RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 LARP4Q71RC2 724 aaKnown RBP eCLIP9.59□□□□□ -0.871e-6■■□□□ 13.8
CTNNA1-230ENST00000521724 LACC1Q8IV20 430 aa9.59□□□□□ -0.87
CTNNA1-230ENST00000521724 LYSMD2Q8IV50 215 aa9.59□□□□□ -0.87
CTNNA1-230ENST00000521724 CCDC103Q8IW40 242 aa9.59□□□□□ -0.87
CTNNA1-230ENST00000521724 LGI2Q8N0V4 545 aa9.59□□□□□ -0.87
CTNNA1-230ENST00000521724 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.59□□□□□ -0.87
CTNNA1-230ENST00000521724 SUN5Q8TC36 379 aa9.59□□□□□ -0.87
CTNNA1-230ENST00000521724 KHSRPQ92945 711 aaKnown RBP eCLIP9.59□□□□□ -0.872e-12■■■■□ 20.7
CTNNA1-230ENST00000521724 SDCCAG3Q96C92 435 aa9.59□□□□□ -0.87
CTNNA1-230ENST00000521724 PHF21BQ96EK2 531 aa9.59□□□□□ -0.87
CTNNA1-230ENST00000521724 CDK5RAP1Q96SZ6 601 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-230ENST00000521724 PCYT2Q99447 389 aa9.59□□□□□ -0.87
CTNNA1-230ENST00000521724 SH3GL1Q99961 368 aa9.59□□□□□ -0.87
CTNNA1-230ENST00000521724 KCTD14Q9BQ13 255 aaPredicted RBP9.59□□□□□ -0.87
CTNNA1-230ENST00000521724 EMILIN2Q9BXX0 1053 aa9.59□□□□□ -0.87
CTNNA1-230ENST00000521724 OR2B2Q9GZK3 357 aa9.59□□□□□ -0.87
CTNNA1-230ENST00000521724 NECTIN3Q9NQS3 549 aa9.59□□□□□ -0.87
CTNNA1-230ENST00000521724 ZNF638Q14966 1978 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 TCRBV5S2A0A599 114 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 SYCE1LA8MT33 242 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 SPATA31C2B4DYI2 1134 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 TNPO2O14787 897 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 AREL1O15033 823 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 HOXC11O43248 304 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 SCO2O43819 266 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 TBC1D4O60343 1298 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 B4GALT4O60513 344 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 DAB1O75553 588 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 UPK1BO75841 260 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 KCNK2O95069 426 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 PFKMP08237 780 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 MYL3P08590 195 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 ALDOCP09972 364 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 DPEP1P16444 411 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 ITIH1P19827 911 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 CAPN3P20807 821 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 CD68P34810 354 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 CASP3P42574 277 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 GSK3BP49841 420 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 NDST1P52848 882 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 FUT11Q495W5 492 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 RABL3Q5HYI8 236 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 TTC23Q5W5X9 447 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 LCLAT1Q6UWP7 414 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 RNF135Q8IUD6 432 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 C1orf127Q8N9H9 656 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 PAPD5Q8NDF8 572 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 CHDHQ8NE62 594 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 NSUN6Q8TEA1 469 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 HEXDCQ8WVB3 486 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 ELMO2Q96JJ3 720 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 ASPSCR1Q9BZE9 553 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 DSN1Q9H410 356 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 TOR3AQ9H497 397 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 MYOZ2Q9NPC6 264 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 MAGED1Q9Y5V3 778 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 PMF1-BGLAPU3KQ54 211 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 FAM95CA0A1B0GW59 222 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 GOLGA8CPA6NN73 597 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 TBKBP1A7MCY6 615 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 TBX1O43435 398 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 HUS1O60921 280 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 IPO13O94829 963 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 ALPLP05186 524 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 GJB1P08034 283 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 AGXTP21549 392 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 DNAJB1P25685 340 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 EIF2DP41214 584 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 ATP4BP51164 291 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 KPNA2P52292 529 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 HMGCS2P54868 508 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 GABARAPL2P60520 117 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 MRPS15P82914 257 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 FPGSQ05932 587 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 CTBP1Q13363 440 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 DAG1Q14118 895 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 ELOAQ14241 798 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 GOLGA7BQ2TAP0 167 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 WDR45BQ5MNZ6 344 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 ASCC1Q8N9N2 400 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 DNERQ8NFT8 737 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 BEST2Q8NFU1 509 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 PHF10Q8WUB8 498 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 MUC13Q9H3R2 512 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 LTB4R2Q9NPC1 389 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 CASS4Q9NQ75 786 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 ZNF302Q9NR11 478 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 ANGPTL3Q9Y5C1 460 aa9.58□□□□□ -0.88
CTNNA1-230ENST00000521724 TTC34A8MYJ7 566 aa9.57□□□□□ -0.88
CTNNA1-230ENST00000521724 CHRNA1P02708 482 aa9.57□□□□□ -0.88
CTNNA1-230ENST00000521724 CXCL8P10145 99 aa9.57□□□□□ -0.88
CTNNA1-230ENST00000521724 PRKCAP17252 672 aa9.57□□□□□ -0.88
CTNNA1-230ENST00000521724 TSPAN8P19075 237 aa9.57□□□□□ -0.88
CTNNA1-230ENST00000521724 MAGP20916 626 aa9.57□□□□□ -0.88
CTNNA1-230ENST00000521724 KCNA5P22460 613 aa9.57□□□□□ -0.88
CTNNA1-230ENST00000521724 EFNA5P52803 228 aa9.57□□□□□ -0.88
CTNNA1-230ENST00000521724 IST1P53990 364 aa9.57□□□□□ -0.88
CTNNA1-230ENST00000521724 SLC12A2P55011 1212 aa9.57□□□□□ -0.88
CTNNA1-230ENST00000521724 CHRNEQ04844 493 aa9.57□□□□□ -0.88
CTNNA1-230ENST00000521724 CSHL1Q14406 222 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms