RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 ENO3P13929 434 aaPredicted RBP1.75□□□□□ -2.13
CD44-212ENST00000524922 MYL6BP14649 208 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 DAOP14920 347 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 ABCB4P21439 1286 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 CCND3P30281 292 aaPredicted RBP1.75□□□□□ -2.13
CD44-212ENST00000524922 AKT1P31749 480 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 CYP2J2P51589 502 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 CRIP2P52943 208 aaPredicted RBP1.75□□□□□ -2.13
CD44-212ENST00000524922 ACLYP53396 1101 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 LIMK1P53667 647 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 OAZ1P54368 228 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 DLG1Q12959 904 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 PRKG1Q13976 671 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 LONRF1Q17RB8 773 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 KRT71Q3SY84 523 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 RABL6Q3YEC7 729 aaPredicted RBP1.75□□□□□ -2.13
CD44-212ENST00000524922 OTUD3Q5T2D3 398 aaPredicted RBP1.75□□□□□ -2.13
CD44-212ENST00000524922 TMEM184AQ6ZMB5 413 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 MCM10Q7L590 875 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 WDR5BQ86VZ2 330 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 NAGSQ8N159 534 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 CIARTQ8N365 385 aaPredicted RBP1.75□□□□□ -2.13
CD44-212ENST00000524922 PGBD5Q8N414 524 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 DPP10Q8N608 796 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 OR4N2Q8NGD1 307 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 FAM71BQ8TC56 605 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 AFAP1L1Q8TED9 768 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 TMEM18Q96B42 140 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 SCMH1Q96GD3 660 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 NECTIN4Q96NY8 510 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 IL17FQ96PD4 163 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 TGS1Q96RS0 853 aaKnown RBP1.75□□□□□ -2.13
CD44-212ENST00000524922 SIN3AQ96ST3 1273 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 PRPF18Q99633 342 aaKnown RBP1.75□□□□□ -2.13
CD44-212ENST00000524922 RAD9AQ99638 391 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 RTP3Q9BQQ7 232 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 HERC2P3Q9BVR0 1158 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 TMEM120AQ9BXJ8 343 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 NPFFR1Q9GZQ6 430 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 TDRD3Q9H7E2 651 aaKnown RBP1.75□□□□□ -2.13
CD44-212ENST00000524922 CERS4Q9HA82 394 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 PDE11AQ9HCR9 933 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 PRDM8Q9NQV8 689 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 HOXC10Q9NYD6 342 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 UPB1Q9UBR1 384 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 STK39Q9UEW8 545 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 TSPYL4Q9UJ04 414 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 PNMA2Q9UL42 364 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 PHTF1Q9UMS5 762 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 RRP7AQ9Y3A4 280 aaKnown RBP1.75□□□□□ -2.13
CD44-212ENST00000524922 LRRFIP2Q9Y608 721 aaKnown RBP1.75□□□□□ -2.13
CD44-212ENST00000524922 FRYLO94915 3013 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 IGSF10Q6WRI0 2623 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 DOCK1Q14185 1865 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 PLXNB2O15031 1838 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 DSPP15924 2871 aaKnown RBP1.74□□□□□ -2.13
CD44-212ENST00000524922 MYH3P11055 1940 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 MAPK8IP3Q9UPT6 1336 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 FRYQ5TBA9 3013 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 ABCA2Q9BZC7 2435 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 GPR75-ASB3A0A0A6YYF3 556 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 TARSL2A2RTX5 802 aaKnown RBP1.74□□□□□ -2.13
CD44-212ENST00000524922 MAGEA13PA6NCF6 341 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 SAC3D1A6NKF1 404 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 TCP10L2B9ZVM9 353 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 TCERG1O14776 1098 aaKnown RBP1.74□□□□□ -2.13
CD44-212ENST00000524922 CIAO1O76071 339 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 IGKV5-2P06315 115 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 ACP5P13686 325 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 CHN1P15882 459 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 HOXB8P17481 243 aaPredicted RBP1.74□□□□□ -2.13
CD44-212ENST00000524922 CYP2B6P20813 491 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 PIP4K2AP48426 406 aaPredicted RBP1.74□□□□□ -2.13
CD44-212ENST00000524922 NT5C2P49902 561 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 CLCNKBP51801 687 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 RBM5P52756 815 aaKnown RBP eCLIP1.74□□□□□ -2.13
CD44-212ENST00000524922 RHBDL3P58872 404 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 GSTO1P78417 241 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 UBE3AQ05086 875 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 MYBPHQ13203 477 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 SNTA1Q13424 505 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 HDAC1Q13547 482 aaPredicted RBP1.74□□□□□ -2.13
CD44-212ENST00000524922 PTK2BQ14289 1009 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 SPARCL1Q14515 664 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 PUM3Q15397 648 aaKnown RBP1.74□□□□□ -2.13
CD44-212ENST00000524922 FCN2Q15485 313 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 RPE65Q16518 533 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 TBRG1Q3YBR2 411 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 ZACNQ401N2 412 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 GXYLT1Q4G148 440 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 ZNF569Q5MCW4 686 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 CCDC30Q5VVM6 783 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 RETSATQ6NUM9 610 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 CDC42EP5Q6NZY7 148 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 NFRKBQ6P4R8 1299 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 CYP26C1Q6V0L0 522 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 C9orf139Q6ZV77 190 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 MON1BQ7L1V2 547 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 GALNT7Q86SF2 657 aa1.74□□□□□ -2.13
CD44-212ENST00000524922 KRTAP7-1Q8IUC3 87 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms