RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 GJC3Q8NFK1 279 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 OR14L1PQ8NHC6 308 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 KIF18AQ8NI77 898 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 GDAP1Q8TB36 358 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 PTPMT1Q8WUK0 201 aaPredicted RBP4.47□□□□□ -1.69
USP47-211ENST00000531513 SNAPC3Q92966 411 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 PTERQ96BW5 349 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 RNF183Q96D59 192 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 THOC3Q96J01 351 aaKnown RBP4.47□□□□□ -1.69
USP47-211ENST00000531513 SLITRK1Q96PX8 696 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 GAD1Q99259 594 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 CITED2Q99967 270 aaPredicted RBP4.47□□□□□ -1.69
USP47-211ENST00000531513 TRMOQ9BU70 441 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 R3HDM2Q9Y2K5 976 aaKnown RBP4.47□□□□□ -1.69
USP47-211ENST00000531513 ARHGEF40Q8TER5 1519 aa4.46□□□□□ -1.69
USP47-211ENST00000531513 SLC22A23A1A5C7 686 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 KLK8O60259 260 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 ZC3H11AO75152 810 aaKnown RBP eCLIP4.46□□□□□ -1.7
USP47-211ENST00000531513 JRKO75564 520 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 SLU7O95391 586 aaKnown RBP4.46□□□□□ -1.7
USP47-211ENST00000531513 C22orf31O95567 290 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 WNT1P04628 370 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 HIST1H2ABP04908 130 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 FYNP06241 537 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 ETFAP13804 333 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 MMP9P14780 707 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 TNFRSF1BP20333 461 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 HIST1H2ADP20671 130 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 ACADLP28330 430 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 HOXC8P31273 242 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 HOXC13P31276 330 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 TLX1P31314 330 aaPredicted RBP4.46□□□□□ -1.7
USP47-211ENST00000531513 KRT2P35908 639 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 SLC16A2P36021 539 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 CDKN2AP42771 156 aaKnown RBP4.46□□□□□ -1.7
USP47-211ENST00000531513 CXCR3P49682 368 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 CLCN5P51795 746 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 CSE1LP55060 971 aaKnown RBP4.46□□□□□ -1.7
USP47-211ENST00000531513 HSF1Q00613 529 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 PMPCAQ10713 525 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 MTX1Q13505 466 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 PLEKHO1Q53GL0 409 aaPredicted RBP4.46□□□□□ -1.7
USP47-211ENST00000531513 CCDC92Q53HC0 331 aaPredicted RBP4.46□□□□□ -1.7
USP47-211ENST00000531513 RARS2Q5T160 578 aaKnown RBP4.46□□□□□ -1.7
USP47-211ENST00000531513 LRIF1Q5T3J3 769 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 TRAT1Q6PIZ9 186 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 LRIG3Q6UXM1 1119 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 QSOX2Q6ZRP7 698 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 RBPMS2Q6ZRY4 209 aaKnown RBP4.46□□□□□ -1.7
USP47-211ENST00000531513 HIST3H2AQ7L7L0 130 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 SERPINA11Q86U17 422 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 TSPAN33Q86UF1 283 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 WDR63Q8IWG1 891 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 CCDC13Q8IYE1 715 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 ZDHHC23Q8IYP9 409 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 CEP57L1Q8IYX8 460 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 GUF1Q8N442 669 aaKnown RBP4.46□□□□□ -1.7
USP47-211ENST00000531513 CARNMT1Q8N4J0 409 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 BCAS4Q8TDM0 211 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 SECISBP2LQ93073 1101 aaKnown RBP4.46□□□□□ -1.7
USP47-211ENST00000531513 FAM162AQ96A26 154 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 MOAP1Q96BY2 351 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 FBXL8Q96CD0 374 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 SLC41A2Q96JW4 573 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 PPP1R13BQ96KQ4 1090 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 FAM110AQ9BQ89 295 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 TMEM47Q9BQJ4 181 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 THUMPD3Q9BV44 507 aaKnown RBP4.46□□□□□ -1.7
USP47-211ENST00000531513 CDT1Q9H211 546 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 VPS33BQ9H267 617 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 MOV10Q9HCE1 1003 aaKnown RBP4.46□□□□□ -1.7
USP47-211ENST00000531513 PAG1Q9NWQ8 432 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 PLEKHB1Q9UF11 243 aaPredicted RBP4.46□□□□□ -1.7
USP47-211ENST00000531513 NDRG3Q9UGV2 375 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.46□□□□□ -1.7
USP47-211ENST00000531513 A3GALT2U3KPV4 340 aa4.46□□□□□ -1.7
USP47-211ENST00000531513 A0A0U1RQF3 1178 aa4.45□□□□□ -1.7
USP47-211ENST00000531513 LNP1A1A4G5 178 aa4.45□□□□□ -1.7
USP47-211ENST00000531513 DPPA5A6NC42 116 aa4.45□□□□□ -1.7
USP47-211ENST00000531513 PRSS44E7EML9 344 aa4.45□□□□□ -1.7
USP47-211ENST00000531513 PSMA7O14818 248 aa4.45□□□□□ -1.7
USP47-211ENST00000531513 WDR46O15213 610 aaKnown RBP4.45□□□□□ -1.7
USP47-211ENST00000531513 OGG1O15527 345 aa4.45□□□□□ -1.7
USP47-211ENST00000531513 DIAPH2O60879 1101 aa4.45□□□□□ -1.7
USP47-211ENST00000531513 ATP2C2O75185 946 aa4.45□□□□□ -1.7
USP47-211ENST00000531513 RECQL5O94762 991 aaPredicted RBP4.45□□□□□ -1.7
USP47-211ENST00000531513 MMP2P08253 660 aa4.45□□□□□ -1.7
USP47-211ENST00000531513 FDPSP14324 419 aaKnown RBP4.45□□□□□ -1.7
USP47-211ENST00000531513 ANXA7P20073 488 aaKnown RBP4.45□□□□□ -1.7
USP47-211ENST00000531513 SLC12A2P55011 1212 aa4.45□□□□□ -1.7
USP47-211ENST00000531513 TAS2R40P59535 323 aa4.45□□□□□ -1.7
USP47-211ENST00000531513 SORDQ00796 357 aa4.45□□□□□ -1.7
USP47-211ENST00000531513 CXCL9Q07325 125 aa4.45□□□□□ -1.7
USP47-211ENST00000531513 ITGADQ13349 1161 aa4.45□□□□□ -1.7
USP47-211ENST00000531513 EARS2Q5JPH6 523 aaKnown RBP4.45□□□□□ -1.7
USP47-211ENST00000531513 PRAMEF19Q5SWL8 479 aa4.45□□□□□ -1.7
USP47-211ENST00000531513 NCAPH2Q6IBW4 605 aa4.45□□□□□ -1.7
USP47-211ENST00000531513 PLBD1Q6P4A8 553 aa4.45□□□□□ -1.7
USP47-211ENST00000531513 FBXO46Q6PJ61 603 aaPredicted RBP4.45□□□□□ -1.7
USP47-211ENST00000531513 SUSD1Q6UWL2 747 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms