RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 COG8Q96MW5 612 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 FCRL5Q96RD9 977 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 ACOX2Q99424 681 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 OSMRQ99650 979 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 SLC29A1Q99808 456 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 LRRC3Q9BY71 257 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 VTA1Q9NP79 307 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 RAPGEFL1Q9UHV5 662 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 ADGRE2Q9UHX3 823 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 ZNF112Q9UJU3 913 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 FBXW11Q9UKB1 542 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 PCDHGB4Q9UN71 923 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 RBMX2Q9Y388 322 aaKnown RBP6.64□□□□□ -1.35
CPNE3-203ENST00000517490 PTCH2Q9Y6C5 1203 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 NHSQ6T4R5 1651 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 KAT6AQ92794 2004 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 TAF1P21675 1872 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 TCRBV3S1A0A5B6 114 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 PRORSD1PA6NEY8 169 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 POM121CA8CG34 1229 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 ANGPTL1O95841 491 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 F7P08709 466 aaPredicted RBP6.64□□□□□ -1.35
CPNE3-203ENST00000517490 ZNF286BP0CG31 522 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 YWHAQP27348 245 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 FMO4P31512 558 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 ALDH3A2P51648 485 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 INHBCP55103 352 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 IL2P60568 153 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 NFATC3Q12968 1075 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 FAM187BQ17R55 369 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 WSCD1Q658N2 575 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 IQSEC1Q6DN90 963 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 CNSTQ6PJW8 725 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 DCDC5Q6ZRR9 648 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 MILR1Q7Z6M3 343 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 KRT73Q86Y46 540 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 TAGAPQ8N103 731 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 TXNDC5Q8NBS9 432 aaKnown RBP6.64□□□□□ -1.35
CPNE3-203ENST00000517490 OR9I1Q8NGQ6 314 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 TSPEARQ8WU66 669 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 NDRG1Q92597 394 aaKnown RBP6.64□□□□□ -1.35
CPNE3-203ENST00000517490 MYDGFQ969H8 173 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 RDH12Q96NR8 316 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 APOL5Q9BWW9 433 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 ACTR8Q9H981 624 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 LATS2Q9NRM7 1088 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.64□□□□□ -1.352e-8■■■□□ 15.4
CPNE3-203ENST00000517490 MTRRQ9UBK8 725 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 MATN3O15232 486 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 RGS10O43665 173 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 COQ9O75208 318 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 CYBBP04839 570 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 SLC35E2BP0CK96 405 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 PIM1P11309 404 aaPredicted RBP6.64□□□□□ -1.35
CPNE3-203ENST00000517490 SLC26A3P40879 764 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 CLCQ05315 142 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 PMS2P3Q13401 168 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 RAB6CQ53S08 254 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 INO80DQ53TQ3 878 aaPredicted RBP6.64□□□□□ -1.35
CPNE3-203ENST00000517490 BRMS1LQ5PSV4 323 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 TSTD2Q5T7W7 516 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 PRR23BQ6ZRT6 265 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 CRYBG2Q8N1P7 616 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 KDM1BQ8NB78 822 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 GTF3C2Q8WUA4 911 aaPredicted RBP6.64□□□□□ -1.35
CPNE3-203ENST00000517490 STON2Q8WXE9 905 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 ARNTL2Q8WYA1 636 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 HTRA1Q92743 480 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 UPF1Q92900 1129 aaKnown RBP eCLIP6.64□□□□□ -1.35
CPNE3-203ENST00000517490 SERPINB11Q96P15 392 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 CINPQ9BW66 212 aaPredicted RBP6.64□□□□□ -1.35
CPNE3-203ENST00000517490 NPLQ9BXD5 320 aaPredicted RBP6.64□□□□□ -1.35
CPNE3-203ENST00000517490 TDRD1Q9BXT4 1180 aaKnown RBP6.64□□□□□ -1.35
CPNE3-203ENST00000517490 FTHL17Q9BXU8 183 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 RAB6CQ9H0N0 254 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 RPF2Q9H7B2 306 aaKnown RBP6.64□□□□□ -1.35
CPNE3-203ENST00000517490 ELP3Q9H9T3 547 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 CRNNQ9UBG3 495 aaPredicted RBP6.64□□□□□ -1.35
CPNE3-203ENST00000517490 KLHL3Q9UH77 587 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 COL1A2P08123 1366 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 FAM25AB3EWG3 89 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 FAM25CB3EWG5 89 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 FAM25GB3EWG6 89 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 C9JVG2 144 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 CLDN5O00501 218 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 SLC7A4O43246 635 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 TSPAN1O60635 241 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 SCELO95171 688 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 STBD1O95210 358 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 PARNO95453 639 aaKnown RBP6.64□□□□□ -1.35
CPNE3-203ENST00000517490 KRT6AP02538 564 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 KRT6BP04259 564 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 UGT2B4P06133 528 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 HIST1H2AGP0C0S8 130 aaPredicted RBP6.64□□□□□ -1.35
CPNE3-203ENST00000517490 UROSP10746 265 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 HIST1H2ADP20671 130 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 NR4A1P22736 598 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 KRT6CP48668 564 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 DNAJC14Q6Y2X3 702 aaPredicted RBP6.64□□□□□ -1.35
CPNE3-203ENST00000517490 ZNF534Q76KX8 674 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms