RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 SLC12A2P55011 1212 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 TMPRSS3P57727 454 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 SCN1BQ07699 218 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 ACTN3Q08043 901 aaPredicted RBP4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 SREBF2Q12772 1141 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 FOXE3Q13461 319 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 LAMB3Q13751 1172 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 PTK6Q13882 451 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 PNLIPRP3Q17RR3 467 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 MIDNQ504T8 468 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 TTC39AQ5SRH9 613 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 DHRS7BQ6IAN0 325 aaPredicted RBP4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 PPP1R21Q6ZMI0 780 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 LINC00696Q6ZRV3 163 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 TRILQ7L0X0 811 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 HAUS6Q7Z4H7 955 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 ADCK2Q7Z695 626 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 DSG4Q86SJ6 1040 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 FAM217AQ8IXS0 508 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 RBFAQ8N0V3 343 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 SEPT1Q8WYJ6 367 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 ERGIC1Q969X5 290 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 EME1Q96AY2 570 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 ZNF570Q96NI8 536 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 INTS14Q96SY0 518 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 CDK5RAP1Q96SZ6 601 aaKnown RBP4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 MSTO1Q9BUK6 570 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 NPFFR1Q9GZQ6 430 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 AAMDCQ9H7C9 122 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 NOL11Q9H8H0 719 aaKnown RBP4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 MMRN2Q9H8L6 949 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 EPB41L5Q9HCM4 733 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 GPR108Q9NPR9 543 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 HINT3Q9NQE9 182 aaKnown RBP4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 PAPOLBQ9NRJ5 636 aaKnown RBP4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 CYSLTR2Q9NS75 346 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 ADPRHL2Q9NX46 363 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 LIPT1Q9Y234 373 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 KLHL20Q9Y2M5 609 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 STON1Q9Y6Q2 735 aa4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.29□□□□□ -1.72
RNU6-488P-201ENST00000515918 ZNF541Q9H0D2 1346 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 A0A0B4J293 547 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 ANXA2P2A6NMY6 339 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 KDM4EB2RXH2 506 aaPredicted RBP4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 CLIC2O15247 247 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 STX6O43752 255 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 KCNK5O95279 499 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 SNRNP70P08621 437 aaKnown RBP4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 THEGLP0DJG4 465 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 PDGFRAP16234 1089 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 HOXA5P20719 270 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 CASTP20810 708 aaKnown RBP4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 PSMA3P25788 255 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 CALRP27797 417 aaKnown RBP4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 YBEYP58557 167 aaPredicted RBP4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 HNRNPKP61978 463 aaKnown RBP eCLIP4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 SIRPAP78324 504 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 PPP2R2BQ00005 443 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 PLP2Q04941 152 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 LASP1Q14847 261 aaKnown RBP4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 PROSER3Q2NL68 480 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 MIIPQ5JXC2 388 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 GPSM1Q86YR5 675 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 TUSC5Q8IXB3 177 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 SPATA6LQ8N4H0 392 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 CEP76Q8TAP6 659 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 OSR1Q8TAX0 266 aaPredicted RBP4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 GPT2Q8TD30 523 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 SLC9A6Q92581 669 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 EXOC4Q96A65 974 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 MOAP1Q96BY2 351 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 C20orf173Q96LM9 149 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 CCDC43Q96MW1 224 aaKnown RBP4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 ZNF558Q96NG5 402 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 DACH2Q96NX9 599 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 NUDCD1Q96RS6 583 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 C1QTNF3Q9BXJ4 246 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 B3GNT4Q9C0J1 378 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 CPNE5Q9HCH3 593 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 RNF146Q9NTX7 359 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 PRMT7Q9NVM4 692 aaPredicted RBP4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 CISD1Q9NZ45 108 aaKnown RBP4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 DDX25Q9UHL0 483 aaKnown RBP4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 TSPYL4Q9UJ04 414 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 CNOT11Q9UKZ1 510 aaKnown RBP4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 PA2G4Q9UQ80 394 aaKnown RBP4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 PCDHGA5Q9Y5G8 931 aa4.28□□□□□ -1.72
RNU6-488P-201ENST00000515918 KIR2DS5A0A0G2JLQ3 304 aa4.27□□□□□ -1.73
RNU6-488P-201ENST00000515918 TMEM8BA6NDV4 472 aa4.27□□□□□ -1.73
RNU6-488P-201ENST00000515918 KIR2DS3K7RE56 304 aa4.27□□□□□ -1.73
RNU6-488P-201ENST00000515918 PLPP2O43688 288 aa4.27□□□□□ -1.73
RNU6-488P-201ENST00000515918 FOXD2O60548 495 aaPredicted RBP4.27□□□□□ -1.73
RNU6-488P-201ENST00000515918 GH2P01242 217 aa4.27□□□□□ -1.73
RNU6-488P-201ENST00000515918 GBAP04062 536 aa4.27□□□□□ -1.73
RNU6-488P-201ENST00000515918 LINGO3P0C6S8 592 aa4.27□□□□□ -1.73
RNU6-488P-201ENST00000515918 CBSLP0DN79 551 aa4.27□□□□□ -1.73
RNU6-488P-201ENST00000515918 ENO3P13929 434 aaPredicted RBP4.27□□□□□ -1.73
RNU6-488P-201ENST00000515918 PFKFB1P16118 471 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms