RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 GFM1Q96RP9 751 aaKnown RBP7.22□□□□□ -1.25
USP46-208ENST00000512656 ERGIC2Q96RQ1 377 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 APOOQ9BUR5 198 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 CLPBQ9H078 707 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 KLC2Q9H0B6 622 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 TCEAL2Q9H3H9 227 aaPredicted RBP7.22□□□□□ -1.25
USP46-208ENST00000512656 ACSS3Q9H6R3 686 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 LRRC19Q9H756 370 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 CAAP1Q9H8G2 361 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 PARVAQ9NVD7 372 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 KCTD5Q9NXV2 234 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 LHX3Q9UBR4 397 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 KLQ9UEF7 1012 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 ADGRE2Q9UHX3 823 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 MYO6Q9UM54 1294 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 GPR34Q9UPC5 381 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 AP4E1Q9UPM8 1137 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 ATP8A1Q9Y2Q0 1164 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 ENTPD2Q9Y5L3 495 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 SHROOM3Q8TF72 1996 aa7.22□□□□□ -1.25
USP46-208ENST00000512656 CHD5Q8TDI0 1954 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 A0A1W2PQ67 120 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 TCRBV5S1A1TA0A578 114 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 LRRC10BA6NIK2 292 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 J3KR12 359 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 NTN3O00634 580 aaPredicted RBP7.21□□□□□ -1.26
USP46-208ENST00000512656 TNFRSF10CO14798 259 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 INSIG1O15503 277 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 PRPSAP2O60256 369 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 PALMO75781 387 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 TNFSF15O95150 251 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 ITGA2BP08514 1039 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 HOXC4P09017 264 aaPredicted RBP7.21□□□□□ -1.26
USP46-208ENST00000512656 ELFN1P0C7U0 828 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 ITIH2P19823 946 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 PSMA2P25787 234 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 MMP12P39900 470 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 PAPOLAP51003 745 aaKnown RBP7.21□□□□□ -1.26
USP46-208ENST00000512656 RENBPP51606 427 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 KIAA1024LP59773 190 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 BCL2L1Q07817 233 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 NSUN2Q08J23 767 aaKnown RBP eCLIP7.21□□□□□ -1.26
USP46-208ENST00000512656 INPP5AQ14642 412 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 RFTN1Q14699 578 aaPredicted RBP7.21□□□□□ -1.26
USP46-208ENST00000512656 ALG11Q2TAA5 492 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 ERMARDQ5T6L9 678 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 CRTC1Q6UUV9 634 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 ENPP7Q6UWV6 458 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 RBM43Q6ZSC3 357 aaKnown RBP7.21□□□□□ -1.26
USP46-208ENST00000512656 CLEC14AQ86T13 490 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 KRTAP19-1Q8IUB9 90 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 PSTKQ8IV42 348 aaKnown RBP7.21□□□□□ -1.26
USP46-208ENST00000512656 FBXO39Q8N4B4 442 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 LZTR1Q8N653 840 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 KYQ8NBH2 561 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 PCDH19Q8TAB3 1148 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 SNRNP27Q8WVK2 155 aaKnown RBP7.21□□□□□ -1.26
USP46-208ENST00000512656 TSACCQ96A04 125 aaPredicted RBP7.21□□□□□ -1.26
USP46-208ENST00000512656 CCDC74AQ96AQ1 378 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 DMRTB1Q96MA1 342 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 TMEM74Q96NL1 305 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 RBM15Q96T37 977 aaKnown RBP eCLIP7.21□□□□□ -1.26
USP46-208ENST00000512656 CINPQ9BW66 212 aaPredicted RBP7.21□□□□□ -1.26
USP46-208ENST00000512656 NAT10Q9H0A0 1025 aaKnown RBP7.21□□□□□ -1.26
USP46-208ENST00000512656 DHX35Q9H5Z1 703 aaKnown RBP7.21□□□□□ -1.26
USP46-208ENST00000512656 SP110Q9HB58 689 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 PDFQ9HBH1 243 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 CPNE5Q9HCH3 593 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 EPB41L5Q9HCM4 733 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 NPHS2Q9NP85 383 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 RAD18Q9NS91 495 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 LMBRD1Q9NUN5 540 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 SIRPGQ9P1W8 387 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 COQ6Q9Y2Z9 468 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 DGKBQ9Y6T7 804 aa7.21□□□□□ -1.26
USP46-208ENST00000512656 RP1P56715 2156 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 HECTD1Q9ULT8 2610 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.2□□□□□ -1.26
USP46-208ENST00000512656 CDRT15L2A8MXV6 281 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 D6RAR5 112 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 K7ENP7 123 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 DFFAO00273 331 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 EIF1AYO14602 144 aaKnown RBP7.2□□□□□ -1.26
USP46-208ENST00000512656 PLD2O14939 933 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 ZW10O43264 779 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 BUB1BO60566 1050 aaPredicted RBP7.2□□□□□ -1.26
USP46-208ENST00000512656 C1QL1O75973 258 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 RECQL5O94762 991 aaPredicted RBP7.2□□□□□ -1.26
USP46-208ENST00000512656 PCCBP05166 539 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 RPLP0P05388 317 aaKnown RBP7.2□□□□□ -1.26
USP46-208ENST00000512656 CTSBP07858 339 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 JMJD7P0C870 316 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 ATP1A3P13637 1013 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 KRT10P13645 584 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 PNLIPP16233 465 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 ADMP35318 185 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 HSPA9P38646 679 aaKnown RBP7.2□□□□□ -1.26
USP46-208ENST00000512656 ANP32AP39687 249 aaKnown RBP7.2□□□□□ -1.26
USP46-208ENST00000512656 HCAR3P49019 387 aa7.2□□□□□ -1.26
USP46-208ENST00000512656 INHBCP55103 352 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms