RNA–Protein interactions for RNA: ENST00000512883.1

ARHGEF28-211, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2 BASIC

Gene ARHGEF28, Length 2,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-211ENST00000512883 FARP2O94887 1054 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 MMP10P09238 476 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 BMPR1AP36894 532 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 PIGAP37287 484 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 SNX16P57768 344 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 NCS1P62166 190 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 DAG1Q14118 895 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 PAGE3Q5JUK9 113 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 SYPL2Q5VXT5 272 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 SCIMPQ6UWF3 145 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 TFAP2DQ7Z6R9 452 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 ZNF486Q96H40 463 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 ITCHQ96J02 903 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 HOXD1Q9GZZ0 328 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 RNF38Q9H0F5 515 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 TRIT1Q9H3H1 467 aaKnown RBP16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 FZD8Q9H461 694 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 MRGBPQ9NV56 204 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 DNAJC15Q9Y5T4 150 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 BBIP1A8MTZ0 92 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 TBX1O43435 398 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 KPNA2P52292 529 aaKnown RBP16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 TPI1P60174 286 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 ADIGQ0VDE8 80 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 EFCAB12Q6NXP0 572 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 CALML6Q8TD86 181 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 TEX37Q96LM6 180 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 HACD3Q9P035 362 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 PCDHA9Q9Y5H5 950 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 SPO11Q9Y5K1 396 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 UBR3Q6ZT12 1888 aa16.09■□□□□ 0.17
ARHGEF28-211ENST00000512883 PARNO95453 639 aaKnown RBP16.08■□□□□ 0.17
ARHGEF28-211ENST00000512883 ARL1P40616 181 aaPredicted RBP16.08■□□□□ 0.17
ARHGEF28-211ENST00000512883 MATKP42679 507 aa16.08■□□□□ 0.17
ARHGEF28-211ENST00000512883 MAP2K4P45985 399 aa16.08■□□□□ 0.17
ARHGEF28-211ENST00000512883 NDUFV1P49821 464 aa16.08■□□□□ 0.17
ARHGEF28-211ENST00000512883 ALDH3A2P51648 485 aa16.08■□□□□ 0.17
ARHGEF28-211ENST00000512883 OR4D2P58180 307 aa16.08■□□□□ 0.17
ARHGEF28-211ENST00000512883 SH3BP2P78314 561 aa16.08■□□□□ 0.17
ARHGEF28-211ENST00000512883 CD47Q08722 323 aa16.08■□□□□ 0.17
ARHGEF28-211ENST00000512883 SNX17Q15036 470 aa16.08■□□□□ 0.17
ARHGEF28-211ENST00000512883 DGUOKQ16854 277 aa16.08■□□□□ 0.17
ARHGEF28-211ENST00000512883 AGAP9Q5VTM2 703 aa16.08■□□□□ 0.17
ARHGEF28-211ENST00000512883 NAPEPLDQ6IQ20 393 aa16.08■□□□□ 0.17
ARHGEF28-211ENST00000512883 MINDY2Q8NBR6 621 aa16.08■□□□□ 0.17
ARHGEF28-211ENST00000512883 CHDHQ8NE62 594 aaPredicted RBP16.08■□□□□ 0.17
ARHGEF28-211ENST00000512883 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.08■□□□□ 0.172e-6■■■■■ 54.9
ARHGEF28-211ENST00000512883 NODALQ96S42 347 aa16.08■□□□□ 0.17
ARHGEF28-211ENST00000512883 NTN4Q9HB63 628 aa16.08■□□□□ 0.17
ARHGEF28-211ENST00000512883 INTS7Q9NVH2 962 aaKnown RBP16.08■□□□□ 0.17
ARHGEF28-211ENST00000512883 NUDT5Q9UKK9 219 aa16.08■□□□□ 0.17
ARHGEF28-211ENST00000512883 FBXO5Q9UKT4 447 aa16.08■□□□□ 0.17
ARHGEF28-211ENST00000512883 TNFSF13BQ9Y275 285 aa16.08■□□□□ 0.17
ARHGEF28-211ENST00000512883 PMF1-BGLAPU3KQ54 211 aa16.08■□□□□ 0.17
ARHGEF28-211ENST00000512883 TBC1D4O60343 1298 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 MBTD1Q05BQ5 628 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 PAFAH1B3Q15102 231 aaKnown RBP16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 LRIT3Q3SXY7 679 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 RBM48Q5RL73 367 aaKnown RBP16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 PKN3Q6P5Z2 889 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 STRADAQ7RTN6 431 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 SLC2A14Q8TDB8 520 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 ACAD9Q9H845 621 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 PIGVQ9NUD9 493 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 ZNF214Q9UL59 606 aaPredicted RBP16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 DCLK1O15075 740 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 PMPCBO75439 489 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 SLC4A1P02730 911 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 ENO2P09104 434 aaPredicted RBP16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 PRKACGP22612 351 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 LMO2P25791 158 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 ARNTP27540 789 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 CHRNA4P43681 627 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 HMGCS2P54868 508 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 CCNA1P78396 465 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 SLC25A52Q3SY17 297 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 NOMO2Q5JPE7 1267 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 GPR158Q5T848 1215 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 RSBN1Q5VWQ0 802 aaPredicted RBP16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 GLYATQ6IB77 296 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 TMC5Q6UXY8 1006 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 RBM23Q86U06 439 aaKnown RBP16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 OR52K2Q8NGK3 314 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 TWIST2Q8WVJ9 160 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 MUL1Q969V5 352 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 NSUN5Q96P11 429 aaKnown RBP16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 FICDQ9BVA6 458 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 KIFC1Q9BW19 673 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 NEK6Q9HC98 313 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 GTF2IRD1Q9UHL9 959 aa16.08■□□□□ 0.16
ARHGEF28-211ENST00000512883 A0A087X1B8 175 aa16.07■□□□□ 0.16
ARHGEF28-211ENST00000512883 CCL22O00626 93 aa16.07■□□□□ 0.16
ARHGEF28-211ENST00000512883 SNX2O60749 519 aa16.07■□□□□ 0.16
ARHGEF28-211ENST00000512883 LTA4HP09960 611 aaKnown RBP16.07■□□□□ 0.16
ARHGEF28-211ENST00000512883 PSMB9P28065 219 aa16.07■□□□□ 0.16
ARHGEF28-211ENST00000512883 CD40LGP29965 261 aa16.07■□□□□ 0.16
ARHGEF28-211ENST00000512883 MTHFRP42898 656 aa16.07■□□□□ 0.16
ARHGEF28-211ENST00000512883 IL1RL1Q01638 556 aa16.07■□□□□ 0.16
ARHGEF28-211ENST00000512883 BST2Q10589 180 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms