RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 DRG1Q9Y295 367 aaKnown RBP12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 PRSS38A1L453 326 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 USP27XA6NNY8 438 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 FADS2P1A8MWK0 482 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 YY2O15391 372 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 PSMD3O43242 534 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 TRIM16O95361 564 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 SLC4A1P02730 911 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 ATP1A1P05023 1023 aaKnown RBP12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 CELA2BP08218 269 aaPredicted RBP12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 BPIP17213 487 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 MSNP26038 577 aaKnown RBP12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 MSLNQ13421 630 aaPredicted RBP12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 OLIG2Q13516 323 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 SPARCL1Q14515 664 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 ELOCQ15369 112 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 DEFB133Q30KQ1 61 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 DENND5AQ6IQ26 1287 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 LVRNQ6Q4G3 990 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 RASGEF1CQ8N431 466 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 PNPLA1Q8N8W4 532 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 BLOC1S5Q8TDH9 187 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 ADAMTS14Q8WXS8 1223 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 LRRC45Q96CN5 670 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 SCARF2Q96GP6 870 aaPredicted RBP12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 APOLD1Q96LR9 279 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 TBL1YQ9BQ87 522 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 APOL2Q9BQE5 337 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 HOMER3Q9NSC5 361 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 IL17CQ9P0M4 197 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 TTC7AQ9ULT0 858 aaPredicted RBP12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 WASF3Q9UPY6 502 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 SLC17A4Q9Y2C5 497 aa12.6□□□□□ -0.39
CCDC90B-216ENST00000529856 INPP4BO15327 924 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 USP12O75317 370 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 IFNB1P01574 187 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 IVLP07476 585 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 ANXA6P08133 673 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 CKMT1AP12532 417 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 ACP1P24666 158 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 ACTN2P35609 894 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 POLD2P49005 469 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 ACADVLP49748 655 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 FOXC1Q12948 553 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 DNAJC3Q13217 504 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 ALS2CLQ60I27 953 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 PDPK2PQ6A1A2 396 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 ZCCHC8Q6NZY4 707 aaKnown RBP12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 GLT6D1Q7Z4J2 308 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 RAB44Q7Z6P3 723 aaPredicted RBP12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 TRIM74Q86UV6 250 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 TRAM1L1Q8N609 369 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 PDCD7Q8N8D1 485 aaKnown RBP12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 DTX3LQ8TDB6 740 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 PTCD2Q8WV60 388 aaKnown RBP12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 MS4A14Q96JA4 679 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 PLEKHG4BQ96PX9 1271 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 ZSCAN5AQ9BUG6 496 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 SPATA16Q9BXB7 569 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 TMEM168Q9H0V1 697 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 CARS2Q9HA77 564 aaKnown RBP12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 BPIFA1Q9NP55 256 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 FEZ2Q9UHY8 353 aaPredicted RBP12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 MOSPD1Q9UJG1 213 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 SUFUQ9UMX1 484 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 TMEM98Q9Y2Y6 226 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 PCDHGA1Q9Y5H4 931 aa12.59□□□□□ -0.39
CCDC90B-216ENST00000529856 SCN8AQ9UQD0 1980 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 LY6G6EA0A0G2JKS1 128 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 PPFIA2O75334 1257 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 AP2A1O95782 977 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 TOP3BO95985 862 aaKnown RBP12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 ETS1P14921 441 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 FDFT1P37268 417 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 GNPDA1P46926 289 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 SHC2P98077 582 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 DAB2P98082 770 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 TAF1AQ15573 450 aaPredicted RBP12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 ZDHHC20Q5W0Z9 365 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 DOK6Q6PKX4 331 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 PRUNE1Q86TP1 453 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 GKN2Q86XP6 184 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 CHCHD4Q8N4Q1 142 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 TAB3Q8N5C8 712 aaPredicted RBP12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 PRELID2Q8N945 189 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 GLIS1Q8NBF1 620 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 BRSK1Q8TDC3 778 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 GPBAR1Q8TDU6 330 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 SCG3Q8WXD2 468 aaKnown RBP12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 OSBPL9Q96SU4 736 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 BOCQ9BWV1 1114 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 LRRC40Q9H9A6 602 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 ETNK1Q9HBU6 452 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 IL26Q9NPH9 171 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 TRNAU1APQ9NX07 287 aaKnown RBP12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 NCKIPSDQ9NZQ3 722 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 VPS18Q9P253 973 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 PAK5Q9P286 719 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 SNX12Q9UMY4 172 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms