RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 CHRM1P11229 460 aaPredicted RBP12.33□□□□□ -0.44
SPIDR-209ENST00000519141 COL6A2P12110 1019 aa12.33□□□□□ -0.44
SPIDR-209ENST00000519141 TIMP2P16035 220 aa12.33□□□□□ -0.44
SPIDR-209ENST00000519141 TAC1P20366 129 aa12.33□□□□□ -0.44
SPIDR-209ENST00000519141 ITGB7P26010 798 aa12.33□□□□□ -0.44
SPIDR-209ENST00000519141 GMPRP36959 345 aa12.33□□□□□ -0.44
SPIDR-209ENST00000519141 PPARGP37231 505 aaPredicted RBP12.33□□□□□ -0.44
SPIDR-209ENST00000519141 CDKN1CP49918 316 aaPredicted RBP12.33□□□□□ -0.44
SPIDR-209ENST00000519141 PTPN5P54829 565 aa12.33□□□□□ -0.44
SPIDR-209ENST00000519141 ZNF460Q14592 562 aa12.33□□□□□ -0.44
SPIDR-209ENST00000519141 POM121L1PQ3SYA9 428 aa12.33□□□□□ -0.44
SPIDR-209ENST00000519141 CCDC153Q494R4 210 aa12.33□□□□□ -0.44
SPIDR-209ENST00000519141 ZDHHC20Q5W0Z9 365 aa12.33□□□□□ -0.44
SPIDR-209ENST00000519141 C16orf46Q6P387 395 aa12.33□□□□□ -0.44
SPIDR-209ENST00000519141 CERS6Q6ZMG9 384 aa12.33□□□□□ -0.44
SPIDR-209ENST00000519141 PARS2Q7L3T8 475 aaKnown RBP12.33□□□□□ -0.44
SPIDR-209ENST00000519141 SNX20Q7Z614 316 aa12.33□□□□□ -0.44
SPIDR-209ENST00000519141 CCDC91Q7Z6B0 441 aa12.33□□□□□ -0.44
SPIDR-209ENST00000519141 TTC7BQ86TV6 843 aa12.33□□□□□ -0.44
SPIDR-209ENST00000519141 TMIEQ8NEW7 156 aa12.33□□□□□ -0.44
SPIDR-209ENST00000519141 PPP1R16AQ96I34 528 aa12.33□□□□□ -0.44
SPIDR-209ENST00000519141 TTC1Q99614 292 aa12.33□□□□□ -0.44
SPIDR-209ENST00000519141 OLFM1Q99784 485 aa12.33□□□□□ -0.44
SPIDR-209ENST00000519141 PCDH12Q9NPG4 1184 aa12.33□□□□□ -0.44
SPIDR-209ENST00000519141 PKD2L2Q9NZM6 624 aa12.33□□□□□ -0.44
SPIDR-209ENST00000519141 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.33□□□□□ -0.44
SPIDR-209ENST00000519141 SUN2Q9UH99 717 aa12.33□□□□□ -0.44
SPIDR-209ENST00000519141 EMCNQ9ULC0 261 aa12.33□□□□□ -0.44
SPIDR-209ENST00000519141 VWA7Q9Y334 891 aa12.33□□□□□ -0.44
SPIDR-209ENST00000519141 GAPDHSO14556 408 aaPredicted RBP12.32□□□□□ -0.44
SPIDR-209ENST00000519141 NPC1O15118 1278 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 BIRC5O15392 142 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 MBTPS2O43462 519 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 PROCP04070 461 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 APOA4P06727 396 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 C1SP09871 688 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 DRD4P21917 467 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 GALK1P51570 392 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 KPNA2P52292 529 aaKnown RBP12.32□□□□□ -0.44
SPIDR-209ENST00000519141 CDKN2DP55273 166 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 IRX4P78413 519 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 DBN1Q16643 649 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 TSNAXIP1Q2TAA8 658 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 ERAP2Q6P179 960 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 ZNF549Q6P9A3 640 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 DPPA4Q7L190 304 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 TBC1D1Q86TI0 1168 aaPredicted RBP12.32□□□□□ -0.44
SPIDR-209ENST00000519141 TRIM42Q8IWZ5 723 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 PLD6Q8N2A8 252 aaKnown RBP12.32□□□□□ -0.44
SPIDR-209ENST00000519141 PIP4K2CQ8TBX8 421 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 ZNF473Q8WTR7 871 aaKnown RBP12.32□□□□□ -0.44
SPIDR-209ENST00000519141 KCTD4Q8WVF5 259 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 ZNF75CPQ92670 426 aaPredicted RBP12.32□□□□□ -0.44
SPIDR-209ENST00000519141 PLEKHG4BQ96PX9 1271 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 AARSD1Q9BTE6 412 aaKnown RBP12.32□□□□□ -0.44
SPIDR-209ENST00000519141 ASB8Q9H765 288 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 GPAMQ9HCL2 828 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 IL26Q9NPH9 171 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 FGFR1OP2Q9NVK5 253 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 ZNF358Q9NW07 568 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 CACNA2D2Q9NY47 1150 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 TMEM216Q9P0N5 145 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 MID2Q9UJV3 735 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 PPM1HQ9ULR3 514 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 STARD13Q9Y3M8 1113 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 CKAP5Q14008 2032 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 C1QTNF3-AMACRE9PGA6 284 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 SPECC1L-ADORA2AF8WAN1 911 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 GPR39O43194 453 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 BPGMP07738 259 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 HNRNPLP14866 589 aaKnown RBP eCLIP12.32□□□□□ -0.44
SPIDR-209ENST00000519141 FDXRP22570 491 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 CTHP32929 405 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 MMP12P39900 470 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 PTGER3P43115 390 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 TNFRSF4P43489 277 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 PGGT1BP53609 377 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 PTSQ03393 145 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 NFATC2Q13469 925 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 SMAD2Q15796 467 aaKnown RBP12.32□□□□□ -0.44
SPIDR-209ENST00000519141 GPR33Q49SQ1 333 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 LYPLAL1Q5VWZ2 237 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 NUDCD3Q8IVD9 361 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 CHPFQ8IZ52 775 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 CENPLQ8N0S6 344 aaPredicted RBP12.32□□□□□ -0.44
SPIDR-209ENST00000519141 GJD3Q8N144 294 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 PLCD3Q8N3E9 789 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 ZNF513Q8N8E2 541 aaPredicted RBP12.32□□□□□ -0.44
SPIDR-209ENST00000519141 FAM129BQ96TA1 746 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 ACOX2Q99424 681 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 MECRQ9BV79 373 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 C1QTNF1Q9BXJ1 281 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 MANSC1Q9H8J5 431 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 NMRAL1Q9HBL8 299 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 POPDC3Q9HBV1 291 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 FBRSL1Q9HCM7 1045 aaKnown RBP12.32□□□□□ -0.44
SPIDR-209ENST00000519141 ZDHHC4Q9NPG8 344 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 PRSS16Q9NQE7 514 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 DYRK4Q9NR20 520 aa12.32□□□□□ -0.44
SPIDR-209ENST00000519141 RAD18Q9NS91 495 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms