RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 PXNP49023 591 aaPredicted RBP7.89□□□□□ -1.15
SSBP3-211ENST00000528787 KIAA1024LP59773 190 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 DHX9Q08211 1270 aaKnown RBP7.89□□□□□ -1.15
SSBP3-211ENST00000528787 NFATC2Q13469 925 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 BRD3Q15059 726 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 CDKN3Q16667 212 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 KLHL38Q2WGJ6 581 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 INAVAQ3KP66 663 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 ANKRD20A4Q4UJ75 823 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 CERCAMQ5T4B2 595 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 HENMT1Q5T8I9 393 aaKnown RBP7.89□□□□□ -1.15
SSBP3-211ENST00000528787 UGT3A1Q6NUS8 523 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 PNCKQ6P2M8 343 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 TSSK4Q6SA08 328 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 Q6ZVL8 140 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 HSD11B1LQ7Z5J1 315 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 CCDC91Q7Z6B0 441 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 GALNT7Q86SF2 657 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 PRUNE1Q86TP1 453 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 SLC26A11Q86WA9 606 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 CCDC25Q86WR0 208 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 ZSWIM9Q86XI8 627 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 MAML2Q8IZL2 1156 aaPredicted RBP7.89□□□□□ -1.15
SSBP3-211ENST00000528787 RBFAQ8N0V3 343 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 TTC30BQ8N4P2 665 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 OTUD6BQ8N6M0 293 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 BEND7Q8N7W2 519 aaPredicted RBP7.89□□□□□ -1.15
SSBP3-211ENST00000528787 AVL9Q8NBF6 648 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 GPR150Q8NGU9 434 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 GDAP1Q8TB36 358 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 RLN3Q8WXF3 142 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 ATOH1Q92858 354 aaPredicted RBP7.89□□□□□ -1.15
SSBP3-211ENST00000528787 ZNF669Q96BR6 464 aaPredicted RBP7.89□□□□□ -1.15
SSBP3-211ENST00000528787 CENPTQ96BT3 561 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 CDKN2AIPNLQ96HQ2 116 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 HIC2Q96JB3 615 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 SIGLEC10Q96LC7 697 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 TBATAQ96M53 351 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 PANX3Q96QZ0 392 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 CYTH2Q99418 400 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 COPS8Q99627 209 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 NUSAP1Q9BXS6 441 aaKnown RBP7.89□□□□□ -1.15
SSBP3-211ENST00000528787 SLC6A17Q9H1V8 727 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 C6orf106Q9H6K1 298 aaPredicted RBP7.89□□□□□ -1.15
SSBP3-211ENST00000528787 ASB8Q9H765 288 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 ERVMER34-1Q9H9K5 563 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 TRIM39Q9HCM9 518 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 C11orf16Q9NQ32 467 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 PPANQ9NQ55 473 aaKnown RBP7.89□□□□□ -1.15
SSBP3-211ENST00000528787 CATSPERZQ9NTU4 200 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 ZDHHC18Q9NUE0 388 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 POLR3BQ9NW08 1133 aaPredicted RBP7.89□□□□□ -1.15
SSBP3-211ENST00000528787 SYBUQ9NX95 663 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 GRHL1Q9NZI5 618 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 ZFATQ9P243 1243 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 VPS18Q9P253 973 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 SERGEFQ9UGK8 458 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 DMGDHQ9UI17 866 aaKnown RBP7.89□□□□□ -1.15
SSBP3-211ENST00000528787 GPR34Q9UPC5 381 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 PCDHB1Q9Y5F3 818 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 ARL5AQ9Y689 179 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 DNMT3AQ9Y6K1 912 aaPredicted RBP7.89□□□□□ -1.15
SSBP3-211ENST00000528787 SCN8AQ9UQD0 1980 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 A0A087WUV0 522 aaPredicted RBP7.88□□□□□ -1.15
SSBP3-211ENST00000528787 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 ESYT3A0FGR9 886 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 CCDC151A5D8V7 595 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 A8MX80 341 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 BHMG1C9JSJ3 638 aaPredicted RBP7.88□□□□□ -1.15
SSBP3-211ENST00000528787 SLC31A1O15431 190 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 CD3EAPO15446 510 aaKnown RBP7.88□□□□□ -1.15
SSBP3-211ENST00000528787 ZW10O43264 779 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 NDUFS3O75489 264 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 CER1O95813 267 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 FTH1P02794 183 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 IGHV4-34P06331 123 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 RETP07949 1114 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 ABHD2P08910 425 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 C1SP09871 688 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 SLC2A4P14672 509 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 BPIP17213 487 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 MSH3P20585 1137 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 CNTFP26441 200 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 MAT2AP31153 395 aaKnown RBP7.88□□□□□ -1.15
SSBP3-211ENST00000528787 AKT1P31749 480 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 ETV3P41162 512 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 ELK3P41970 407 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 PTGER3P43115 390 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 POLD2P49005 469 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 METAP1P53582 386 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 ATXN3P54252 364 aaPredicted RBP7.88□□□□□ -1.15
SSBP3-211ENST00000528787 TERF1P54274 439 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 ADARP55265 1226 aaKnown RBP7.88□□□□□ -1.15
SSBP3-211ENST00000528787 MGAT5Q09328 741 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 MSLNQ13421 630 aaPredicted RBP7.88□□□□□ -1.15
SSBP3-211ENST00000528787 LRP8Q14114 963 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 CRYMQ14894 314 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 NFATC4Q14934 902 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 ZRANB3Q5FWF4 1079 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 PEAR1Q5VY43 1037 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms