RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 SLC37A2Q8TED4 501 aa18.32■□□□□ 0.52
SSSCA1-206ENST00000531405 TRIM11Q96F44 468 aa18.32■□□□□ 0.52
SSSCA1-206ENST00000531405 ISCUQ9H1K1 167 aa18.32■□□□□ 0.52
SSSCA1-206ENST00000531405 SLC39A1Q9NY26 324 aa18.32■□□□□ 0.52
SSSCA1-206ENST00000531405 RELNP78509 3460 aa18.32■□□□□ 0.52
SSSCA1-206ENST00000531405 EFCAB7A8K855 629 aa18.31■□□□□ 0.52
SSSCA1-206ENST00000531405 PPFIA2O75334 1257 aa18.31■□□□□ 0.52
SSSCA1-206ENST00000531405 MAP3K6O95382 1288 aa18.31■□□□□ 0.52
SSSCA1-206ENST00000531405 CD48P09326 243 aa18.31■□□□□ 0.52
SSSCA1-206ENST00000531405 SERPINB6P35237 376 aa18.31■□□□□ 0.52
SSSCA1-206ENST00000531405 SLC25A11Q02978 314 aaKnown RBP18.31■□□□□ 0.52
SSSCA1-206ENST00000531405 SQSTM1Q13501 440 aa18.31■□□□□ 0.52
SSSCA1-206ENST00000531405 PEX6Q13608 980 aa18.31■□□□□ 0.52
SSSCA1-206ENST00000531405 SNAP47Q5SQN1 464 aa18.31■□□□□ 0.52
SSSCA1-206ENST00000531405 ANKS6Q68DC2 871 aa18.31■□□□□ 0.52
SSSCA1-206ENST00000531405 GALNT13Q8IUC8 556 aa18.31■□□□□ 0.52
SSSCA1-206ENST00000531405 TEX26Q8N6G2 289 aa18.31■□□□□ 0.52
SSSCA1-206ENST00000531405 CCDC112Q8NEF3 446 aa18.31■□□□□ 0.52
SSSCA1-206ENST00000531405 SLC25A18Q9H1K4 315 aa18.31■□□□□ 0.52
SSSCA1-206ENST00000531405 GEMIN8Q9NWZ8 242 aaKnown RBP18.31■□□□□ 0.52
SSSCA1-206ENST00000531405 PRKAB1Q9Y478 270 aa18.31■□□□□ 0.52
SSSCA1-206ENST00000531405 A0A0J9YYE9 177 aa18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 A8MU76 341 aa18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 MFSD11O43934 449 aa18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 ASMTLO95671 621 aa18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 TRBC1P01850 177 aa18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 ATP1A1P05023 1023 aaKnown RBP18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 IL4RP24394 825 aa18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 EPHB1P54762 984 aa18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 DSC2Q02487 901 aa18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 KRT81Q14533 505 aa18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 CCDC183Q5T5S1 534 aa18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 TMEM71Q6P5X7 295 aa18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 BORAQ6PGQ7 559 aa18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 NRSN1Q8IZ57 195 aa18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 CACNA2D3Q8IZS8 1091 aa18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 SFRP1Q8N474 314 aa18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 TEKT4Q8WW24 435 aa18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 AHCYL2Q96HN2 611 aaKnown RBP18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 COX14Q96I36 57 aa18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 NAP1L5Q96NT1 182 aaPredicted RBP18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 GBP4Q96PP9 640 aa18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 SLC38A3Q99624 504 aa18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 RIOK2Q9BVS4 552 aaKnown RBP18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 DDA1Q9BW61 102 aa18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 CHKBQ9Y259 395 aa18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 OAS3Q9Y6K5 1087 aaKnown RBP18.3■□□□□ 0.52
SSSCA1-206ENST00000531405 UTP20O75691 2785 aaKnown RBP18.29■□□□□ 0.52
SSSCA1-206ENST00000531405 RAD1O60671 282 aa18.29■□□□□ 0.52
SSSCA1-206ENST00000531405 FASLGP48023 281 aa18.29■□□□□ 0.52
SSSCA1-206ENST00000531405 STC1P52823 247 aa18.29■□□□□ 0.52
SSSCA1-206ENST00000531405 GPLD1P80108 840 aa18.29■□□□□ 0.52
SSSCA1-206ENST00000531405 PIGHQ14442 188 aaPredicted RBP18.29■□□□□ 0.52
SSSCA1-206ENST00000531405 ZNF765Q7L2R6 523 aa18.29■□□□□ 0.52
SSSCA1-206ENST00000531405 PTRH1Q86Y79 214 aaKnown RBP18.29■□□□□ 0.52
SSSCA1-206ENST00000531405 NDUFAF2Q8N183 169 aa18.29■□□□□ 0.52
SSSCA1-206ENST00000531405 BMPERQ8N8U9 685 aa18.29■□□□□ 0.52
SSSCA1-206ENST00000531405 LRRN4Q8WUT4 740 aa18.29■□□□□ 0.52
SSSCA1-206ENST00000531405 CTRCQ99895 268 aa18.29■□□□□ 0.52
SSSCA1-206ENST00000531405 DPYSL5Q9BPU6 564 aa18.29■□□□□ 0.52
SSSCA1-206ENST00000531405 POLR1EQ9GZS1 481 aaKnown RBP18.29■□□□□ 0.52
SSSCA1-206ENST00000531405 THAP2Q9H0W7 228 aa18.29■□□□□ 0.52
SSSCA1-206ENST00000531405 ZNHIT2Q9UHR6 403 aa18.29■□□□□ 0.52
SSSCA1-206ENST00000531405 ANAPC7Q9UJX3 599 aa18.29■□□□□ 0.52
SSSCA1-206ENST00000531405 TTLL3Q9Y4R7 772 aa18.29■□□□□ 0.52
SSSCA1-206ENST00000531405 SPENQ96T58 3664 aaKnown RBP18.28■□□□□ 0.52
SSSCA1-206ENST00000531405 B4E171 279 aa18.28■□□□□ 0.52
SSSCA1-206ENST00000531405 DUX1O43812 170 aa18.28■□□□□ 0.52
SSSCA1-206ENST00000531405 CLDN7O95471 211 aa18.28■□□□□ 0.52
SSSCA1-206ENST00000531405 ZNF30P17039 623 aa18.28■□□□□ 0.52
SSSCA1-206ENST00000531405 GARSP41250 739 aaKnown RBP18.28■□□□□ 0.52
SSSCA1-206ENST00000531405 TSPAN7P41732 249 aa18.28■□□□□ 0.52
SSSCA1-206ENST00000531405 SSR1P43307 286 aaKnown RBP18.28■□□□□ 0.52
SSSCA1-206ENST00000531405 POLE2P56282 527 aa18.28■□□□□ 0.52
SSSCA1-206ENST00000531405 NFATC2Q13469 925 aa18.28■□□□□ 0.52
SSSCA1-206ENST00000531405 FILIP1LQ4L180 1135 aa18.28■□□□□ 0.52
SSSCA1-206ENST00000531405 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.28■□□□□ 0.52
SSSCA1-206ENST00000531405 DCAF12Q5T6F0 453 aa18.28■□□□□ 0.52
SSSCA1-206ENST00000531405 CHST15Q7LFX5 561 aaPredicted RBP18.28■□□□□ 0.52
SSSCA1-206ENST00000531405 NIPA2Q8N8Q9 360 aa18.28■□□□□ 0.52
SSSCA1-206ENST00000531405 OR10G6Q8NH81 332 aa18.28■□□□□ 0.52
SSSCA1-206ENST00000531405 EXD1Q8NHP7 514 aa18.28■□□□□ 0.52
SSSCA1-206ENST00000531405 TDRD1Q9BXT4 1180 aaKnown RBP18.28■□□□□ 0.52
SSSCA1-206ENST00000531405 ASPSCR1Q9BZE9 553 aa18.28■□□□□ 0.52
SSSCA1-206ENST00000531405 NAT10Q9H0A0 1025 aaKnown RBP18.28■□□□□ 0.52
SSSCA1-206ENST00000531405 TBC1D29Q9UFV1 150 aa18.28■□□□□ 0.52
SSSCA1-206ENST00000531405 PILRAQ9UKJ1 303 aa18.28■□□□□ 0.52
SSSCA1-206ENST00000531405 KCNK6Q9Y257 313 aa18.28■□□□□ 0.52
SSSCA1-206ENST00000531405 LRRK2Q5S007 2527 aa18.28■□□□□ 0.52
SSSCA1-206ENST00000531405 A0A1B0GTH6 734 aa18.27■□□□□ 0.52
SSSCA1-206ENST00000531405 DNAJC6O75061 913 aa18.27■□□□□ 0.52
SSSCA1-206ENST00000531405 PRLP01236 227 aa18.27■□□□□ 0.52
SSSCA1-206ENST00000531405 GJC1P36383 396 aa18.27■□□□□ 0.52
SSSCA1-206ENST00000531405 MAPK9P45984 424 aa18.27■□□□□ 0.52
SSSCA1-206ENST00000531405 HHEXQ03014 270 aa18.27■□□□□ 0.52
SSSCA1-206ENST00000531405 TLE1Q04724 770 aa18.27■□□□□ 0.52
SSSCA1-206ENST00000531405 GALNT2Q10471 571 aa18.27■□□□□ 0.52
SSSCA1-206ENST00000531405 KCNAB2Q13303 367 aa18.27■□□□□ 0.52
SSSCA1-206ENST00000531405 LRP8Q14114 963 aa18.27■□□□□ 0.52
SSSCA1-206ENST00000531405 ATP13A4Q4VNC1 1196 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms