RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 AKR1B15C9JRZ8 316 aaPredicted RBP16.05■□□□□ 0.16
IGHV3-42-201ENST00000520410 ATXN7O15265 892 aaPredicted RBP16.05■□□□□ 0.16
IGHV3-42-201ENST00000520410 ATP1A1P05023 1023 aaKnown RBP16.05■□□□□ 0.16
IGHV3-42-201ENST00000520410 IVLP07476 585 aa16.05■□□□□ 0.16
IGHV3-42-201ENST00000520410 PNLIPP16233 465 aa16.05■□□□□ 0.16
IGHV3-42-201ENST00000520410 CCKBRP32239 447 aa16.05■□□□□ 0.16
IGHV3-42-201ENST00000520410 ARHGAP25P42331 645 aa16.05■□□□□ 0.16
IGHV3-42-201ENST00000520410 MLLT3P42568 568 aaPredicted RBP16.05■□□□□ 0.16
IGHV3-42-201ENST00000520410 TNNT3P45378 269 aaPredicted RBP16.05■□□□□ 0.16
IGHV3-42-201ENST00000520410 VAC14Q08AM6 782 aa16.05■□□□□ 0.16
IGHV3-42-201ENST00000520410 C19orf57Q0VDD7 668 aa16.05■□□□□ 0.16
IGHV3-42-201ENST00000520410 ZBTB17Q13105 803 aa16.05■□□□□ 0.16
IGHV3-42-201ENST00000520410 LLGL1Q15334 1064 aa16.05■□□□□ 0.16
IGHV3-42-201ENST00000520410 KAZNQ674X7 775 aa16.05■□□□□ 0.16
IGHV3-42-201ENST00000520410 CCDC70Q6NSX1 233 aa16.05■□□□□ 0.16
IGHV3-42-201ENST00000520410 IGF2-ASQ6U949 168 aa16.05■□□□□ 0.16
IGHV3-42-201ENST00000520410 ADAMTSL4Q6UY14 1074 aa16.05■□□□□ 0.16
IGHV3-42-201ENST00000520410 ZNF765Q7L2R6 523 aa16.05■□□□□ 0.16
IGHV3-42-201ENST00000520410 NRSN1Q8IZ57 195 aa16.05■□□□□ 0.16
IGHV3-42-201ENST00000520410 ARRDC2Q8TBH0 407 aa16.05■□□□□ 0.16
IGHV3-42-201ENST00000520410 FAF2Q96CS3 445 aa16.05■□□□□ 0.16
IGHV3-42-201ENST00000520410 STN1Q9H668 368 aaKnown RBP16.05■□□□□ 0.16
IGHV3-42-201ENST00000520410 KCNK4Q9NYG8 393 aa16.05■□□□□ 0.16
IGHV3-42-201ENST00000520410 PPIL1Q9Y3C6 166 aa16.05■□□□□ 0.16
IGHV3-42-201ENST00000520410 COL27A1Q8IZC6 1860 aaPredicted RBP16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 SNX2O60749 519 aa16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 CPNE6O95741 557 aa16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 FUCA1P04066 466 aa16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 PIRTP0C851 137 aa16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 ZFXP17010 805 aaPredicted RBP16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 TEAD1P28347 426 aa16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 MAPK9P45984 424 aa16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 RPL26P61254 145 aaKnown RBP16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 PPIDQ08752 370 aaKnown RBP16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 PDK1Q15118 436 aa16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 QPCTQ16769 361 aa16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 ASTE1Q2TB18 679 aaPredicted RBP16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 NKAIN2Q5VXU1 208 aa16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 ALG1LQ6GMV1 187 aa16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 CLEC14AQ86T13 490 aa16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 ZNF761Q86XN6 746 aaPredicted RBP16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 CCDC50Q8IVM0 306 aa16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 RHOT1Q8IXI2 618 aa16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 PLD5Q8N7P1 536 aa16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 RCBTB1Q8NDN9 531 aa16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 SPATA16Q9BXB7 569 aa16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 SEMA6CQ9H3T2 930 aa16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 FAM83DQ9H4H8 585 aa16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 ARFGAP3Q9NP61 516 aa16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 DDX56Q9NY93 547 aaKnown RBP16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 RPL26L1Q9UNX3 145 aaKnown RBP16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 SHOC2Q9UQ13 582 aa16.04■□□□□ 0.16
IGHV3-42-201ENST00000520410 SOD1P00441 154 aa16.03■□□□□ 0.16
IGHV3-42-201ENST00000520410 ACP5P13686 325 aa16.03■□□□□ 0.16
IGHV3-42-201ENST00000520410 MPSTP25325 297 aa16.03■□□□□ 0.16
IGHV3-42-201ENST00000520410 SKOR1P84550 965 aa16.03■□□□□ 0.16
IGHV3-42-201ENST00000520410 B4GALNT1Q00973 533 aa16.03■□□□□ 0.16
IGHV3-42-201ENST00000520410 RHDQ02161 417 aa16.03■□□□□ 0.16
IGHV3-42-201ENST00000520410 CLN3Q13286 438 aa16.03■□□□□ 0.16
IGHV3-42-201ENST00000520410 ZNF569Q5MCW4 686 aa16.03■□□□□ 0.16
IGHV3-42-201ENST00000520410 SNAP47Q5SQN1 464 aa16.03■□□□□ 0.16
IGHV3-42-201ENST00000520410 TMEM164Q5U3C3 297 aa16.03■□□□□ 0.16
IGHV3-42-201ENST00000520410 KIAA1614Q5VZ46 1190 aa16.03■□□□□ 0.16
IGHV3-42-201ENST00000520410 LYSMD3Q7Z3D4 306 aa16.03■□□□□ 0.16
IGHV3-42-201ENST00000520410 NT5DC3Q86UY8 548 aa16.03■□□□□ 0.16
IGHV3-42-201ENST00000520410 NAGSQ8N159 534 aa16.03■□□□□ 0.16
IGHV3-42-201ENST00000520410 USP7Q93009 1102 aa16.03■□□□□ 0.16
IGHV3-42-201ENST00000520410 FATE1Q969F0 183 aa16.03■□□□□ 0.16
IGHV3-42-201ENST00000520410 CCDC74BQ96LY2 380 aa16.03■□□□□ 0.16
IGHV3-42-201ENST00000520410 SLC38A3Q99624 504 aa16.03■□□□□ 0.16
IGHV3-42-201ENST00000520410 NUDT22Q9BRQ3 303 aa16.03■□□□□ 0.16
IGHV3-42-201ENST00000520410 GPR63Q9BZJ6 419 aa16.03■□□□□ 0.16
IGHV3-42-201ENST00000520410 TRIM5Q9C035 493 aa16.03■□□□□ 0.16
IGHV3-42-201ENST00000520410 OSGEPL1Q9H4B0 414 aa16.03■□□□□ 0.16
IGHV3-42-201ENST00000520410 KCNK6Q9Y257 313 aa16.03■□□□□ 0.16
IGHV3-42-201ENST00000520410 PCDHB11Q9Y5F2 797 aa16.03■□□□□ 0.16
IGHV3-42-201ENST00000520410 DSPP15924 2871 aaKnown RBP16.02■□□□□ 0.16
IGHV3-42-201ENST00000520410 PRAMEF33A0A0G2JMD5 474 aa16.02■□□□□ 0.16
IGHV3-42-201ENST00000520410 ANKRD66B4E2M5 251 aa16.02■□□□□ 0.16
IGHV3-42-201ENST00000520410 F5H423 210 aaPredicted RBP16.02■□□□□ 0.16
IGHV3-42-201ENST00000520410 ERVH48-1M5A8F1 160 aa16.02■□□□□ 0.16
IGHV3-42-201ENST00000520410 B4GAT1O43505 415 aa16.02■□□□□ 0.16
IGHV3-42-201ENST00000520410 PRAMEF10O60809 474 aa16.02■□□□□ 0.16
IGHV3-42-201ENST00000520410 PRLP01236 227 aa16.02■□□□□ 0.16
IGHV3-42-201ENST00000520410 COMTP21964 271 aa16.02■□□□□ 0.16
IGHV3-42-201ENST00000520410 SLC1A1P43005 524 aa16.02■□□□□ 0.16
IGHV3-42-201ENST00000520410 SPINT3P49223 89 aa16.02■□□□□ 0.16
IGHV3-42-201ENST00000520410 IFI35P80217 286 aaPredicted RBP16.02■□□□□ 0.16
IGHV3-42-201ENST00000520410 IHHQ14623 411 aa16.02■□□□□ 0.16
IGHV3-42-201ENST00000520410 PLA2G4EQ3MJ16 856 aa16.02■□□□□ 0.16
IGHV3-42-201ENST00000520410 PYCR3Q53H96 274 aa16.02■□□□□ 0.16
IGHV3-42-201ENST00000520410 SLC9A4Q6AI14 798 aa16.02■□□□□ 0.16
IGHV3-42-201ENST00000520410 TMPRSS9Q7Z410 1059 aa16.02■□□□□ 0.16
IGHV3-42-201ENST00000520410 CBARPQ8N350 705 aaPredicted RBP16.02■□□□□ 0.16
IGHV3-42-201ENST00000520410 TMEM159Q96B96 161 aa16.02■□□□□ 0.16
IGHV3-42-201ENST00000520410 HAUS1Q96CS2 278 aa16.02■□□□□ 0.16
IGHV3-42-201ENST00000520410 CCNL2Q96S94 520 aaPredicted RBP16.02■□□□□ 0.16
IGHV3-42-201ENST00000520410 ZFYVE1Q9HBF4 777 aa16.02■□□□□ 0.16
IGHV3-42-201ENST00000520410 UBP1Q9NZI7 540 aa16.02■□□□□ 0.16
IGHV3-42-201ENST00000520410 KNTC1P50748 2209 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms