RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 B4GALNT1Q00973 533 aa15.74■□□□□ 0.11
CLN8-205ENST00000520991 ZFP36L1Q07352 338 aaKnown RBP15.74■□□□□ 0.11
CLN8-205ENST00000520991 PPIDQ08752 370 aaKnown RBP15.74■□□□□ 0.11
CLN8-205ENST00000520991 VAC14Q08AM6 782 aa15.74■□□□□ 0.11
CLN8-205ENST00000520991 AP1B1Q10567 949 aa15.74■□□□□ 0.11
CLN8-205ENST00000520991 NLRP8Q86W28 1048 aa15.74■□□□□ 0.11
CLN8-205ENST00000520991 GALNT13Q8IUC8 556 aa15.74■□□□□ 0.11
CLN8-205ENST00000520991 PLD5Q8N7P1 536 aa15.74■□□□□ 0.11
CLN8-205ENST00000520991 RNF214Q8ND24 703 aa15.74■□□□□ 0.11
CLN8-205ENST00000520991 LSM14AQ8ND56 463 aaKnown RBP15.74■□□□□ 0.11
CLN8-205ENST00000520991 EXD1Q8NHP7 514 aa15.74■□□□□ 0.11
CLN8-205ENST00000520991 CCHCR1Q8TD31 782 aa15.74■□□□□ 0.11
CLN8-205ENST00000520991 PATE1Q8WXA2 126 aa15.74■□□□□ 0.11
CLN8-205ENST00000520991 TMEM159Q96B96 161 aa15.74■□□□□ 0.11
CLN8-205ENST00000520991 AGAP2Q99490 1192 aa15.74■□□□□ 0.11
CLN8-205ENST00000520991 CMKLR1Q99788 373 aa15.74■□□□□ 0.11
CLN8-205ENST00000520991 ADGRE3Q9BY15 652 aa15.74■□□□□ 0.11
CLN8-205ENST00000520991 AKAP7Q9P0M2 348 aaPredicted RBP15.74■□□□□ 0.11
CLN8-205ENST00000520991 PCDHGA7Q9Y5G6 932 aa15.74■□□□□ 0.11
CLN8-205ENST00000520991 KALRNO60229 2985 aa15.74■□□□□ 0.11
CLN8-205ENST00000520991 CPNE6O95741 557 aa15.73■□□□□ 0.11
CLN8-205ENST00000520991 ZFXP17010 805 aaPredicted RBP15.73■□□□□ 0.11
CLN8-205ENST00000520991 IFI35P80217 286 aaPredicted RBP15.73■□□□□ 0.11
CLN8-205ENST00000520991 RHDQ02161 417 aa15.73■□□□□ 0.11
CLN8-205ENST00000520991 ZBTB17Q13105 803 aa15.73■□□□□ 0.11
CLN8-205ENST00000520991 CLN3Q13286 438 aa15.73■□□□□ 0.11
CLN8-205ENST00000520991 QPCTQ16769 361 aa15.73■□□□□ 0.11
CLN8-205ENST00000520991 TAF1BQ53T94 588 aaPredicted RBP15.73■□□□□ 0.11
CLN8-205ENST00000520991 ZNF438Q7Z4V0 828 aa15.73■□□□□ 0.11
CLN8-205ENST00000520991 PIM3Q86V86 326 aa15.73■□□□□ 0.11
CLN8-205ENST00000520991 C17orf82Q86X59 251 aaPredicted RBP15.73■□□□□ 0.11
CLN8-205ENST00000520991 VSIG1Q86XK7 387 aa15.73■□□□□ 0.11
CLN8-205ENST00000520991 RFX6Q8HWS3 928 aa15.73■□□□□ 0.11
CLN8-205ENST00000520991 RAVER1Q8IY67 606 aaKnown RBP15.73■□□□□ 0.11
CLN8-205ENST00000520991 SCARF2Q96GP6 870 aaPredicted RBP15.73■□□□□ 0.11
CLN8-205ENST00000520991 LYSMD1Q96S90 227 aa15.73■□□□□ 0.11
CLN8-205ENST00000520991 MLPHQ9BV36 600 aaPredicted RBP15.73■□□□□ 0.11
CLN8-205ENST00000520991 RDH14Q9HBH5 336 aa15.73■□□□□ 0.11
CLN8-205ENST00000520991 PKD2L2Q9NZM6 624 aa15.73■□□□□ 0.11
CLN8-205ENST00000520991 SEPT10Q9P0V9 454 aa15.73■□□□□ 0.11
CLN8-205ENST00000520991 PLEKHM1Q9Y4G2 1056 aa15.73■□□□□ 0.11
CLN8-205ENST00000520991 ST14Q9Y5Y6 855 aa15.73■□□□□ 0.11
CLN8-205ENST00000520991 ATMQ13315 3056 aa15.73■□□□□ 0.11
CLN8-205ENST00000520991 ANKRD66B4E2M5 251 aa15.72■□□□□ 0.11
CLN8-205ENST00000520991 ERVH48-1M5A8F1 160 aa15.72■□□□□ 0.11
CLN8-205ENST00000520991 PPP1R12AO14974 1030 aaPredicted RBP15.72■□□□□ 0.11
CLN8-205ENST00000520991 B4GAT1O43505 415 aa15.72■□□□□ 0.11
CLN8-205ENST00000520991 MTA2O94776 668 aa15.72■□□□□ 0.11
CLN8-205ENST00000520991 MMP2P08253 660 aa15.72■□□□□ 0.11
CLN8-205ENST00000520991 TNNT1P13805 278 aa15.72■□□□□ 0.11
CLN8-205ENST00000520991 ITIH1P19827 911 aa15.72■□□□□ 0.11
CLN8-205ENST00000520991 GPR3P46089 330 aa15.72■□□□□ 0.11
CLN8-205ENST00000520991 C19orf57Q0VDD7 668 aa15.72■□□□□ 0.11
CLN8-205ENST00000520991 LRP8Q14114 963 aa15.72■□□□□ 0.11
CLN8-205ENST00000520991 PDK1Q15118 436 aa15.72■□□□□ 0.11
CLN8-205ENST00000520991 PYCR3Q53H96 274 aa15.72■□□□□ 0.11
CLN8-205ENST00000520991 SLC9A4Q6AI14 798 aa15.72■□□□□ 0.11
CLN8-205ENST00000520991 USP53Q70EK8 1073 aa15.72■□□□□ 0.11
CLN8-205ENST00000520991 TMPRSS9Q7Z410 1059 aa15.72■□□□□ 0.11
CLN8-205ENST00000520991 CNGA4Q8IV77 575 aa15.72■□□□□ 0.11
CLN8-205ENST00000520991 SLITRK4Q8IW52 837 aa15.72■□□□□ 0.11
CLN8-205ENST00000520991 NAGSQ8N159 534 aa15.72■□□□□ 0.11
CLN8-205ENST00000520991 CNTD1Q8N815 330 aa15.72■□□□□ 0.11
CLN8-205ENST00000520991 COX14Q96I36 57 aa15.72■□□□□ 0.11
CLN8-205ENST00000520991 CEP41Q9BYV8 373 aa15.72■□□□□ 0.11
CLN8-205ENST00000520991 ZMYND15Q9H091 742 aa15.72■□□□□ 0.11
CLN8-205ENST00000520991 SEMA6CQ9H3T2 930 aa15.72■□□□□ 0.11
CLN8-205ENST00000520991 ZNHIT2Q9UHR6 403 aa15.72■□□□□ 0.11
CLN8-205ENST00000520991 ARHGEF17Q96PE2 2063 aaPredicted RBP15.72■□□□□ 0.11
CLN8-205ENST00000520991 UNC13CQ8NB66 2214 aa15.72■□□□□ 0.11
CLN8-205ENST00000520991 FASNP49327 2511 aaKnown RBP15.72■□□□□ 0.11
CLN8-205ENST00000520991 C3orf70A6NLC5 250 aaPredicted RBP15.71■□□□□ 0.11
CLN8-205ENST00000520991 SPOPO43791 374 aa15.71■□□□□ 0.11
CLN8-205ENST00000520991 SLC1A1P43005 524 aa15.71■□□□□ 0.11
CLN8-205ENST00000520991 SPINT3P49223 89 aa15.71■□□□□ 0.11
CLN8-205ENST00000520991 PPM1FP49593 454 aaPredicted RBP15.71■□□□□ 0.11
CLN8-205ENST00000520991 MAPK10P53779 464 aa15.71■□□□□ 0.11
CLN8-205ENST00000520991 DYNLT1P63172 113 aa15.71■□□□□ 0.11
CLN8-205ENST00000520991 GALNT3Q14435 633 aa15.71■□□□□ 0.11
CLN8-205ENST00000520991 NR1D2Q14995 579 aa15.71■□□□□ 0.11
CLN8-205ENST00000520991 CLPPQ16740 277 aaPredicted RBP15.71■□□□□ 0.11
CLN8-205ENST00000520991 LRRC38Q5VT99 294 aa15.71■□□□□ 0.11
CLN8-205ENST00000520991 NPNTQ6UXI9 565 aa15.71■□□□□ 0.11
CLN8-205ENST00000520991 CCDC81Q6ZN84 652 aa15.71■□□□□ 0.11
CLN8-205ENST00000520991 RHOT1Q8IXI2 618 aa15.71■□□□□ 0.11
CLN8-205ENST00000520991 RNF25Q96BH1 459 aaPredicted RBP15.71■□□□□ 0.11
CLN8-205ENST00000520991 AGAP3Q96P47 875 aa15.71■□□□□ 0.11
CLN8-205ENST00000520991 NUDT22Q9BRQ3 303 aa15.71■□□□□ 0.11
CLN8-205ENST00000520991 FAM83DQ9H4H8 585 aa15.71■□□□□ 0.11
CLN8-205ENST00000520991 DDX56Q9NY93 547 aaKnown RBP15.71■□□□□ 0.11
CLN8-205ENST00000520991 SSUH2Q9Y2M2 353 aa15.71■□□□□ 0.11
CLN8-205ENST00000520991 RGSL1A5PLK6 1076 aa15.7■□□□□ 0.1
CLN8-205ENST00000520991 AKR1B15C9JRZ8 316 aaPredicted RBP15.7■□□□□ 0.1
CLN8-205ENST00000520991 K7ENP7 123 aa15.7■□□□□ 0.1
CLN8-205ENST00000520991 PPM1DO15297 605 aa15.7■□□□□ 0.1
CLN8-205ENST00000520991 NVLO15381 856 aaKnown RBP15.7■□□□□ 0.1
CLN8-205ENST00000520991 SLC4A1P02730 911 aa15.7■□□□□ 0.1
CLN8-205ENST00000520991 ATP1A1P05023 1023 aaKnown RBP15.7■□□□□ 0.1
CLN8-205ENST00000520991 HENMT1Q5T8I9 393 aaKnown RBP15.7■□□□□ 0.1
CLN8-205ENST00000520991 INO80CQ6PI98 192 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms