RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 ZNF423Q2M1K9 1284 aa20.65■□□□□ 0.9
CD44-222ENST00000526025 PCID2Q5JVF3 399 aa20.65■□□□□ 0.9
CD44-222ENST00000526025 CERCAMQ5T4B2 595 aa20.65■□□□□ 0.9
CD44-222ENST00000526025 TCEAL6Q6IPX3 200 aa20.65■□□□□ 0.9
CD44-222ENST00000526025 LAYNQ6UX15 382 aa20.65■□□□□ 0.9
CD44-222ENST00000526025 CAND1Q86VP6 1230 aaKnown RBP20.65■□□□□ 0.9
CD44-222ENST00000526025 SPATS2Q86XZ4 545 aaKnown RBP20.65■□□□□ 0.9
CD44-222ENST00000526025 PELI3Q8N2H9 469 aa20.65■□□□□ 0.9
CD44-222ENST00000526025 DCLK2Q8N568 766 aa20.65■□□□□ 0.9
CD44-222ENST00000526025 OR4K2Q8NGD2 314 aa20.65■□□□□ 0.9
CD44-222ENST00000526025 TCEAL3Q969E4 200 aa20.65■□□□□ 0.9
CD44-222ENST00000526025 SERPINB12Q96P63 405 aa20.65■□□□□ 0.9
CD44-222ENST00000526025 RAB17Q9H0T7 212 aa20.65■□□□□ 0.9
CD44-222ENST00000526025 SMOC1Q9H4F8 434 aa20.65■□□□□ 0.9
CD44-222ENST00000526025 L2HGDHQ9H9P8 463 aa20.65■□□□□ 0.9
CD44-222ENST00000526025 MRM3Q9HC36 420 aaKnown RBP20.65■□□□□ 0.9
CD44-222ENST00000526025 IL26Q9NPH9 171 aa20.65■□□□□ 0.9
CD44-222ENST00000526025 NLE1Q9NVX2 485 aaPredicted RBP20.65■□□□□ 0.9
CD44-222ENST00000526025 APPL1Q9UKG1 709 aa20.65■□□□□ 0.9
CD44-222ENST00000526025 TCAF1Q9Y4C2 921 aa20.65■□□□□ 0.9
CD44-222ENST00000526025 SNX11Q9Y5W9 270 aa20.65■□□□□ 0.9
CD44-222ENST00000526025 YKT6O15498 198 aa20.64■□□□□ 0.89
CD44-222ENST00000526025 CDK3Q00526 305 aa20.64■□□□□ 0.89
CD44-222ENST00000526025 PDE1CQ14123 709 aaPredicted RBP20.64■□□□□ 0.89
CD44-222ENST00000526025 SF3A2Q15428 464 aaKnown RBP20.64■□□□□ 0.89
CD44-222ENST00000526025 KCTD19Q17RG1 926 aaPredicted RBP20.64■□□□□ 0.89
CD44-222ENST00000526025 SKIDA1Q1XH10 827 aa20.64■□□□□ 0.89
CD44-222ENST00000526025 HIBCHQ6NVY1 386 aaPredicted RBP20.64■□□□□ 0.89
CD44-222ENST00000526025 C8orf74Q6P047 294 aa20.64■□□□□ 0.89
CD44-222ENST00000526025 PARGQ86W56 976 aa20.64■□□□□ 0.89
CD44-222ENST00000526025 HEATR4Q86WZ0 1026 aa20.64■□□□□ 0.89
CD44-222ENST00000526025 PPHLN1Q8NEY8 458 aaKnown RBP20.64■□□□□ 0.89
CD44-222ENST00000526025 FUBP1Q96AE4 644 aaKnown RBP20.64■□□□□ 0.89
CD44-222ENST00000526025 COX14Q96I36 57 aa20.64■□□□□ 0.89
CD44-222ENST00000526025 VPS35Q96QK1 796 aa20.64■□□□□ 0.89
CD44-222ENST00000526025 BPIFA1Q9NP55 256 aa20.64■□□□□ 0.89
CD44-222ENST00000526025 PIH1D1Q9NWS0 290 aaKnown RBP20.64■□□□□ 0.89
CD44-222ENST00000526025 WHRNQ9P202 907 aa20.64■□□□□ 0.89
CD44-222ENST00000526025 UTP11Q9Y3A2 253 aaKnown RBP20.64■□□□□ 0.89
CD44-222ENST00000526025 OR1A2Q9Y585 309 aa20.64■□□□□ 0.89
CD44-222ENST00000526025 GLYATL1P3A0A0U1RQE8 302 aa20.63■□□□□ 0.89
CD44-222ENST00000526025 GOLGA8CPA6NN73 597 aa20.63■□□□□ 0.89
CD44-222ENST00000526025 TNFRSF10CO14798 259 aa20.63■□□□□ 0.89
CD44-222ENST00000526025 ZNF883P0CG24 379 aa20.63■□□□□ 0.89
CD44-222ENST00000526025 RXRGP48443 463 aa20.63■□□□□ 0.89
CD44-222ENST00000526025 DRG2P55039 364 aaKnown RBP20.63■□□□□ 0.89
CD44-222ENST00000526025 SESN2P58004 480 aaPredicted RBP20.63■□□□□ 0.89
CD44-222ENST00000526025 ACVR1Q04771 509 aa20.63■□□□□ 0.89
CD44-222ENST00000526025 CBLBQ13191 982 aa20.63■□□□□ 0.89
CD44-222ENST00000526025 ITGA9Q13797 1035 aa20.63■□□□□ 0.89
CD44-222ENST00000526025 SEPT6Q14141 434 aa20.63■□□□□ 0.89
CD44-222ENST00000526025 FZD2Q14332 565 aa20.63■□□□□ 0.89
CD44-222ENST00000526025 GLE1Q53GS7 698 aaKnown RBP20.63■□□□□ 0.89
CD44-222ENST00000526025 DUPD1Q68J44 220 aa20.63■□□□□ 0.89
CD44-222ENST00000526025 HIC2Q96JB3 615 aa20.63■□□□□ 0.89
CD44-222ENST00000526025 WDR92Q96MX6 357 aa20.63■□□□□ 0.89
CD44-222ENST00000526025 KIFC1Q9BW19 673 aa20.63■□□□□ 0.89
CD44-222ENST00000526025 SPATA16Q9BXB7 569 aa20.63■□□□□ 0.89
CD44-222ENST00000526025 DNAAF2Q9NVR5 837 aaKnown RBP20.63■□□□□ 0.89
CD44-222ENST00000526025 SMOXQ9NWM0 555 aa20.63■□□□□ 0.89
CD44-222ENST00000526025 KCTD3Q9Y597 815 aa20.63■□□□□ 0.89
CD44-222ENST00000526025 MAGEB16A2A368 324 aa20.62■□□□□ 0.89
CD44-222ENST00000526025 FADS2P1A8MWK0 482 aa20.62■□□□□ 0.89
CD44-222ENST00000526025 GAPDHSO14556 408 aaPredicted RBP20.62■□□□□ 0.89
CD44-222ENST00000526025 RPL21P46778 160 aaKnown RBP20.62■□□□□ 0.89
CD44-222ENST00000526025 HLA-BQ31612 363 aa20.62■□□□□ 0.89
CD44-222ENST00000526025 TSTD2Q5T7W7 516 aa20.62■□□□□ 0.89
CD44-222ENST00000526025 ALS2CLQ60I27 953 aa20.62■□□□□ 0.89
CD44-222ENST00000526025 SEC14L1Q92503 715 aa20.62■□□□□ 0.89
CD44-222ENST00000526025 SGSM3Q96HU1 749 aa20.62■□□□□ 0.89
CD44-222ENST00000526025 DNAJC1Q96KC8 554 aaKnown RBP20.62■□□□□ 0.89
CD44-222ENST00000526025 TBATAQ96M53 351 aa20.62■□□□□ 0.89
CD44-222ENST00000526025 AGAP2Q99490 1192 aa20.62■□□□□ 0.89
CD44-222ENST00000526025 ELF4Q99607 663 aaPredicted RBP20.62■□□□□ 0.89
CD44-222ENST00000526025 CNOT6Q9ULM6 557 aaKnown RBP20.62■□□□□ 0.89
CD44-222ENST00000526025 SOX13Q9UN79 622 aa20.62■□□□□ 0.89
CD44-222ENST00000526025 TDRD6O60522 2096 aaKnown RBP20.62■□□□□ 0.89
CD44-222ENST00000526025 SDR42E2A6NKP2 422 aa20.61■□□□□ 0.89
CD44-222ENST00000526025 AGAP14A8MT82 685 aa20.61■□□□□ 0.89
CD44-222ENST00000526025 TP73O15350 636 aa20.61■□□□□ 0.89
CD44-222ENST00000526025 BUD23O43709 281 aaKnown RBP20.61■□□□□ 0.89
CD44-222ENST00000526025 MGAT1P26572 445 aa20.61■□□□□ 0.89
CD44-222ENST00000526025 ARRB1P49407 418 aaPredicted RBP20.61■□□□□ 0.89
CD44-222ENST00000526025 LIMK1P53667 647 aa20.61■□□□□ 0.89
CD44-222ENST00000526025 ITGA8P53708 1063 aa20.61■□□□□ 0.89
CD44-222ENST00000526025 ATXN3P54252 364 aaPredicted RBP20.61■□□□□ 0.89
CD44-222ENST00000526025 TERF1P54274 439 aa20.61■□□□□ 0.89
CD44-222ENST00000526025 XIAPP98170 497 aa20.61■□□□□ 0.89
CD44-222ENST00000526025 CALCOCO2Q13137 446 aa20.61■□□□□ 0.89
CD44-222ENST00000526025 TPRG1LQ5T0D9 272 aa20.61■□□□□ 0.89
CD44-222ENST00000526025 KDM7AQ6ZMT4 941 aa20.61■□□□□ 0.89
CD44-222ENST00000526025 OR13C4Q8NGS5 318 aa20.61■□□□□ 0.89
CD44-222ENST00000526025 BTN2A2Q8WVV5 523 aa20.61■□□□□ 0.89
CD44-222ENST00000526025 GLYATL1Q969I3 302 aa20.61■□□□□ 0.89
CD44-222ENST00000526025 EDEM2Q9BV94 578 aa20.61■□□□□ 0.89
CD44-222ENST00000526025 GAREM1Q9H706 876 aa20.61■□□□□ 0.89
CD44-222ENST00000526025 SYBUQ9NX95 663 aa20.61■□□□□ 0.89
CD44-222ENST00000526025 VPS18Q9P253 973 aa20.61■□□□□ 0.89
CD44-222ENST00000526025 FKBPLQ9UIM3 349 aa20.61■□□□□ 0.89
CD44-222ENST00000526025 ANAPC5Q9UJX4 755 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms