RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 CLDN14O95500 239 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 ACTN1P12814 892 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 TKTP29401 623 aaKnown RBP3.67□□□□□ -1.82
VPS13B-207ENST00000518569 BDKRB2P30411 391 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 CLCN3P51790 818 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 DRG2P55039 364 aaKnown RBP3.67□□□□□ -1.82
VPS13B-207ENST00000518569 TAS2R40P59535 323 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 FOXM1Q08050 763 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 DDR1Q08345 913 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 LRMPQ12912 555 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 TNFAIP1Q13829 316 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 DECR1Q16698 335 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 LCE1AQ5T7P2 110 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 GKAP1Q5VSY0 366 aaPredicted RBP3.67□□□□□ -1.82
VPS13B-207ENST00000518569 SPATA1Q5VX52 437 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 ZNF324BQ6AW86 544 aaPredicted RBP3.67□□□□□ -1.82
VPS13B-207ENST00000518569 WDR73Q6P4I2 378 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 CCNI2Q6ZMN8 369 aaPredicted RBP3.67□□□□□ -1.82
VPS13B-207ENST00000518569 TTC39CQ8N584 583 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 RND1Q92730 232 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 TANKQ92844 425 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 TAAR8Q969N4 342 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 BICD1Q96G01 975 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 DUX5Q96PT3 197 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 C6orf106Q9H6K1 298 aaPredicted RBP3.67□□□□□ -1.82
VPS13B-207ENST00000518569 GAREM1Q9H706 876 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 SLC28A3Q9HAS3 691 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 NOX4Q9NPH5 578 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 ZNF224Q9NZL3 707 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 OR14J1Q9UGF5 321 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 SIX4Q9UIU6 781 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 FBXW11Q9UKB1 542 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 SESN1Q9Y6P5 492 aa3.67□□□□□ -1.82
VPS13B-207ENST00000518569 ARHGEF40Q8TER5 1519 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 KANSL1LA0AUZ9 987 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 C1orf226A1L170 272 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 MAGEA13PA6NCF6 341 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 PTGES3LE9PB15 166 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 M0QZ24 198 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 AP3D1O14617 1153 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 MID1O15344 667 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 PAPSS2O95340 614 aaPredicted RBP3.66□□□□□ -1.82
VPS13B-207ENST00000518569 PPP1R3DO95685 299 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 PMS2P2O95744 297 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 EGFP01133 1207 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 HIST1H2ABP04908 130 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 LINC00271P0C7V0 271 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 FGF3P11487 239 aaPredicted RBP3.66□□□□□ -1.82
VPS13B-207ENST00000518569 ALOX12P18054 663 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 HIST1H2ADP20671 130 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 CALRP27797 417 aaKnown RBP3.66□□□□□ -1.82
VPS13B-207ENST00000518569 CCKBRP32239 447 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 PIK3CAP42336 1068 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 PDLIM4P50479 330 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 GALCP54803 685 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 CDH8P55286 799 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 ACSM2AQ08AH3 577 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 LMOD3Q0VAK6 560 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 GRSF1Q12849 480 aaKnown RBP eCLIP3.66□□□□□ -1.82
VPS13B-207ENST00000518569 MAD2L1Q13257 205 aaPredicted RBP3.66□□□□□ -1.82
VPS13B-207ENST00000518569 ASIC2Q16515 512 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 PNLIPRP3Q17RR3 467 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 ZSCAN23Q3MJ62 389 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 PAPPA-AS1Q5QFB9 102 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 FAM205BPQ63HN1 556 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 ACSM2BQ68CK6 577 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 ITPRIPL1Q6GPH6 555 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 DUS1LQ6P1R4 473 aaKnown RBP3.66□□□□□ -1.82
VPS13B-207ENST00000518569 BRAT1Q6PJG6 821 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 BRINP3Q76B58 766 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 CHST9Q7L1S5 443 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 HIST3H2AQ7L7L0 130 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 C16orf82Q7Z2V1 217 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 TEX11Q8IYF3 940 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 BEST3Q8N1M1 668 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 PCDH20Q8N6Y1 951 aaKnown RBP3.66□□□□□ -1.82
VPS13B-207ENST00000518569 RBMXL3Q8N7X1 1067 aaKnown RBP3.66□□□□□ -1.82
VPS13B-207ENST00000518569 LILRB1Q8NHL6 650 aaPredicted RBP3.66□□□□□ -1.82
VPS13B-207ENST00000518569 THAP6Q8TBB0 222 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 TRPC4APQ8TEL6 797 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 APBB2Q92870 758 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 NSUN4Q96CB9 384 aaKnown RBP3.66□□□□□ -1.82
VPS13B-207ENST00000518569 ORAI1Q96D31 301 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 ADGRG7Q96K78 797 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 C3orf30Q96M34 536 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 OR2A14Q96R47 310 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 CSF3RQ99062 836 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 C1QTNF1Q9BXJ1 281 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 GHITMQ9H3K2 345 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 DDX31Q9H8H2 851 aaKnown RBP3.66□□□□□ -1.82
VPS13B-207ENST00000518569 LOXL2Q9Y4K0 774 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 CLIC4Q9Y696 253 aa3.66□□□□□ -1.82
VPS13B-207ENST00000518569 A6NCN8 305 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 VILLO15195 856 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 KCNN4O15554 427 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 HS6ST1O60243 411 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 DDNO94850 711 aaPredicted RBP3.65□□□□□ -1.83
VPS13B-207ENST00000518569 KDM4BO94953 1096 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 ZBTB11O95625 1053 aaPredicted RBP3.65□□□□□ -1.83
VPS13B-207ENST00000518569 SRPRAP08240 638 aaKnown RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms