RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 ZDHHC1Q8WTX9 485 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 GRAMD1AQ96CP6 724 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 ZNF830Q96NB3 372 aaPredicted RBP10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 AGAP3Q96P47 875 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 GFM1Q96RP9 751 aaKnown RBP10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 MAK16Q9BXY0 300 aaKnown RBP10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 DDX56Q9NY93 547 aaKnown RBP10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 SEPT10Q9P0V9 454 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 PCDHGA8Q9Y5G5 932 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 PCDHA13Q9Y5I0 950 aa10.38□□□□□ -0.75
PRPF40B-204ENST00000527253 CCDC187A0A096LP49 1063 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 C1orf232A0A0U1RR37 186 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 CDRT15L2A8MXV6 281 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 AGRPO00253 132 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 SPOPO43791 374 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 NUDT21O43809 227 aaKnown RBP10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 CST8O60676 142 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 DNAJC6O75061 913 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 TNFSF15O95150 251 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 ECEL1O95672 775 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 ATP1A1P05023 1023 aaKnown RBP10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 PIRTP0C851 137 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 HGFP14210 728 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 PNLIPP16233 465 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 ZFXP17010 805 aaPredicted RBP10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 PTPN3P26045 913 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 CD68P34810 354 aaPredicted RBP10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 SPINT3P49223 89 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 ZNF75DP51815 510 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 INHBCP55103 352 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 PCBP4P57723 403 aaKnown RBP10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 OR1D5P58170 312 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 WASHC5Q12768 1159 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 ILF3Q12906 894 aaKnown RBP eCLIP10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 PRKD1Q15139 912 aaPredicted RBP10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 ZNF648Q5T619 568 aaPredicted RBP10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 HENMT1Q5T8I9 393 aaKnown RBP10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 ZNF574Q6ZN55 896 aaPredicted RBP10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 LYSMD3Q7Z3D4 306 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 ZNF438Q7Z4V0 828 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 NT5DC3Q86UY8 548 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 GAS2L3Q86XJ1 694 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 ZNF248Q8NDW4 579 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 KRT35Q92764 455 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 LIN37Q96GY3 246 aaPredicted RBP10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 HERPUD2Q9BSE4 406 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 MLPHQ9BV36 600 aaPredicted RBP10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 GSDMCQ9BYG8 508 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 SLC25A51Q9H1U9 297 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 FAM83DQ9H4H8 585 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 GLOD4Q9HC38 313 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 EPB41L5Q9HCM4 733 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 SSUH2Q9Y2M2 353 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 REXO2Q9Y3B8 237 aaKnown RBP10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 PRKAB1Q9Y478 270 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 SPO11Q9Y5K1 396 aa10.37□□□□□ -0.75
PRPF40B-204ENST00000527253 TRBV23OR9-2A0A075B6M9 112 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 hCG_1818297A0A087WSY0 165 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 SOWAHDA6NJG2 315 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 AURKAO14965 403 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 PPP1R12AO14974 1030 aaPredicted RBP10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 PPM1DO15297 605 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 PSTPIP1O43586 416 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 MT-CYBP00156 380 aaPredicted RBP10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 CA4P22748 312 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 FECHP22830 423 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 RBMS1P29558 406 aaKnown RBP10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 CCKBRP32239 447 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 UGT1A5P35504 534 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 CFHR1Q03591 330 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 CDK18Q07002 472 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 NR1D2Q14995 579 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 PCSK7Q16549 785 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 TEX44Q53QW1 395 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 KAZNQ674X7 775 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 KDELC1Q6UW63 502 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 USP53Q70EK8 1073 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 RAB11FIP2Q7L804 512 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 TMC3Q7Z5M5 1100 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 CLEC14AQ86T13 490 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 SLITRK4Q8IW52 837 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 RAVER1Q8IY67 606 aaKnown RBP10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 KATNAL2Q8IYT4 538 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 GPR26Q8NDV2 337 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 EXD1Q8NHP7 514 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 KIAA1524Q8TCG1 905 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 TEKT5Q96M29 485 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 OR2M4Q96R27 311 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 SEMA6CQ9H3T2 930 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 C10orf88Q9H8K7 445 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 ARFGAP3Q9NP61 516 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 THSD1Q9NS62 852 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 UBP1Q9NZI7 540 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 DNPEPQ9ULA0 475 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 SHOC2Q9UQ13 582 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 DUSP10Q9Y6W6 482 aa10.36□□□□□ -0.75
PRPF40B-204ENST00000527253 SCN8AQ9UQD0 1980 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 RGSL1A5PLK6 1076 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 PLD2O14939 933 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms