RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 MIPEPQ99797 713 aa15.22■□□□□ 0.03
BEST1-204ENST00000524926 WDR55Q9H6Y2 383 aaPredicted RBP15.22■□□□□ 0.03
BEST1-204ENST00000524926 TAS2R1Q9NYW7 299 aa15.22■□□□□ 0.03
BEST1-204ENST00000524926 GTSE1Q9NYZ3 720 aa15.22■□□□□ 0.03
BEST1-204ENST00000524926 SLCO3A1Q9UIG8 710 aa15.22■□□□□ 0.03
BEST1-204ENST00000524926 MRPS23Q9Y3D9 190 aaKnown RBP15.22■□□□□ 0.03
BEST1-204ENST00000524926 NOTCH4Q99466 2003 aa15.21■□□□□ 0.03
BEST1-204ENST00000524926 SLCO1B7G3V0H7 640 aa15.21■□□□□ 0.03
BEST1-204ENST00000524926 SMIM24O75264 130 aa15.21■□□□□ 0.03
BEST1-204ENST00000524926 PYGLP06737 847 aa15.21■□□□□ 0.03
BEST1-204ENST00000524926 HK2P52789 917 aa15.21■□□□□ 0.03
BEST1-204ENST00000524926 CACNG1Q06432 222 aa15.21■□□□□ 0.03
BEST1-204ENST00000524926 SH2D4BQ5SQS7 431 aa15.21■□□□□ 0.03
BEST1-204ENST00000524926 C22orf39Q6P5X5 142 aa15.21■□□□□ 0.03
BEST1-204ENST00000524926 FAM151BQ6UXP7 276 aa15.21■□□□□ 0.03
BEST1-204ENST00000524926 ADGRG2Q8IZP9 1017 aa15.21■□□□□ 0.03
BEST1-204ENST00000524926 OR52B2Q96RD2 323 aa15.21■□□□□ 0.03
BEST1-204ENST00000524926 CADM1Q9BY67 442 aaKnown RBP15.21■□□□□ 0.03
BEST1-204ENST00000524926 TCF7L2Q9NQB0 619 aa15.21■□□□□ 0.03
BEST1-204ENST00000524926 VTI1BQ9UEU0 232 aa15.21■□□□□ 0.03
BEST1-204ENST00000524926 MED16Q9Y2X0 877 aa15.21■□□□□ 0.03
BEST1-204ENST00000524926 H3BMM5 538 aa15.21■□□□□ 0.02
BEST1-204ENST00000524926 ZNF197O14709 1029 aa15.21■□□□□ 0.02
BEST1-204ENST00000524926 GRID2O43424 1007 aa15.21■□□□□ 0.02
BEST1-204ENST00000524926 NIPSNAP2O75323 286 aa15.21■□□□□ 0.02
BEST1-204ENST00000524926 VPS26AO75436 327 aa15.21■□□□□ 0.02
BEST1-204ENST00000524926 CEBPBP17676 345 aa15.21■□□□□ 0.02
BEST1-204ENST00000524926 CHRM3P20309 590 aa15.21■□□□□ 0.02
BEST1-204ENST00000524926 SERPINB5P36952 375 aa15.21■□□□□ 0.02
BEST1-204ENST00000524926 ECT2LQ008S8 904 aa15.21■□□□□ 0.02
BEST1-204ENST00000524926 RAD51Q06609 339 aa15.21■□□□□ 0.02
BEST1-204ENST00000524926 PDCD2Q16342 344 aaPredicted RBP15.21■□□□□ 0.02
BEST1-204ENST00000524926 ZSWIM9Q86XI8 627 aa15.21■□□□□ 0.02
BEST1-204ENST00000524926 TEX9Q8N6V9 391 aa15.21■□□□□ 0.02
BEST1-204ENST00000524926 CERS4Q9HA82 394 aa15.21■□□□□ 0.02
BEST1-204ENST00000524926 ZDHHC7Q9NXF8 308 aa15.21■□□□□ 0.02
BEST1-204ENST00000524926 GALPQ9UBC7 116 aa15.21■□□□□ 0.02
BEST1-204ENST00000524926 DPP7Q9UHL4 492 aa15.21■□□□□ 0.02
BEST1-204ENST00000524926 FIS1Q9Y3D6 152 aa15.21■□□□□ 0.02
BEST1-204ENST00000524926 PRRC2BQ5JSZ5 2229 aaKnown RBP15.2■□□□□ 0.02
BEST1-204ENST00000524926 SOBPA7XYQ1 873 aa15.2■□□□□ 0.02
BEST1-204ENST00000524926 E5RI56 91 aa15.2■□□□□ 0.02
BEST1-204ENST00000524926 SPECC1L-ADORA2AF8WAN1 911 aa15.2■□□□□ 0.02
BEST1-204ENST00000524926 GSC2O15499 205 aa15.2■□□□□ 0.02
BEST1-204ENST00000524926 SUPT7LO94864 414 aa15.2■□□□□ 0.02
BEST1-204ENST00000524926 TPBGLP0DKB5 382 aa15.2■□□□□ 0.02
BEST1-204ENST00000524926 AOC1P19801 751 aa15.2■□□□□ 0.02
BEST1-204ENST00000524926 IMPDH1P20839 514 aa15.2■□□□□ 0.02
BEST1-204ENST00000524926 EPHA3P29320 983 aa15.2■□□□□ 0.02
BEST1-204ENST00000524926 PTGER3P43115 390 aa15.2■□□□□ 0.02
BEST1-204ENST00000524926 SEMG2Q02383 582 aa15.2■□□□□ 0.02
BEST1-204ENST00000524926 GPM6BQ13491 265 aa15.2■□□□□ 0.02
BEST1-204ENST00000524926 OR4D1Q15615 310 aa15.2■□□□□ 0.02
BEST1-204ENST00000524926 SETMARQ53H47 684 aaPredicted RBP15.2■□□□□ 0.02
BEST1-204ENST00000524926 ELMSAN1Q6PJG2 1045 aa15.2■□□□□ 0.02
BEST1-204ENST00000524926 MYLIPQ8WY64 445 aa15.2■□□□□ 0.02
BEST1-204ENST00000524926 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.2■□□□□ 0.02
BEST1-204ENST00000524926 MCUR1Q96AQ8 359 aa15.2■□□□□ 0.02
BEST1-204ENST00000524926 ISG20Q96AZ6 181 aaKnown RBP15.2■□□□□ 0.02
BEST1-204ENST00000524926 ZDHHC6Q9H6R6 413 aa15.2■□□□□ 0.02
BEST1-204ENST00000524926 EML4Q9HC35 981 aaKnown RBP15.2■□□□□ 0.02
BEST1-204ENST00000524926 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.2■□□□□ 0.02
BEST1-204ENST00000524926 CAPN8A6NHC0 703 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 TMEM233B4DJY2 109 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 TRIM24O15164 1050 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 DCXO43602 365 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 PRAMEF1O95521 474 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 WEE1P30291 646 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 CCNHP51946 323 aaPredicted RBP15.19■□□□□ 0.02
BEST1-204ENST00000524926 MXRA7P84157 204 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 RIPK1Q13546 671 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 CTSL3PQ5NE16 218 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 C9orf50Q5SZB4 431 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 DPY19L3Q6ZPD9 716 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 C12orf76Q8N812 135 aaPredicted RBP15.19■□□□□ 0.02
BEST1-204ENST00000524926 KDM1BQ8NB78 822 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 SIDT2Q8NBJ9 832 aaKnown RBP15.19■□□□□ 0.02
BEST1-204ENST00000524926 ITFG1Q8TB96 612 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 ZNF707Q96C28 371 aaPredicted RBP15.19■□□□□ 0.02
BEST1-204ENST00000524926 OSBPL1AQ9BXW6 950 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 SUV39H2Q9H5I1 410 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 TFB2MQ9H5Q4 396 aaKnown RBP15.19■□□□□ 0.02
BEST1-204ENST00000524926 SARS2Q9NP81 518 aaKnown RBP15.19■□□□□ 0.02
BEST1-204ENST00000524926 TRMT6Q9UJA5 497 aaKnown RBP15.19■□□□□ 0.02
BEST1-204ENST00000524926 CXorf51AA0A1B0GTR3 108 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 UBXN8O00124 270 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 SNUPNO95149 360 aaKnown RBP15.19■□□□□ 0.02
BEST1-204ENST00000524926 SULT2A1Q06520 285 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 CARD16Q5EG05 197 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 METTL21CQ5VZV1 264 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 NXNQ6DKJ4 435 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 ACAD11Q709F0 780 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 STK40Q8N2I9 435 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 ZNF557Q8N988 423 aaPredicted RBP15.19■□□□□ 0.02
BEST1-204ENST00000524926 FAM13CQ8NE31 585 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 RHEBL1Q8TAI7 183 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 STAG3L4Q8TBR4 150 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 SLC30A3Q99726 388 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 DERL2Q9GZP9 239 aa15.19■□□□□ 0.02
BEST1-204ENST00000524926 ASB8Q9H765 288 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms