RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 LRRC61Q9BV99 259 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 FICDQ9BVA6 458 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 FRMD8Q9BZ67 464 aaPredicted RBP11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 CYP4F12Q9HCS2 524 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 GOLGA6AQ9NYA3 693 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 IL17CQ9P0M4 197 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 NFKBIL1Q9UBC1 381 aaPredicted RBP11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 TTC7AQ9ULT0 858 aaPredicted RBP11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 PCDHGA1Q9Y5H4 931 aa11.09□□□□□ -0.63
SCARNA20-201ENST00000516768 FAM221BA6H8Z2 402 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 USP27XA6NNY8 438 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 FADS2P1A8MWK0 482 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 PPFIA2O75334 1257 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 IVLP07476 585 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 ANXA6P08133 673 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 CDK4P11802 303 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 CKMT1AP12532 417 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 ACP1P24666 158 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 POLD2P49005 469 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 SHC2P98077 582 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 CCDC173Q0VFZ6 552 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 DNAJC3Q13217 504 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 OLIG2Q13516 323 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 SPARCL1Q14515 664 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 TAF1AQ15573 450 aaPredicted RBP11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 DEFB133Q30KQ1 61 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 ZDHHC20Q5W0Z9 365 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 ZCCHC8Q6NZY4 707 aaKnown RBP11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 OGFOD3Q6PK18 319 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 RAB44Q7Z6P3 723 aaPredicted RBP11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 CHCHD4Q8N4Q1 142 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 PDCD7Q8N8D1 485 aaKnown RBP11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 PRELID2Q8N945 189 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 BLOC1S5Q8TDH9 187 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 GPBAR1Q8TDU6 330 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 SCG3Q8WXD2 468 aaKnown RBP11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 LRRC45Q96CN5 670 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 PDXPQ96GD0 296 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 APOLD1Q96LR9 279 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 PLEKHG4BQ96PX9 1271 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 TBL1YQ9BQ87 522 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 APOL2Q9BQE5 337 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 ZSCAN5AQ9BUG6 496 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 BOCQ9BWV1 1114 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 SPATA16Q9BXB7 569 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 TMEM168Q9H0V1 697 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 ETNK1Q9HBU6 452 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 BPIFA1Q9NP55 256 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 IL26Q9NPH9 171 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 TRNAU1APQ9NX07 287 aaKnown RBP11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 FEZ2Q9UHY8 353 aaPredicted RBP11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 MOSPD1Q9UJG1 213 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 PYCARDQ9ULZ3 195 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 TMEM98Q9Y2Y6 226 aa11.08□□□□□ -0.64
SCARNA20-201ENST00000516768 LY6G6EA0A0G2JKS1 128 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 C2orf81A6NN90 581 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 ERI2A8K979 691 aaKnown RBP11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 INPP4BO15327 924 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 USP12O75317 370 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 SLC25A14O95258 325 aaPredicted RBP11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 AP2A1O95782 977 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 TOP3BO95985 862 aaKnown RBP11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 IFNB1P01574 187 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 ATP1A1P05023 1023 aaKnown RBP11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 CELA2BP08218 269 aaPredicted RBP11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 ETS1P14921 441 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 LPOP22079 712 aaPredicted RBP11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 ACTN2P35609 894 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 FDFT1P37268 417 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 KCNJ1P48048 391 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 ACADVLP49748 655 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 DUSP3P51452 185 aaPredicted RBP11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 ILKQ13418 452 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 PYCR3Q53H96 274 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 C6orf132Q5T0Z8 1188 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 PDPK2PQ6A1A2 396 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 C4orf22Q6V702 233 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 GLT6D1Q7Z4J2 308 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 GKN2Q86XP6 184 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 TRAM1L1Q8N609 369 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 GLIS1Q8NBF1 620 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 PTCD2Q8WV60 388 aaKnown RBP11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 MS4A14Q96JA4 679 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 OSBPL9Q96SU4 736 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 C19orf43Q9BQ61 176 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 LRRC40Q9H9A6 602 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 CARS2Q9HA77 564 aaKnown RBP11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 TRIM39Q9HCM9 518 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 NCKIPSDQ9NZQ3 722 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 VPS18Q9P253 973 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 SUFUQ9UMX1 484 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 DOLKQ9UPQ8 538 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 PKP3Q9Y446 797 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 U3KQA8 63 aa11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 COL5A1P20908 1838 aaPredicted RBP11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 TP53BP1Q12888 1972 aaPredicted RBP11.07□□□□□ -0.64
SCARNA20-201ENST00000516768 EME2A4GXA9 379 aaPredicted RBP11.06□□□□□ -0.64
SCARNA20-201ENST00000516768 CES2O00748 559 aa11.06□□□□□ -0.64
SCARNA20-201ENST00000516768 BUD23O43709 281 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms