730 aa16.73■□□□□ 0.27
CPSF1-207ENST00000531727 AKAP7Q9P0M2 348 aaPredicted RBP16.73■□□□□ 0.27
CPSF1-207ENST00000531727 C9orf172C9J069 976 aa16.72■□□□□ 0.27
CPSF1-207ENST00000531727 PPM1DO15297 605 aa16.72■□□□□ 0.27
CPSF1-207ENST00000531727 INPP4BO15327 924 aa16.72■□□□□ 0.27
CPSF1-207ENST00000531727 CLDN7O95471 211 aa16.72■□□□□ 0.27
CPSF1-207ENST00000531727 KDELR1P24390 212 aa16.72■□□□□ 0.27
CPSF1-207ENST00000531727 LRP8Q14114 963 aa16.72■□□□□ 0.27
CPSF1-207ENST00000531727 ASTE1Q2TB18 679 aaPredicted RBP16.72■□□□□ 0.27
CPSF1-207ENST00000531727 ZFYVE27Q5T4F4 411 aa16.72■□□□□ 0.27
CPSF1-207ENST00000531727 MARK2Q7KZI7 788 aaKnown RBP16.72■□□□□ 0.27
CPSF1-207ENST00000531727 GALNT13Q8IUC8 556 aa16.72■□□□□ 0.27
CPSF1-207ENST00000531727 CCDC13Q8IYE1 715 aa16.72■□□□□ 0.27
CPSF1-207ENST00000531727 RNF157Q96PX1 679 aa16.72■□□□□ 0.27
CPSF1-207ENST00000531727 SEMA4CQ9C0C4 833 aa16.72■□□□□ 0.27
CPSF1-207ENST00000531727 FOXJ2Q9P0K8 574 aa16.72■□□□□ 0.27
CPSF1-207ENST00000531727 SEPT10Q9P0V9 454 aa16.72■□□□□ 0.27
CPSF1-207ENST00000531727 IGHV1OR21-1A0A087WYE8 117 aa16.71■□□□□ 0.27
CPSF1-207ENST00000531727 IGHV5-10-1A0A0J9YXX1 117 aa16.71■□□□□ 0.27
CPSF1-207ENST00000531727 SSU72P8A0A1W2PR75 194 aa16.71■□□□□ 0.27
CPSF1-207ENST00000531727 HGSO14964 777 aaPredicted RBP16.71■□□□□ 0.27
CPSF1-207ENST00000531727 JCHAINP01591 159 aa16.71■□□□□ 0.27
CPSF1-207ENST00000531727 MMP2P08253 660 aa16.71■□□□□ 0.27
CPSF1-207ENST00000531727 TMEM253P0C7T8 217 aa16.71■□□□□ 0.27
CPSF1-207ENST00000531727 CD82P27701 267 aa16.71■□□□□ 0.27
CPSF1-207ENST00000531727 PPIDQ08752 370 aaKnown RBP16.71■□□□□ 0.27
CPSF1-207ENST00000531727 SQSTM1Q13501 440 aa16.71■□□□□ 0.27
CPSF1-207ENST00000531727 MESDQ14696 234 aa16.71■□□□□ 0.27
CPSF1-207ENST00000531727 ZFAND4Q86XD8 727 aa16.71■□□□□ 0.27
CPSF1-207ENST00000531727 RCBTB1Q8NDN9 531 aa16.71■□□□□ 0.27
CPSF1-207ENST00000531727 RAPGEF5Q92565 580 aa16.71■□□□□ 0.27
CPSF1-207ENST00000531727 CCDC74BQ96LY2 380 aa16.71■□□□□ 0.27
CPSF1-207ENST00000531727 ZNF830Q96NB3 372 aaPredicted RBP16.71■□□□□ 0.27
CPSF1-207ENST00000531727 WDR24Q96S15 920 aa16.71■□□□□ 0.27
CPSF1-207ENST00000531727 DNAJC7Q99615 494 aa16.71■□□□□ 0.27
CPSF1-207ENST00000531727 DEF6Q9H4E7 631 aa16.71■□□□□ 0.27
CPSF1-207ENST00000531727 VPS18Q9P253 973 aa16.71■□□□□ 0.27
CPSF1-207ENST00000531727 ZFC3H1O60293 1989 aaKnown RBP16.71■□□□□ 0.27
CPSF1-207ENST00000531727 C1orf232A0A0U1RR37 186 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 ZNF487B1APH4 448 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 KCNK1O00180 336 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 DNAJC6O75061 913 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 ASMTLO95671 621 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 CCL4P13236 92 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 CD86P42081 329 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 FASLGP48023 281 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 SPINT3P49223 89 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 LIMK2P53671 638 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 IFI35P80217 286 aaPredicted RBP16.7■□□□□ 0.26
CPSF1-207ENST00000531727 SRSF6Q13247 344 aaKnown RBP16.7■□□□□ 0.26
CPSF1-207ENST00000531727 TRA2AQ13595 282 aaKnown RBP eCLIP16.7■□□□□ 0.26
CPSF1-207ENST00000531727 TRIM14Q14142 442 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 QPCTQ16769 361 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 HENMT1Q5T8I9 393 aaKnown RBP16.7■□□□□ 0.26
CPSF1-207ENST00000531727 TMEM164Q5U3C3 297 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 NKAIN2Q5VXU1 208 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 DTX1Q86Y01 620 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 PLD5Q8N7P1 536 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 CNTD1Q8N815 330 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 OR4D9Q8NGE8 314 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 OR8K1Q8NGG5 319 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 SLC37A2Q8TED4 501 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 SGF29Q96ES7 293 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 MED8Q96G25 268 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 DPYSL5Q9BPU6 564 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 MLPHQ9BV36 600 aaPredicted RBP16.7■□□□□ 0.26
CPSF1-207ENST00000531727 FAM83DQ9H4H8 585 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 KCNK4Q9NYG8 393 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 ZNHIT2Q9UHR6 403 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 CNOT6Q9ULM6 557 aaKnown RBP16.7■□□□□ 0.26
CPSF1-207ENST00000531727 PCDHB11Q9Y5F2 797 aa16.7■□□□□ 0.26
CPSF1-207ENST00000531727 OAS3Q9Y6K5 1087 aaKnown RBP16.7■□□□□ 0.26
CPSF1-207ENST00000531727 CFAP46Q8IYW2 2715 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms