RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 TMCO4Q5TGY1 634 aa12.21□□□□□ -0.45
SRPRA-202ENST00000527817 DOK6Q6PKX4 331 aa12.21□□□□□ -0.45
SRPRA-202ENST00000527817 PLXDC1Q8IUK5 500 aa12.21□□□□□ -0.45
SRPRA-202ENST00000527817 ZNF599Q96NL3 588 aa12.21□□□□□ -0.45
SRPRA-202ENST00000527817 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.21□□□□□ -0.45
SRPRA-202ENST00000527817 ABCG8Q9H221 673 aa12.21□□□□□ -0.45
SRPRA-202ENST00000527817 SP110Q9HB58 689 aa12.21□□□□□ -0.45
SRPRA-202ENST00000527817 SIDT1Q9NXL6 827 aaKnown RBP12.21□□□□□ -0.45
SRPRA-202ENST00000527817 GOLGA6AQ9NYA3 693 aa12.21□□□□□ -0.45
SRPRA-202ENST00000527817 CROTQ9UKG9 612 aa12.21□□□□□ -0.45
SRPRA-202ENST00000527817 MAP4K5Q9Y4K4 846 aa12.21□□□□□ -0.45
SRPRA-202ENST00000527817 PCDHGA6Q9Y5G7 932 aa12.21□□□□□ -0.45
SRPRA-202ENST00000527817 ABCA12Q86UK0 2595 aa12.21□□□□□ -0.46
SRPRA-202ENST00000527817 SHANK1Q9Y566 2161 aa12.2□□□□□ -0.46
SRPRA-202ENST00000527817 TTC24A2A3L6 582 aaPredicted RBP12.2□□□□□ -0.46
SRPRA-202ENST00000527817 ANKRD62A6NC57 917 aa12.2□□□□□ -0.46
SRPRA-202ENST00000527817 DFFAO00273 331 aa12.2□□□□□ -0.46
SRPRA-202ENST00000527817 EEF2KO00418 725 aaKnown RBP12.2□□□□□ -0.46
SRPRA-202ENST00000527817 CREG1O75629 220 aa12.2□□□□□ -0.46
SRPRA-202ENST00000527817 SOD1P00441 154 aa12.2□□□□□ -0.46
SRPRA-202ENST00000527817 CPP00450 1065 aa12.2□□□□□ -0.46
SRPRA-202ENST00000527817 PDGFAP04085 211 aa12.2□□□□□ -0.46
SRPRA-202ENST00000527817 PYGLP06737 847 aa12.2□□□□□ -0.46
SRPRA-202ENST00000527817 ZNF28P17035 718 aa12.2□□□□□ -0.46
SRPRA-202ENST00000527817 ERCC2P18074 760 aa12.2□□□□□ -0.46
SRPRA-202ENST00000527817 LHCGRP22888 699 aa12.2□□□□□ -0.46
SRPRA-202ENST00000527817 SOX5P35711 763 aa12.2□□□□□ -0.46
SRPRA-202ENST00000527817 RPL7AP62424 266 aaKnown RBP12.2□□□□□ -0.46
SRPRA-202ENST00000527817 SLC10A7Q0GE19 358 aa12.2□□□□□ -0.46
SRPRA-202ENST00000527817 NFATC2Q13469 925 aa12.2□□□□□ -0.46
SRPRA-202ENST00000527817 IL11RAQ14626 422 aa12.2□□□□□ -0.46
SRPRA-202ENST00000527817 LBRQ14739 615 aaKnown RBP12.2□□□□□ -0.46
SRPRA-202ENST00000527817 CLEC16AQ2KHT3 1053 aa12.2□□□□□ -0.46
SRPRA-202ENST00000527817 ARHGAP36Q6ZRI8 547 aa12.2□□□□□ -0.46
SRPRA-202ENST00000527817 SLC9B2Q86UD5 537 aa12.2□□□□□ -0.46
SRPRA-202ENST00000527817 GALNT13Q8IUC8 556 aa12.2□□□□□ -0.46
SRPRA-202ENST00000527817 PDCD6IPQ8WUM4 868 aaKnown RBP12.2□□□□□ -0.46
SRPRA-202ENST00000527817 COX14Q96I36 57 aa12.2□□□□□ -0.46
SRPRA-202ENST00000527817 MCCC1Q96RQ3 725 aaPredicted RBP12.2□□□□□ -0.46
SRPRA-202ENST00000527817 NUDCD1Q96RS6 583 aa12.2□□□□□ -0.46
SRPRA-202ENST00000527817 ULBP3Q9BZM4 244 aa12.2□□□□□ -0.46
SRPRA-202ENST00000527817 VPS16Q9H269 839 aa12.2□□□□□ -0.46
SRPRA-202ENST00000527817 STN1Q9H668 368 aaKnown RBP12.2□□□□□ -0.46
SRPRA-202ENST00000527817 ZNHIT2Q9UHR6 403 aa12.2□□□□□ -0.46
SRPRA-202ENST00000527817 ANKRD17O75179 2603 aaKnown RBP12.2□□□□□ -0.46
SRPRA-202ENST00000527817 KIR2DS5A0A0G2JLQ3 304 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 A0A0G2JNG1 304 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 PIPSLA2A3N6 862 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 CDC14CA4D256 554 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 GOLGA6L3A6NEY3 463 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 NPIPB15A6NHN6 443 aaPredicted RBP12.19□□□□□ -0.46
SRPRA-202ENST00000527817 KIR2DS3K7RE56 304 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 PES1O00541 588 aaKnown RBP12.19□□□□□ -0.46
SRPRA-202ENST00000527817 TOX3O15405 576 aaPredicted RBP12.19□□□□□ -0.46
SRPRA-202ENST00000527817 DAPK3O43293 454 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 DNAJC6O75061 913 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 GADD45BO75293 160 aaPredicted RBP12.19□□□□□ -0.46
SRPRA-202ENST00000527817 KATNA1O75449 491 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 C9P02748 559 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 SLC2A4P14672 509 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 HSPA9P38646 679 aaKnown RBP12.19□□□□□ -0.46
SRPRA-202ENST00000527817 HCAR3P49019 387 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 PTSQ03393 145 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 FOXM1Q08050 763 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 SEMA5AQ13591 1074 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 KIR2DS5Q14953 304 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 RALGPS1Q5JS13 557 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 PPP1R15BQ5SWA1 713 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 ERMARDQ5T6L9 678 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 MARK2Q7KZI7 788 aaKnown RBP12.19□□□□□ -0.46
SRPRA-202ENST00000527817 MON1BQ7L1V2 547 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 ZNF765Q7L2R6 523 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 TSPAN33Q86UF1 283 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 GALNT6Q8NCL4 622 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 EXD1Q8NHP7 514 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 AP2M1Q96CW1 435 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 C9orf72Q96LT7 481 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 TWSG1Q9GZX9 223 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 GANQ9H2C0 597 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 NOD2Q9HC29 1040 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 TBC1D29Q9UFV1 150 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 KLHL3Q9UH77 587 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 PADI1Q9ULC6 663 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 AP4E1Q9UPM8 1137 aa12.19□□□□□ -0.46
SRPRA-202ENST00000527817 MN1Q10571 1320 aaPredicted RBP12.18□□□□□ -0.46
SRPRA-202ENST00000527817 A6NCN8 305 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 WIPF3A6NGB9 483 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 LILRA5A6NI73 299 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 OR5K4A6NMS3 321 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 PGLSO95336 258 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 CCNYL3P0C7X3 344 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 RNF224P0DH78 156 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 DESP17661 470 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 JAM2P57087 298 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 TRAF2Q12933 501 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 PTPRRQ15256 657 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 CA9Q16790 459 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 DNAJC24Q6P3W2 148 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 RFLNAQ6ZTI6 216 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 RFX8Q6ZV50 586 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms