RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 EXD3Q8N9H8 876 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 FAM46DQ8NEK8 389 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 OR52K2Q8NGK3 314 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 ASB12Q8WXK4 309 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 ISG20Q96AZ6 181 aaKnown RBP6.28□□□□□ -1.4
PABPC1-220ENST00000522658 KREMEN1Q96MU8 473 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 WDR92Q96MX6 357 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 KLHL32Q96NJ5 620 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 CATSPER2Q96P56 530 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 TBCBQ99426 244 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 CRACR2AQ9BSW2 395 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 TCEAL2Q9H3H9 227 aaPredicted RBP6.28□□□□□ -1.4
PABPC1-220ENST00000522658 DPEP2Q9H4A9 486 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 SUDS3Q9H7L9 328 aaPredicted RBP6.28□□□□□ -1.4
PABPC1-220ENST00000522658 GPR27Q9NS67 375 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 APEX2Q9UBZ4 518 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 DUSP13Q9UII6 198 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 OR51B4Q9Y5P0 310 aa6.28□□□□□ -1.4
PABPC1-220ENST00000522658 TDRD6O60522 2096 aaKnown RBP6.27□□□□□ -1.41
PABPC1-220ENST00000522658 MYOCOSA0A1B0GUC4 107 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 PMS2P1A4D2B8 440 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 ANKRD62A6NC57 917 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 ZNF891A8MT65 544 aaPredicted RBP6.27□□□□□ -1.41
PABPC1-220ENST00000522658 NTN3O00634 580 aaPredicted RBP6.27□□□□□ -1.41
PABPC1-220ENST00000522658 SUV39H1O43463 412 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 BUB1O43683 1085 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 GCATO75600 419 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 ERBB2P04626 1255 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 CSTF2P33240 577 aaKnown RBP eCLIP6.27□□□□□ -1.41
PABPC1-220ENST00000522658 MTIF2P46199 727 aaKnown RBP6.27□□□□□ -1.41
PABPC1-220ENST00000522658 CXCR3P49682 368 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 SUOXP51687 545 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 PDX1P52945 283 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 STX17P56962 302 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 EGR3Q06889 387 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 KCNAB2Q13303 367 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 GRM3Q14832 879 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 TGIF1Q15583 401 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 TBR1Q16650 682 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 CDO1Q16878 200 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 SLC25A52Q3SY17 297 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 AMZ1Q400G9 498 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 C5orf22Q49AR2 442 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 TRIM65Q6PJ69 517 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 FAM131BQ86XD5 332 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 PTRH1Q86Y79 214 aaKnown RBP6.27□□□□□ -1.41
PABPC1-220ENST00000522658 IRF2BP1Q8IU81 584 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 TRIM59Q8IWR1 403 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 NRSN1Q8IZ57 195 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 ZNF397Q8NF99 534 aaPredicted RBP6.27□□□□□ -1.41
PABPC1-220ENST00000522658 ZNF564Q8TBZ8 553 aaPredicted RBP6.27□□□□□ -1.41
PABPC1-220ENST00000522658 CASKIN2Q8WXE0 1202 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 JPH3Q8WXH2 748 aaPredicted RBP6.27□□□□□ -1.41
PABPC1-220ENST00000522658 ARHGEF2Q92974 986 aaKnown RBP6.27□□□□□ -1.41
PABPC1-220ENST00000522658 USP7Q93009 1102 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 TSACCQ96A04 125 aaPredicted RBP6.27□□□□□ -1.41
PABPC1-220ENST00000522658 C18orf8Q96DM3 657 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 TBC1D31Q96DN5 1066 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 AHCYL2Q96HN2 611 aaKnown RBP6.27□□□□□ -1.41
PABPC1-220ENST00000522658 C1orf74Q96LT6 269 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 SEMA3CQ99985 751 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 EFHD1Q9BUP0 239 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 MAGEH1Q9H213 219 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 STN1Q9H668 368 aaKnown RBP6.27□□□□□ -1.41
PABPC1-220ENST00000522658 GPATCH2Q9NW75 528 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 GEMIN8Q9NWZ8 242 aaKnown RBP6.27□□□□□ -1.41
PABPC1-220ENST00000522658 DONSONQ9NYP3 566 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 ANAPC2Q9UJX6 822 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 ACSL6Q9UKU0 697 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 CORINQ9Y5Q5 1042 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 SNX10Q9Y5X0 201 aa6.27□□□□□ -1.41
PABPC1-220ENST00000522658 ATMQ13315 3056 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 CXorf51AA0A1B0GTR3 108 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 A0A1W2PNU3 283 aaPredicted RBP6.26□□□□□ -1.41
PABPC1-220ENST00000522658 GOLGA6CA6NDK9 693 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 GOLGA6BA6NDN3 693 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 DRGXA6NNA5 263 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 HGSO14964 777 aaPredicted RBP6.26□□□□□ -1.41
PABPC1-220ENST00000522658 TMCC1O94876 653 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 CPNE6O95741 557 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 ELFN1P0C7U0 828 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 GOLGA6DP0CG33 693 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 GP1BBP13224 206 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 ALDH4A1P30038 563 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 SDC4P31431 198 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 GKP32189 559 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 POLE2P56282 527 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 ARF5P84085 180 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 MC1RQ01726 317 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 ILF3Q12906 894 aaKnown RBP eCLIP6.26□□□□□ -1.41
PABPC1-220ENST00000522658 MTM1Q13496 603 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 MORC3Q14149 939 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 NCAPHQ15003 741 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 SYCP1Q15431 976 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 ALG11Q2TAA5 492 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 MYLK3Q32MK0 819 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 LINC00303Q3SY05 128 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 PTPN20Q4JDL3 420 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 C14orf28Q4W4Y0 310 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 TMEM201Q5SNT2 666 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms