RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 SUPT20HL2P0C7V6 817 aa4.99□□□□□ -1.61
CSDE1-212ENST00000529046 SNHG28P0DPA3 235 aa4.99□□□□□ -1.61
CSDE1-212ENST00000529046 MX1P20591 662 aa4.99□□□□□ -1.61
CSDE1-212ENST00000529046 SCP2P22307 547 aa4.99□□□□□ -1.61
CSDE1-212ENST00000529046 SLC16A2P36021 539 aa4.99□□□□□ -1.61
CSDE1-212ENST00000529046 GPD2P43304 727 aa4.99□□□□□ -1.61
CSDE1-212ENST00000529046 GOLGA8FQ08AF8 430 aa4.99□□□□□ -1.61
CSDE1-212ENST00000529046 AP5B1Q2VPB7 878 aa4.99□□□□□ -1.61
CSDE1-212ENST00000529046 PSRC1Q6PGN9 363 aaPredicted RBP4.99□□□□□ -1.61
CSDE1-212ENST00000529046 TRIM74Q86UV6 250 aa4.99□□□□□ -1.61
CSDE1-212ENST00000529046 TRIM73Q86UV7 250 aa4.99□□□□□ -1.61
CSDE1-212ENST00000529046 ZDHHC23Q8IYP9 409 aa4.99□□□□□ -1.61
CSDE1-212ENST00000529046 SLC25A41Q8N5S1 370 aa4.99□□□□□ -1.61
CSDE1-212ENST00000529046 ARFGAP1Q8N6T3 406 aa4.99□□□□□ -1.61
CSDE1-212ENST00000529046 RFWD2Q8NHY2 731 aa4.99□□□□□ -1.61
CSDE1-212ENST00000529046 FAR1Q8WVX9 515 aa4.99□□□□□ -1.61
CSDE1-212ENST00000529046 ELP4Q96EB1 424 aa4.99□□□□□ -1.61
CSDE1-212ENST00000529046 VCPIP1Q96JH7 1222 aa4.99□□□□□ -1.61
CSDE1-212ENST00000529046 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.99□□□□□ -1.61
CSDE1-212ENST00000529046 RANBP17Q9H2T7 1088 aaKnown RBP4.99□□□□□ -1.61
CSDE1-212ENST00000529046 HIPK3Q9H422 1215 aa4.99□□□□□ -1.61
CSDE1-212ENST00000529046 UBN1Q9NPG3 1134 aa4.99□□□□□ -1.61
CSDE1-212ENST00000529046 PNRC2Q9NPJ4 139 aaKnown RBP4.99□□□□□ -1.61
CSDE1-212ENST00000529046 ADD3Q9UEY8 706 aaKnown RBP4.99□□□□□ -1.61
CSDE1-212ENST00000529046 TBX20Q9UMR3 447 aa4.99□□□□□ -1.61
CSDE1-212ENST00000529046 MYH7P12883 1935 aa4.99□□□□□ -1.61
CSDE1-212ENST00000529046 MYH8P13535 1937 aa4.99□□□□□ -1.61
CSDE1-212ENST00000529046 BAZ2AQ9UIF9 1905 aaKnown RBP4.99□□□□□ -1.61
CSDE1-212ENST00000529046 UNC80Q8N2C7 3258 aa4.99□□□□□ -1.61
CSDE1-212ENST00000529046 WDR19Q8NEZ3 1342 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 COL11A1P12107 1806 aaPredicted RBP4.98□□□□□ -1.61
CSDE1-212ENST00000529046 SMCHD1A6NHR9 2005 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 A0A0A0MQY5 61 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 OR6C68A6NDL8 312 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 GAGE12JA6NER3 117 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 GAGE10A6NGK3 116 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 A6NNC1 897 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 B4DLN1 442 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 INSIG1O15503 277 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 PRDM1O75626 825 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 AGR2O95994 175 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 WEE2P0C1S8 567 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 TOP1P11387 765 aaKnown RBP4.98□□□□□ -1.61
CSDE1-212ENST00000529046 UNGP13051 313 aaPredicted RBP4.98□□□□□ -1.61
CSDE1-212ENST00000529046 MCCP23508 829 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 TUBP50607 506 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 CYP2J2P51589 502 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 MRPL12P52815 198 aaKnown RBP4.98□□□□□ -1.61
CSDE1-212ENST00000529046 FOXG1P55316 489 aaPredicted RBP4.98□□□□□ -1.61
CSDE1-212ENST00000529046 CNTN2Q02246 1040 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 PMPCAQ10713 525 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 ITGA7Q13683 1181 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 SLC18A3Q16572 532 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 DUSP28Q4G0W2 176 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 MCMDC2Q4G0Z9 681 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 GPATCH4Q5T3I0 446 aaKnown RBP4.98□□□□□ -1.61
CSDE1-212ENST00000529046 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.98□□□□□ -1.61
CSDE1-212ENST00000529046 TLK2Q86UE8 772 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 IGFN1Q86VF2 1251 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 NAXEQ8NCW5 288 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 ZCCHC10Q8TBK6 192 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 NSMCE1Q8WV22 266 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 TMEM170AQ8WVE7 144 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 SEC62Q99442 399 aaKnown RBP4.98□□□□□ -1.61
CSDE1-212ENST00000529046 FSD1Q9BTV5 496 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 MTIF3Q9H2K0 278 aaKnown RBP4.98□□□□□ -1.61
CSDE1-212ENST00000529046 EPHX3Q9H6B9 360 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 MAP6D1Q9H9H5 199 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 POT1Q9NUX5 634 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 BEX4Q9NWD9 120 aaPredicted RBP4.98□□□□□ -1.61
CSDE1-212ENST00000529046 HCN3Q9P1Z3 774 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 ZHX1Q9UKY1 873 aaPredicted RBP4.98□□□□□ -1.61
CSDE1-212ENST00000529046 SUFUQ9UMX1 484 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 STX8Q9UNK0 236 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 HS3ST3B1Q9Y662 390 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 PLXNA1Q9UIW2 1896 aa4.98□□□□□ -1.61
CSDE1-212ENST00000529046 ASTN1O14525 1302 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 GRIN2DO15399 1336 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 MDM4O15151 490 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 HBP1O60381 514 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 GUCY1B2O75343 617 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 SERPINC1P01008 464 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 HSPD1P10809 573 aaKnown RBP4.97□□□□□ -1.61
CSDE1-212ENST00000529046 FOSL2P15408 326 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 CSF2RAP15509 400 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 RFC2P35250 354 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 LIFRP42702 1097 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 ME1P48163 572 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 RASSF2P50749 326 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 NR1H2P55055 460 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 INPP5JQ15735 1006 aaPredicted RBP4.97□□□□□ -1.61
CSDE1-212ENST00000529046 SYTL3Q4VX76 610 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 ENTPD8Q5MY95 495 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 C6orf10Q5SRN2 563 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 WDR5BQ86VZ2 330 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 GPSM1Q86YR5 675 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 MMP21Q8N119 569 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 OR4N2Q8NGD1 307 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 PHOSPHO2Q8TCD6 241 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 UBE2Q2Q8WVN8 375 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms