RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 RAD52P43351 418 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 SLC15A1P46059 708 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 ABATP80404 500 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 MRPS5P82675 430 aaKnown RBP3.93□□□□□ -1.78
SKP1-212ENST00000523966 ECT2LQ008S8 904 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 CRYZQ08257 329 aaKnown RBP3.93□□□□□ -1.78
SKP1-212ENST00000523966 GRSF1Q12849 480 aaKnown RBP eCLIP3.93□□□□□ -1.78
SKP1-212ENST00000523966 CDC16Q13042 620 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 GAGE1Q13065 139 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 GAGE4Q13068 117 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 KCNC3Q14003 757 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 IRF3Q14653 427 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 ASTE1Q2TB18 679 aaPredicted RBP3.93□□□□□ -1.78
SKP1-212ENST00000523966 SOWAHCQ53LP3 525 aaPredicted RBP3.93□□□□□ -1.78
SKP1-212ENST00000523966 LRIF1Q5T3J3 769 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 HIST2H2BCQ6DN03 193 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 HIST2H2BDQ6DRA6 164 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 GPR139Q6DWJ6 353 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 DUS1LQ6P1R4 473 aaKnown RBP3.93□□□□□ -1.78
SKP1-212ENST00000523966 C1QL2Q7Z5L3 287 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 SDCCAG8Q86SQ7 713 aaPredicted RBP3.93□□□□□ -1.78
SKP1-212ENST00000523966 FAM216AQ8WUB2 273 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 SNRNP27Q8WVK2 155 aaKnown RBP3.93□□□□□ -1.78
SKP1-212ENST00000523966 ZNF48Q96MX3 618 aaPredicted RBP3.93□□□□□ -1.78
SKP1-212ENST00000523966 OR2A14Q96R47 310 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 HAUS8Q9BT25 410 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 TMEM39BQ9GZU3 492 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 HRH4Q9H3N8 390 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 GIMAP4Q9NUV9 329 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 SETD4Q9NVD3 440 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 WNT16Q9UBV4 365 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 SLC9A2Q9UBY0 812 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 STK39Q9UEW8 545 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 ZNF644Q9H582 1327 aaPredicted RBP3.93□□□□□ -1.78
SKP1-212ENST00000523966 LOC100509620A0A075B734 347 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 GOLGA6L9A6NEM1 432 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 EIF4E1BA6NMX2 242 aaKnown RBP3.92□□□□□ -1.78
SKP1-212ENST00000523966 M0QZ24 198 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 TCERG1O14776 1098 aaKnown RBP3.92□□□□□ -1.78
SKP1-212ENST00000523966 TOMM40O96008 361 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 ACSL1P33121 698 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 KRT20P35900 424 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 CDKN2AP42771 156 aaKnown RBP3.92□□□□□ -1.78
SKP1-212ENST00000523966 MSH2P43246 934 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 NRIP1P48552 1158 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 Q0VFX4 171 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 PRPF4BQ13523 1007 aaKnown RBP3.92□□□□□ -1.78
SKP1-212ENST00000523966 CALCRLQ16602 461 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 ZNF805Q5CZA5 627 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 XKR9Q5GH70 373 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 PMS2CLQ68D20 193 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 RGMBQ6NW40 437 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 C8orf82Q6P1X6 216 aaPredicted RBP3.92□□□□□ -1.78
SKP1-212ENST00000523966 FAM122CQ6P4D5 195 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 WDR73Q6P4I2 378 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 CCDC190Q86UF4 302 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 ADHFE1Q8IWW8 467 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 OR1J2Q8NGS2 313 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 APBB2Q92870 758 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 GAD1Q99259 594 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 SRSF8Q9BRL6 282 aaKnown RBP3.92□□□□□ -1.78
SKP1-212ENST00000523966 EBF3Q9H4W6 596 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 MAGIXQ9H6Y5 334 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 EPB41L5Q9HCM4 733 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 LTB4R2Q9NPC1 389 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 NKIRAS2Q9NYR9 191 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 CPSF2Q9P2I0 782 aaKnown RBP3.92□□□□□ -1.78
SKP1-212ENST00000523966 POLG2Q9UHN1 485 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 DBNLQ9UJU6 430 aaKnown RBP3.92□□□□□ -1.78
SKP1-212ENST00000523966 PCDHA7Q9UN72 937 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 LOXL2Q9Y4K0 774 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 NFS1Q9Y697 457 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 RB1CC1Q8TDY2 1594 aa3.92□□□□□ -1.78
SKP1-212ENST00000523966 A0A0U1RQJ8 604 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 CPED1A4D0V7 1026 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 SOCS6O14544 535 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 IPO8O15397 1037 aaKnown RBP3.91□□□□□ -1.78
SKP1-212ENST00000523966 TIMM44O43615 452 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 MITFO75030 526 aaPredicted RBP3.91□□□□□ -1.78
SKP1-212ENST00000523966 NDUFS7O75251 213 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 GJB3O75712 270 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 SRCP12931 536 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 AKR1B1P15121 316 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 ARRB2P32121 409 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 CLCNKAP51800 687 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 GPR143P51810 404 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 STAT2P52630 851 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 SEC61BP60468 96 aaKnown RBP3.91□□□□□ -1.78
SKP1-212ENST00000523966 PDE1BQ01064 536 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 DDR1Q08345 913 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 SREBF2Q12772 1141 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 KRT33BQ14525 404 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 EFNB3Q15768 340 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 C15orf59Q2T9L4 293 aaPredicted RBP3.91□□□□□ -1.78
SKP1-212ENST00000523966 MYLK3Q32MK0 819 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 ATP13A5Q4VNC0 1218 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 FRG2Q64ET8 278 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 GPR180Q86V85 440 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 MCEMP1Q8IX19 187 aa3.91□□□□□ -1.78
SKP1-212ENST00000523966 OR8H2Q8N162 312 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms