RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 NOS2P35228 1153 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 HNMTP50135 292 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 E2F2Q14209 437 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 ECM1Q16610 540 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 POM121L1PQ3SYA9 428 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 RAP1GAP2Q684P5 730 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 HGSNATQ68CP4 663 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 RETSATQ6NUM9 610 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 OR5B17Q8NGF7 314 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 DNAJB3Q8WWF6 145 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 CLIP3Q96DZ5 547 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 CENPNQ96H22 339 aaPredicted RBP7.61□□□□□ -1.19
CTNND1-223ENST00000529986 SERPINB11Q96P15 392 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 DDX4Q9NQI0 724 aaKnown RBP7.61□□□□□ -1.19
CTNND1-223ENST00000529986 POLLQ9UGP5 575 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 PPM1HQ9ULR3 514 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 PPIEQ9UNP9 301 aaKnown RBP7.61□□□□□ -1.19
CTNND1-223ENST00000529986 ZNF232Q9UNY5 417 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 ERAL1O75616 437 aaKnown RBP7.61□□□□□ -1.19
CTNND1-223ENST00000529986 CPT1AP50416 773 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 ARHGAP15Q53QZ3 475 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 TNFAIP8L3Q5GJ75 292 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 FAM182AQ5T1J6 154 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 SYCE2Q6PIF2 218 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 PHF13Q86YI8 300 aaPredicted RBP7.61□□□□□ -1.19
CTNND1-223ENST00000529986 PHC2Q8IXK0 858 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 GMCL1P1Q8NEA9 526 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 AGBL3Q8NEM8 1001 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 CPT1BQ92523 772 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 NFKBIZQ9BYH8 718 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 VWA7Q9Y334 891 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 VIRMAQ69YN4 1812 aaKnown RBP7.61□□□□□ -1.19
CTNND1-223ENST00000529986 GPR182O15218 404 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 SLC28A2O43868 658 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 OTCP00480 354 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 CCNYL3P0C7X3 344 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 RPS12P25398 132 aaKnown RBP7.61□□□□□ -1.19
CTNND1-223ENST00000529986 VARSP26640 1264 aaKnown RBP7.61□□□□□ -1.19
CTNND1-223ENST00000529986 PFKPQ01813 784 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 ENPEPQ07075 957 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 PCDH1Q08174 1060 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 ABRQ12979 859 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 SNAPC2Q13487 334 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 CYP2A13Q16696 494 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.61□□□□□ -1.19
CTNND1-223ENST00000529986 LDB1Q86U70 411 aaPredicted RBP7.61□□□□□ -1.19
CTNND1-223ENST00000529986 SEMA3CQ99985 751 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 GPN1Q9HCN4 374 aaPredicted RBP7.61□□□□□ -1.19
CTNND1-223ENST00000529986 AMBNQ9NP70 447 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 NUP50Q9UKX7 468 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 A0A0G2JPF8 293 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 BBIP1A8MTZ0 92 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 HNRNPCL3B7ZW38 293 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 PDLIM1O00151 329 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 CDC40O60508 579 aaKnown RBP eCLIP7.61□□□□□ -1.19
CTNND1-223ENST00000529986 TGDSO95455 350 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 TFPTP0C1Z6 253 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 HNRNPCL4P0DMR1 293 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 MAN2A2P49641 1150 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 DNASE1L3Q13609 305 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 SLC39A12Q504Y0 691 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 PDCD4Q53EL6 469 aaKnown RBP7.61□□□□□ -1.19
CTNND1-223ENST00000529986 ADGRD1Q6QNK2 874 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 GHDCQ8N2G8 530 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 TNFAIP8L1Q8WVP5 186 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 AZIN2Q96A70 460 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 P2RY11Q96G91 374 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 ZDHHC15Q96MV8 337 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 FAM129BQ96TA1 746 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 SLC7A8Q9UHI5 535 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 TMX2Q9Y320 296 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 PCDHGA4Q9Y5G9 962 aa7.61□□□□□ -1.19
CTNND1-223ENST00000529986 FABP12A6NFH5 140 aa7.6□□□□□ -1.19
CTNND1-223ENST00000529986 A8MV72 311 aaPredicted RBP7.6□□□□□ -1.19
CTNND1-223ENST00000529986 I3L521 148 aa7.6□□□□□ -1.19
CTNND1-223ENST00000529986 TRAFD1O14545 582 aaPredicted RBP7.6□□□□□ -1.19
CTNND1-223ENST00000529986 HOXB8P17481 243 aaPredicted RBP7.6□□□□□ -1.19
CTNND1-223ENST00000529986 CTPS1P17812 591 aa7.6□□□□□ -1.19
CTNND1-223ENST00000529986 SHMT1P34896 483 aa7.6□□□□□ -1.19
CTNND1-223ENST00000529986 SMARCB1Q12824 385 aa7.6□□□□□ -1.19
CTNND1-223ENST00000529986 DLG1Q12959 904 aa7.6□□□□□ -1.19
CTNND1-223ENST00000529986 TMEM132BQ14DG7 1078 aa7.6□□□□□ -1.19
CTNND1-223ENST00000529986 SNAPC1Q16533 368 aa7.6□□□□□ -1.19
CTNND1-223ENST00000529986 RUNDC3AQ59EK9 446 aa7.6□□□□□ -1.19
CTNND1-223ENST00000529986 FAM171BQ6P995 826 aa7.6□□□□□ -1.19
CTNND1-223ENST00000529986 XKR5Q6UX68 686 aa7.6□□□□□ -1.19
CTNND1-223ENST00000529986 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.6□□□□□ -1.19
CTNND1-223ENST00000529986 RASAL3Q86YV0 1011 aa7.6□□□□□ -1.19
CTNND1-223ENST00000529986 FAM98AQ8NCA5 519 aaKnown RBP7.6□□□□□ -1.19
CTNND1-223ENST00000529986 TWIST2Q8WVJ9 160 aa7.6□□□□□ -1.19
CTNND1-223ENST00000529986 PMM1Q92871 262 aa7.6□□□□□ -1.19
CTNND1-223ENST00000529986 ITFG2Q969R8 447 aa7.6□□□□□ -1.19
CTNND1-223ENST00000529986 GTPBP3Q969Y2 492 aaKnown RBP7.6□□□□□ -1.19
CTNND1-223ENST00000529986 TMEM169Q96HH4 297 aa7.6□□□□□ -1.19
CTNND1-223ENST00000529986 TSPAN18Q96SJ8 248 aa7.6□□□□□ -1.19
CTNND1-223ENST00000529986 TM6SF2Q9BZW4 377 aa7.6□□□□□ -1.19
CTNND1-223ENST00000529986 COMMD3Q9UBI1 195 aa7.6□□□□□ -1.19
CTNND1-223ENST00000529986 SAMD4AQ9UPU9 718 aaKnown RBP7.6□□□□□ -1.19
CTNND1-223ENST00000529986 CLUHO75153 1309 aa7.6□□□□□ -1.19
CTNND1-223ENST00000529986 A0A0X1KG70 313 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms