RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 MARK2Q7KZI7 788 aaKnown RBP18.57■□□□□ 0.56
FAM49B-208ENST00000518344 EFL1Q7Z2Z2 1120 aaKnown RBP18.57■□□□□ 0.56
FAM49B-208ENST00000518344 TMPRSS12Q86WS5 348 aa18.57■□□□□ 0.56
FAM49B-208ENST00000518344 SLC35F3Q8IY50 421 aa18.57■□□□□ 0.56
FAM49B-208ENST00000518344 SDR16C5Q8N3Y7 309 aa18.57■□□□□ 0.56
FAM49B-208ENST00000518344 FAM46DQ8NEK8 389 aa18.57■□□□□ 0.56
FAM49B-208ENST00000518344 CCL4L1Q8NHW4 92 aa18.57■□□□□ 0.56
FAM49B-208ENST00000518344 UBE2Q2Q8WVN8 375 aa18.57■□□□□ 0.56
FAM49B-208ENST00000518344 GATA6Q92908 595 aa18.57■□□□□ 0.56
FAM49B-208ENST00000518344 SRPK1Q96SB4 655 aaKnown RBP18.57■□□□□ 0.56
FAM49B-208ENST00000518344 FSD1LQ9BXM9 530 aa18.57■□□□□ 0.56
FAM49B-208ENST00000518344 R3HDM2Q9Y2K5 976 aaKnown RBP18.57■□□□□ 0.56
FAM49B-208ENST00000518344 PPP2R2CQ9Y2T4 447 aa18.57■□□□□ 0.56
FAM49B-208ENST00000518344 ANXA9O76027 345 aa18.56■□□□□ 0.56
FAM49B-208ENST00000518344 AGTP01019 485 aa18.56■□□□□ 0.56
FAM49B-208ENST00000518344 PSMB4P28070 264 aa18.56■□□□□ 0.56
FAM49B-208ENST00000518344 SLC1A5Q15758 541 aa18.56■□□□□ 0.56
FAM49B-208ENST00000518344 HENMT1Q5T8I9 393 aaKnown RBP18.56■□□□□ 0.56
FAM49B-208ENST00000518344 FAM71DQ8N9W8 422 aa18.56■□□□□ 0.56
FAM49B-208ENST00000518344 GPR26Q8NDV2 337 aa18.56■□□□□ 0.56
FAM49B-208ENST00000518344 PTCD2Q8WV60 388 aaKnown RBP18.56■□□□□ 0.56
FAM49B-208ENST00000518344 SPATA13Q96N96 652 aa18.56■□□□□ 0.56
FAM49B-208ENST00000518344 FICDQ9BVA6 458 aa18.56■□□□□ 0.56
FAM49B-208ENST00000518344 SPATA16Q9BXB7 569 aa18.56■□□□□ 0.56
FAM49B-208ENST00000518344 ABCG4Q9H172 646 aa18.56■□□□□ 0.56
FAM49B-208ENST00000518344 BPIFA1Q9NP55 256 aa18.56■□□□□ 0.56
FAM49B-208ENST00000518344 RAD18Q9NS91 495 aa18.56■□□□□ 0.56
FAM49B-208ENST00000518344 SLC17A4Q9Y2C5 497 aa18.56■□□□□ 0.56
FAM49B-208ENST00000518344 AAR2Q9Y312 384 aaKnown RBP18.56■□□□□ 0.56
FAM49B-208ENST00000518344 GPSM3Q9Y4H4 160 aa18.56■□□□□ 0.56
FAM49B-208ENST00000518344 TDRD6O60522 2096 aaKnown RBP18.56■□□□□ 0.56
FAM49B-208ENST00000518344 FADS2P1A8MWK0 482 aa18.55■□□□□ 0.56
FAM49B-208ENST00000518344 ZNF189O75820 626 aaPredicted RBP18.55■□□□□ 0.56
FAM49B-208ENST00000518344 HLA-DPA1P20036 260 aa18.55■□□□□ 0.56
FAM49B-208ENST00000518344 INSM1Q01101 510 aaPredicted RBP18.55■□□□□ 0.56
FAM49B-208ENST00000518344 ARHGEF18Q6ZSZ5 1173 aa18.55■□□□□ 0.56
FAM49B-208ENST00000518344 ARL10Q8N8L6 244 aa18.55■□□□□ 0.56
FAM49B-208ENST00000518344 KYQ8NBH2 561 aa18.55■□□□□ 0.56
FAM49B-208ENST00000518344 BLOC1S5Q8TDH9 187 aa18.55■□□□□ 0.56
FAM49B-208ENST00000518344 COX14Q96I36 57 aa18.55■□□□□ 0.56
FAM49B-208ENST00000518344 GORASP1Q9BQQ3 440 aa18.55■□□□□ 0.56
FAM49B-208ENST00000518344 DPEP2Q9H4A9 486 aa18.55■□□□□ 0.56
FAM49B-208ENST00000518344 TRABDQ9H4I3 376 aa18.55■□□□□ 0.56
FAM49B-208ENST00000518344 CNOT6Q9ULM6 557 aaKnown RBP18.55■□□□□ 0.56
FAM49B-208ENST00000518344 PADI4Q9UM07 663 aa18.55■□□□□ 0.56
FAM49B-208ENST00000518344 SPEGQ15772 3267 aa18.55■□□□□ 0.56
FAM49B-208ENST00000518344 EME2A4GXA9 379 aaPredicted RBP18.54■□□□□ 0.56
FAM49B-208ENST00000518344 C5orf60A6NFR6 353 aa18.54■□□□□ 0.56
FAM49B-208ENST00000518344 B4DGG1 531 aa18.54■□□□□ 0.56
FAM49B-208ENST00000518344 OPA1O60313 960 aa18.54■□□□□ 0.56
FAM49B-208ENST00000518344 ATP1A1P05023 1023 aaKnown RBP18.54■□□□□ 0.56
FAM49B-208ENST00000518344 FGF1P05230 155 aa18.54■□□□□ 0.56
FAM49B-208ENST00000518344 GP1BAP07359 652 aa18.54■□□□□ 0.56
FAM49B-208ENST00000518344 IVLP07476 585 aa18.54■□□□□ 0.56
FAM49B-208ENST00000518344 BPIP17213 487 aa18.54■□□□□ 0.56
FAM49B-208ENST00000518344 ADCY8P40145 1251 aa18.54■□□□□ 0.56
FAM49B-208ENST00000518344 ILF3Q12906 894 aaKnown RBP eCLIP18.54■□□□□ 0.56
FAM49B-208ENST00000518344 TARDBPQ13148 414 aaKnown RBP eCLIP18.54■□□□□ 0.562e-7■■■■□ 25.7
FAM49B-208ENST00000518344 OLIG2Q13516 323 aa18.54■□□□□ 0.56
FAM49B-208ENST00000518344 SLC13A5Q86YT5 568 aaPredicted RBP18.54■□□□□ 0.56
FAM49B-208ENST00000518344 TRIM58Q8NG06 486 aa18.54■□□□□ 0.56
FAM49B-208ENST00000518344 SLC35B2Q8TB61 432 aa18.54■□□□□ 0.56
FAM49B-208ENST00000518344 MAPK15Q8TD08 544 aa18.54■□□□□ 0.56
FAM49B-208ENST00000518344 ATG4AQ8WYN0 398 aa18.54■□□□□ 0.56
FAM49B-208ENST00000518344 APOL2Q9BQE5 337 aa18.54■□□□□ 0.56
FAM49B-208ENST00000518344 TMEM121Q9BTD3 319 aa18.54■□□□□ 0.56
FAM49B-208ENST00000518344 TMEM121BQ9BXQ6 578 aaPredicted RBP18.54■□□□□ 0.56
FAM49B-208ENST00000518344 GSDMCQ9BYG8 508 aa18.54■□□□□ 0.56
FAM49B-208ENST00000518344 TRNAU1APQ9NX07 287 aaKnown RBP18.54■□□□□ 0.56
FAM49B-208ENST00000518344 CLCA2Q9UQC9 943 aa18.54■□□□□ 0.56
FAM49B-208ENST00000518344 OAS3Q9Y6K5 1087 aaKnown RBP18.54■□□□□ 0.56
FAM49B-208ENST00000518344 MT-CO3P00414 261 aa18.53■□□□□ 0.56
FAM49B-208ENST00000518344 PROS1P07225 676 aa18.53■□□□□ 0.56
FAM49B-208ENST00000518344 AK4P27144 223 aaPredicted RBP18.53■□□□□ 0.56
FAM49B-208ENST00000518344 CTBSQ01459 385 aa18.53■□□□□ 0.56
FAM49B-208ENST00000518344 SPARCL1Q14515 664 aa18.53■□□□□ 0.56
FAM49B-208ENST00000518344 ZNF569Q5MCW4 686 aa18.53■□□□□ 0.56
FAM49B-208ENST00000518344 PERM1Q5SV97 790 aa18.53■□□□□ 0.56
FAM49B-208ENST00000518344 SLC30A9Q6PML9 568 aa18.53■□□□□ 0.56
FAM49B-208ENST00000518344 GLT6D1Q7Z4J2 308 aa18.53■□□□□ 0.56
FAM49B-208ENST00000518344 GALNT13Q8IUC8 556 aa18.53■□□□□ 0.56
FAM49B-208ENST00000518344 GPBAR1Q8TDU6 330 aa18.53■□□□□ 0.56
FAM49B-208ENST00000518344 ANP32BQ92688 251 aaKnown RBP18.53■□□□□ 0.56
FAM49B-208ENST00000518344 NAT6Q93015 286 aa18.53■□□□□ 0.56
FAM49B-208ENST00000518344 ZSCAN5AQ9BUG6 496 aa18.53■□□□□ 0.56
FAM49B-208ENST00000518344 CDH19Q9H159 772 aa18.53■□□□□ 0.56
FAM49B-208ENST00000518344 CARD9Q9H257 536 aa18.53■□□□□ 0.56
FAM49B-208ENST00000518344 ARFGAP3Q9NP61 516 aa18.53■□□□□ 0.56
FAM49B-208ENST00000518344 SPATS2LQ9NUQ6 558 aaKnown RBP18.53■□□□□ 0.56
FAM49B-208ENST00000518344 HACD3Q9P035 362 aa18.53■□□□□ 0.56
FAM49B-208ENST00000518344 ZNHIT2Q9UHR6 403 aa18.53■□□□□ 0.56
FAM49B-208ENST00000518344 PLEKHM1Q9Y4G2 1056 aa18.53■□□□□ 0.56
FAM49B-208ENST00000518344 BUD23O43709 281 aaKnown RBP18.52■□□□□ 0.56
FAM49B-208ENST00000518344 SLC25A14O95258 325 aaPredicted RBP18.52■□□□□ 0.56
FAM49B-208ENST00000518344 HMGCLP35914 325 aa18.52■□□□□ 0.56
FAM49B-208ENST00000518344 GDF10P55107 478 aa18.52■□□□□ 0.56
FAM49B-208ENST00000518344 DCDC1P59894 354 aa18.52■□□□□ 0.56
FAM49B-208ENST00000518344 PARP6Q2NL67 630 aa18.52■□□□□ 0.56
FAM49B-208ENST00000518344 ZNF648Q5T619 568 aaPredicted RBP18.52■□□□□ 0.56
FAM49B-208ENST00000518344 RANBP10Q6VN20 620 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms