RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 CDK5RAP1Q96SZ6 601 aaKnown RBP10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 BPIFA1Q9NP55 256 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 FKBPLQ9UIM3 349 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 RNF112Q9ULX5 631 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 BTRCQ9Y297 605 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 RAI2Q9Y5P3 530 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 LAMA2P24043 3122 aaKnown RBP10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 ILVBLA1L0T0 632 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 GPR39O43194 453 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 NRP2O60462 931 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 DNAJA2O60884 412 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 KERAO60938 352 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 NDUFS3O75489 264 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 ECI2O75521 394 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 CD160O95971 181 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 HOXD10P28358 340 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 PSMD8P48556 350 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 ARF5P84085 180 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 ECT2LQ008S8 904 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 NOGQ13253 232 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 ZNF177Q13360 481 aaPredicted RBP10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 TRIM25Q14258 630 aaKnown RBP10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 PDK3Q15120 406 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 TLR1Q15399 786 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 PTPRNQ16849 979 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 PITRM1Q5JRX3 1037 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 IL23RQ5VWK5 629 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 CXorf57Q6NSI4 855 aaKnown RBP10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 RAB44Q7Z6P3 723 aaPredicted RBP10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 TICAM1Q8IUC6 712 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 PHYKPLQ8IUZ5 450 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 APLFQ8IW19 511 aaPredicted RBP10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 PXYLP1Q8TE99 480 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 DLG3Q92796 817 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 LRCH3Q96II8 777 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 BTBD9Q96Q07 612 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 SLC25A23Q9BV35 468 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 MRPL9Q9BYD2 267 aaKnown RBP10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 DERL2Q9GZP9 239 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 TAS2R13Q9NYV9 303 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 SUCOQ9UBS9 1254 aaKnown RBP10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 BCAP29Q9UHQ4 241 aa10.71□□□□□ -0.69
RAB11FIP1-204ENST00000522774 NPEPPSL1A6NEC2 478 aa10.71□□□□□ -0.7
RAB11FIP1-204ENST00000522774 NCF1BA6NI72 391 aaPredicted RBP10.71□□□□□ -0.7
RAB11FIP1-204ENST00000522774 NCF1CA8MVU1 366 aaPredicted RBP10.71□□□□□ -0.7
RAB11FIP1-204ENST00000522774 NIPSNAP2O75323 286 aa10.71□□□□□ -0.7
RAB11FIP1-204ENST00000522774 FGF4P08620 206 aa10.71□□□□□ -0.7
RAB11FIP1-204ENST00000522774 NCF1P14598 390 aaPredicted RBP10.71□□□□□ -0.7
RAB11FIP1-204ENST00000522774 TRAF2Q12933 501 aa10.71□□□□□ -0.7
RAB11FIP1-204ENST00000522774 KIF19Q2TAC6 998 aa10.71□□□□□ -0.7
RAB11FIP1-204ENST00000522774 KANK2Q63ZY3 851 aa10.71□□□□□ -0.7
RAB11FIP1-204ENST00000522774 C8orf82Q6P1X6 216 aaPredicted RBP10.71□□□□□ -0.7
RAB11FIP1-204ENST00000522774 DDIASQ8IXT1 998 aa10.71□□□□□ -0.7
RAB11FIP1-204ENST00000522774 PLD4Q96BZ4 506 aa10.71□□□□□ -0.7
RAB11FIP1-204ENST00000522774 CLSTN3Q9BQT9 956 aa10.71□□□□□ -0.7
RAB11FIP1-204ENST00000522774 MUC3BQ9H195 1237 aa10.71□□□□□ -0.7
RAB11FIP1-204ENST00000522774 SEMA4BQ9NPR2 832 aaPredicted RBP10.71□□□□□ -0.7
RAB11FIP1-204ENST00000522774 SMPD4Q9NXE4 827 aa10.71□□□□□ -0.7
RAB11FIP1-204ENST00000522774 PCDHGB4Q9UN71 923 aa10.71□□□□□ -0.7
RAB11FIP1-204ENST00000522774 PCDHGB5Q9Y5G0 923 aa10.71□□□□□ -0.7
RAB11FIP1-204ENST00000522774 AK5Q9Y6K8 562 aa10.71□□□□□ -0.7
RAB11FIP1-204ENST00000522774 A0A1B0GVM2 712 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 LCHNA4D1U4 455 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 C2orf81A6NN90 581 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 ENO4A6NNW6 628 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 LINC00032P0C843 101 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 PRDX3P30048 256 aaKnown RBP10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 MC4RP32245 332 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 TUFMP49411 452 aaKnown RBP10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 AGTR2P50052 363 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 ATP4BP51164 291 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 CLCQ05315 142 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 PLD1Q13393 1074 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 RARS2Q5T160 578 aaKnown RBP10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 ISLR2Q6UXK2 745 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 FBXO39Q8N4B4 442 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 TMEM102Q8N9M5 508 aaPredicted RBP10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 SIDT2Q8NBJ9 832 aaKnown RBP10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 PDZD8Q8NEN9 1154 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 STAG3L4Q8TBR4 150 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 FUBP1Q96AE4 644 aaKnown RBP10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 CCDC68Q9H2F9 335 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 SYTL2Q9HCH5 934 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 SPAG4Q9NPE6 437 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 CD300AQ9UGN4 299 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 NR5A2O00482 541 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 CLGNO14967 610 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 TMCC1O94876 653 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 EFEMP2O95967 443 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 BMP1P13497 986 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 LPOP22079 712 aaPredicted RBP10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 GRIA2P42262 883 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 CCL23P55773 120 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 STX1BP61266 288 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 RAD51Q06609 339 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 USP41Q3LFD5 358 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 CTSL3PQ5NE16 218 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 C6orf10Q5SRN2 563 aa10.7□□□□□ -0.7
RAB11FIP1-204ENST00000522774 ADGRF1Q5T601 910 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms