RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 EID2BQ96D98 161 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 LRRC39Q96DD0 335 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 SERAC1Q96JX3 654 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 KLF6Q99612 283 aaPredicted RBP7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 ORAI3Q9BRQ5 295 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 FOXP3Q9BZS1 431 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 PHACTR1Q9C0D0 580 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 EBF2Q9HAK2 575 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 EPB41L5Q9HCM4 733 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 FZD3Q9NPG1 666 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 SYBUQ9NX95 663 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 SAMD15Q9P1V8 674 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 DMGDHQ9UI17 866 aaKnown RBP7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 SOX13Q9UN79 622 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 PCDHGA5Q9Y5G8 931 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 ARL5AQ9Y689 179 aa7.56□□□□□ -1.2
HMGXB3-204ENST00000513318 ATXN2Q99700 1313 aaKnown RBP7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 A0A1B0GTW7 788 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 ESYT3A0FGR9 886 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 SDR42E2A6NKP2 422 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 A6NNZ2 444 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 PRR5-ARHGAP8B1AHC4 643 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 E7ESA3 106 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 TOR1BO14657 336 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 EIF3HO15372 352 aaKnown RBP eCLIP7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 BCAT2O15382 392 aaPredicted RBP7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 BUD23O43709 281 aaKnown RBP7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 MAGEC1O60732 1142 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 AVILO75366 819 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 PCCBP05166 539 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 RHOXF2BP0C7M4 288 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 BPIP17213 487 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 PSMA3P25788 255 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 MAOBP27338 520 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 TEAD1P28347 426 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 CD38P28907 300 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 IGFALSP35858 605 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 GPR1P46091 355 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 RABIFP47224 123 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 AFF3P51826 1226 aaKnown RBP7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 PLTPP55058 493 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 CRADDP78560 199 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 ACVR1Q04771 509 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 DHX9Q08211 1270 aaKnown RBP7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 OVGP1Q12889 678 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 CUL1Q13616 776 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 ITGA9Q13797 1035 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 STAT4Q14765 748 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 LPAL2Q16609 132 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 WSCD2Q2TBF2 565 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 CCDC38Q502W7 563 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 DNAJC21Q5F1R6 531 aaKnown RBP7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 TSTD2Q5T7W7 516 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 PDPK2PQ6A1A2 396 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 RAET1GQ6H3X3 334 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 CASC4Q6P4E1 433 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 ZDHHC24Q6UX98 284 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 GCNT7Q6ZNI0 430 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 CENPUQ71F23 418 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 ABI3BPQ7Z7G0 1075 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 IQCHQ86VS3 1027 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 ZCCHC9Q8N567 271 aaKnown RBP7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 TRAM1L1Q8N609 369 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 MFSD2AQ8NA29 543 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 SUMF1Q8NBK3 374 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 GPR26Q8NDV2 337 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 OR13C4Q8NGS5 318 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 C1orf216Q8TAB5 229 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 CEP76Q8TAP6 659 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 DTX3LQ8TDB6 740 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 RUBCNQ92622 972 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 ART4Q93070 314 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 SCAMP4Q969E2 229 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 SKA1Q96BD8 255 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 DNAJC1Q96KC8 554 aaKnown RBP7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 SLC6A18Q96N87 628 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 MYOCQ99972 504 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 RHOXF2Q9BQY4 288 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 NAT9Q9BTE0 207 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 ZSCAN5AQ9BUG6 496 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 KIFC1Q9BW19 673 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 MIR1-1HGQ9H1L0 117 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 ABCG8Q9H221 673 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 FAM83DQ9H4H8 585 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 TM9SF3Q9HD45 589 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 AASDHPPTQ9NRN7 309 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 FAM86C1Q9NVL1 165 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 NLE1Q9NVX2 485 aaPredicted RBP7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 MTRF1LQ9UGC7 380 aaKnown RBP7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 CD84Q9UIB8 345 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 GMEB2Q9UKD1 530 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 APPL1Q9UKG1 709 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 PILRBQ9UKJ0 227 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 HS3ST3A1Q9Y663 406 aa7.55□□□□□ -1.2
HMGXB3-204ENST00000513318 PCM1Q15154 2024 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 GPR179Q6PRD1 2367 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 GLYATL1P3A0A0U1RQE8 302 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 FAM237BA0A1B0GVD1 139 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 MAGEB16A2A368 324 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 POM121BA6NF01 834 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms