RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 LMO7DNF2Z398 122 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 PHF2O75151 1096 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 CRTAMO95727 393 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 CEACAM5P06731 702 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 IVLP07476 585 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 GPR89BP0CG08 455 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 ALPPL2P10696 532 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 LPOP22079 712 aaPredicted RBP17.16■□□□□ 0.34
LMX1B-203ENST00000526117 PSMA3P25788 255 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 COILP38432 576 aaPredicted RBP17.16■□□□□ 0.34
LMX1B-203ENST00000526117 KCNJ1P48048 391 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 NOVA1P51513 510 aaKnown RBP17.16■□□□□ 0.34
LMX1B-203ENST00000526117 CDK16Q00536 496 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 ELOCQ15369 112 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 TTC27Q6P3X3 843 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 LVRNQ6Q4G3 990 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 GSTA5Q7RTV2 222 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 GATAD2AQ86YP4 633 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 CREG2Q8IUH2 290 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 PDCD7Q8N8D1 485 aaKnown RBP17.16■□□□□ 0.34
LMX1B-203ENST00000526117 FAM181AQ8N9Y4 354 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 DEFB124Q8NES8 71 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 BLOC1S5Q8TDH9 187 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 SETD7Q8WTS6 366 aaKnown RBP17.16■□□□□ 0.34
LMX1B-203ENST00000526117 OR1E3Q8WZA6 343 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 SLCO2A1Q92959 643 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 MAGOHBQ96A72 148 aaKnown RBP17.16■□□□□ 0.34
LMX1B-203ENST00000526117 AGAP2Q99490 1192 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 LRRC61Q9BV99 259 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 RAB6BQ9NRW1 208 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 NEU2Q9Y3R4 380 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 PKP3Q9Y446 797 aa17.16■□□□□ 0.34
LMX1B-203ENST00000526117 FADS2P1A8MWK0 482 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 ZNF185O15231 689 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 FANCGO15287 622 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 TNFSF14O43557 240 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 USP12O75317 370 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 DKK1O94907 266 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 TNFP01375 233 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 ETS1P14921 441 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 SPAM1P38567 509 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 MAGEA6P43360 314 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 ETF1P62495 437 aaKnown RBP17.15■□□□□ 0.34
LMX1B-203ENST00000526117 CDH17Q12864 832 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 OLIG2Q13516 323 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 TRIP6Q15654 476 aaKnown RBP17.15■□□□□ 0.34
LMX1B-203ENST00000526117 ZNF542PQ5EBM4 170 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 PPM1JQ5JR12 505 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 FAXCQ5TGI0 409 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 ARMC3Q5W041 872 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 PSAPL1Q6NUJ1 521 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 CCDC137Q6PK04 289 aaKnown RBP17.15■□□□□ 0.34
LMX1B-203ENST00000526117 GRK7Q8WTQ7 553 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 PDXPQ96GD0 296 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 CAMK1GQ96NX5 476 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 APOL2Q9BQE5 337 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 AP1M1Q9BXS5 423 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 RMI1Q9H9A7 625 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 SMOXQ9NWM0 555 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 UCKL1Q9NWZ5 548 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 TRNAU1APQ9NX07 287 aaKnown RBP17.15■□□□□ 0.34
LMX1B-203ENST00000526117 CABIN1Q9Y6J0 2220 aa17.15■□□□□ 0.34
LMX1B-203ENST00000526117 GOLGA8CPA6NN73 597 aa17.14■□□□□ 0.33
LMX1B-203ENST00000526117 AP3B1O00203 1094 aa17.14■□□□□ 0.33
LMX1B-203ENST00000526117 LDB2O43679 373 aa17.14■□□□□ 0.33
LMX1B-203ENST00000526117 SDC3O75056 442 aa17.14■□□□□ 0.33
LMX1B-203ENST00000526117 ZNF140P52738 457 aaPredicted RBP17.14■□□□□ 0.33
LMX1B-203ENST00000526117 LAMB3Q13751 1172 aa17.14■□□□□ 0.33
LMX1B-203ENST00000526117 SPARCL1Q14515 664 aa17.14■□□□□ 0.33
LMX1B-203ENST00000526117 PROX2Q3B8N5 592 aa17.14■□□□□ 0.33
LMX1B-203ENST00000526117 PRRT3Q5FWE3 981 aa17.14■□□□□ 0.33
LMX1B-203ENST00000526117 RBFAQ8N0V3 343 aa17.14■□□□□ 0.33
LMX1B-203ENST00000526117 GLYATL1Q969I3 302 aa17.14■□□□□ 0.33
LMX1B-203ENST00000526117 TSACCQ96A04 125 aaPredicted RBP17.14■□□□□ 0.33
LMX1B-203ENST00000526117 SPATA16Q9BXB7 569 aa17.14■□□□□ 0.33
LMX1B-203ENST00000526117 IL26Q9NPH9 171 aa17.14■□□□□ 0.33
LMX1B-203ENST00000526117 CASS4Q9NQ75 786 aa17.14■□□□□ 0.33
LMX1B-203ENST00000526117 NCKIPSDQ9NZQ3 722 aa17.14■□□□□ 0.33
LMX1B-203ENST00000526117 FTSJ1Q9UET6 329 aa17.14■□□□□ 0.33
LMX1B-203ENST00000526117 APPL1Q9UKG1 709 aa17.14■□□□□ 0.33
LMX1B-203ENST00000526117 RIMKLBQ9ULI2 386 aa17.14■□□□□ 0.33
LMX1B-203ENST00000526117 ARL5AQ9Y689 179 aa17.14■□□□□ 0.33
LMX1B-203ENST00000526117 E7EVH7 732 aa17.13■□□□□ 0.33
LMX1B-203ENST00000526117 H7C0S8 307 aa17.13■□□□□ 0.33
LMX1B-203ENST00000526117 GAPDHSO14556 408 aaPredicted RBP17.13■□□□□ 0.33
LMX1B-203ENST00000526117 STX7O15400 261 aaKnown RBP17.13■□□□□ 0.33
LMX1B-203ENST00000526117 ZSCAN5DPP0CG00 497 aa17.13■□□□□ 0.33
LMX1B-203ENST00000526117 TPSB2P20231 275 aa17.13■□□□□ 0.33
LMX1B-203ENST00000526117 HADHAP40939 763 aa17.13■□□□□ 0.33
LMX1B-203ENST00000526117 ITGA9Q13797 1035 aa17.13■□□□□ 0.33
LMX1B-203ENST00000526117 TPSAB1Q15661 275 aa17.13■□□□□ 0.33
LMX1B-203ENST00000526117 ZCCHC8Q6NZY4 707 aaKnown RBP17.13■□□□□ 0.33
LMX1B-203ENST00000526117 NYAP1Q6ZVC0 841 aa17.13■□□□□ 0.33
LMX1B-203ENST00000526117 GKN2Q86XP6 184 aa17.13■□□□□ 0.33
LMX1B-203ENST00000526117 PHYKPLQ8IUZ5 450 aa17.13■□□□□ 0.33
LMX1B-203ENST00000526117 HID1Q8IV36 788 aa17.13■□□□□ 0.33
LMX1B-203ENST00000526117 EID2Q8N6I1 236 aa17.13■□□□□ 0.33
LMX1B-203ENST00000526117 PEX13Q92968 403 aa17.13■□□□□ 0.33
LMX1B-203ENST00000526117 RUNDC3BQ96NL0 473 aa17.13■□□□□ 0.33
LMX1B-203ENST00000526117 RANBP9Q96S59 729 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms