RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 MRPL49Q13405 166 aaKnown RBP12.47□□□□□ -0.41
DDX41-215ENST00000512431 DNASE1L3Q13609 305 aa12.47□□□□□ -0.41
DDX41-215ENST00000512431 NAA30Q147X3 362 aaPredicted RBP12.47□□□□□ -0.41
DDX41-215ENST00000512431 Q6ZVL8 140 aa12.47□□□□□ -0.41
DDX41-215ENST00000512431 HSD11B1LQ7Z5J1 315 aa12.47□□□□□ -0.41
DDX41-215ENST00000512431 ZNF677Q86XU0 584 aa12.47□□□□□ -0.41
DDX41-215ENST00000512431 AVL9Q8NBF6 648 aa12.47□□□□□ -0.41
DDX41-215ENST00000512431 RNF31Q96EP0 1072 aa12.47□□□□□ -0.41
DDX41-215ENST00000512431 OR6C1Q96RD1 312 aa12.47□□□□□ -0.41
DDX41-215ENST00000512431 C11orf70Q9BRQ4 267 aa12.47□□□□□ -0.41
DDX41-215ENST00000512431 SLC39A8Q9C0K1 460 aa12.47□□□□□ -0.41
DDX41-215ENST00000512431 SIDT1Q9NXL6 827 aaKnown RBP12.47□□□□□ -0.41
DDX41-215ENST00000512431 ZNHIT2Q9UHR6 403 aa12.47□□□□□ -0.41
DDX41-215ENST00000512431 LNPEPQ9UIQ6 1025 aa12.47□□□□□ -0.41
DDX41-215ENST00000512431 RWDD2AQ9UIY3 292 aa12.47□□□□□ -0.41
DDX41-215ENST00000512431 FZD10Q9ULW2 581 aa12.47□□□□□ -0.41
DDX41-215ENST00000512431 PHTF1Q9UMS5 762 aa12.47□□□□□ -0.41
DDX41-215ENST00000512431 ZNF451Q9Y4E5 1061 aa12.47□□□□□ -0.41
DDX41-215ENST00000512431 PCDHGA9Q9Y5G4 932 aaKnown RBP12.47□□□□□ -0.41
DDX41-215ENST00000512431 CACNA1DQ01668 2161 aa12.46□□□□□ -0.41
DDX41-215ENST00000512431 WIPF3A6NGB9 483 aa12.46□□□□□ -0.41
DDX41-215ENST00000512431 C21orf140B9A014 251 aa12.46□□□□□ -0.41
DDX41-215ENST00000512431 DAPK3O43293 454 aa12.46□□□□□ -0.41
DDX41-215ENST00000512431 SOCS5O75159 536 aa12.46□□□□□ -0.41
DDX41-215ENST00000512431 SORBS2O94875 1100 aaKnown RBP12.46□□□□□ -0.41
DDX41-215ENST00000512431 PYGLP06737 847 aa12.46□□□□□ -0.41
DDX41-215ENST00000512431 POU3F2P20265 443 aaPredicted RBP12.46□□□□□ -0.41
DDX41-215ENST00000512431 RFC1P35251 1148 aaPredicted RBP12.46□□□□□ -0.41
DDX41-215ENST00000512431 CCL11P51671 97 aa12.46□□□□□ -0.41
DDX41-215ENST00000512431 TPD52L1Q16890 204 aaPredicted RBP12.46□□□□□ -0.41
DDX41-215ENST00000512431 C1QL3Q5VWW1 255 aa12.46□□□□□ -0.41
DDX41-215ENST00000512431 IYDQ6PHW0 289 aa12.46□□□□□ -0.41
DDX41-215ENST00000512431 CHST15Q7LFX5 561 aaPredicted RBP12.46□□□□□ -0.41
DDX41-215ENST00000512431 SLC34A3Q8N130 599 aa12.46□□□□□ -0.41
DDX41-215ENST00000512431 SLC30A5Q8TAD4 765 aa12.46□□□□□ -0.41
DDX41-215ENST00000512431 AP2M1Q96CW1 435 aa12.46□□□□□ -0.41
DDX41-215ENST00000512431 ELMO2Q96JJ3 720 aa12.46□□□□□ -0.41
DDX41-215ENST00000512431 C9orf72Q96LT7 481 aa12.46□□□□□ -0.41
DDX41-215ENST00000512431 C5orf34Q96MH7 638 aa12.46□□□□□ -0.41
DDX41-215ENST00000512431 HERPUD2Q9BSE4 406 aa12.46□□□□□ -0.41
DDX41-215ENST00000512431 TRIM55Q9BYV6 548 aa12.46□□□□□ -0.41
DDX41-215ENST00000512431 PCDHGC4Q9Y5F7 938 aa12.46□□□□□ -0.41
DDX41-215ENST00000512431 PCDHGB7Q9Y5F8 929 aa12.46□□□□□ -0.41
DDX41-215ENST00000512431 FHOD1Q9Y613 1164 aa12.46□□□□□ -0.41
DDX41-215ENST00000512431 SPENQ96T58 3664 aaKnown RBP12.45□□□□□ -0.42
DDX41-215ENST00000512431 ITPR2Q14571 2701 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 KIR2DS5A0A0G2JLQ3 304 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 A0A0G2JNG1 304 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 OR5K4A6NMS3 321 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 KIR2DS3K7RE56 304 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 DFFAO00273 331 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 TOX3O15405 576 aaPredicted RBP12.45□□□□□ -0.42
DDX41-215ENST00000512431 SNX2O60749 519 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 DPM1O60762 260 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 RASSF9O75901 435 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 EML2O95834 649 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 LDLRP01130 860 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 AMD1P17707 334 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 LEPRP48357 1165 aaKnown RBP12.45□□□□□ -0.42
DDX41-215ENST00000512431 SEPHS1P49903 392 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 RPS15P62841 145 aaKnown RBP12.45□□□□□ -0.42
DDX41-215ENST00000512431 IL10RBQ08334 325 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 KIR2DS5Q14953 304 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 CHRNA6Q15825 494 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 MAN2A1Q16706 1144 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 KLHDC7AQ5VTJ3 777 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 WDR59Q6PJI9 974 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 ADAMTSL4Q6UY14 1074 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 USP45Q70EL2 814 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 PPP1R3BQ86XI6 285 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 NDUFAF2Q8N183 169 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 CBARPQ8N350 705 aaPredicted RBP12.45□□□□□ -0.42
DDX41-215ENST00000512431 TTC13Q8NBP0 860 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 EPS8L1Q8TE68 723 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 FNIP1Q8TF40 1166 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 SPOCK2Q92563 424 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 TGM7Q96PF1 710 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 PSKH2Q96QS6 385 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 TBC1D10AQ9BXI6 508 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 GPR87Q9BY21 358 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 NDST4Q9H3R1 872 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 ACTL8Q9H568 366 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 LHX9Q9NQ69 397 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 TBC1D29Q9UFV1 150 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 ERRFI1Q9UJM3 462 aaPredicted RBP12.45□□□□□ -0.42
DDX41-215ENST00000512431 SLC5A6Q9Y289 635 aa12.45□□□□□ -0.42
DDX41-215ENST00000512431 CELSR2Q9HCU4 2923 aa12.44□□□□□ -0.42
DDX41-215ENST00000512431 MN1Q10571 1320 aaPredicted RBP12.44□□□□□ -0.42
DDX41-215ENST00000512431 PES1O00541 588 aaKnown RBP12.44□□□□□ -0.42
DDX41-215ENST00000512431 CCP110O43303 1012 aa12.44□□□□□ -0.42
DDX41-215ENST00000512431 HTRA2O43464 458 aaPredicted RBP12.44□□□□□ -0.42
DDX41-215ENST00000512431 SPAG6O75602 509 aa12.44□□□□□ -0.42
DDX41-215ENST00000512431 CYP1A1P04798 512 aaPredicted RBP12.44□□□□□ -0.42
DDX41-215ENST00000512431 PRKCSHP14314 528 aaPredicted RBP12.44□□□□□ -0.42
DDX41-215ENST00000512431 LHCGRP22888 699 aa12.44□□□□□ -0.42
DDX41-215ENST00000512431 NSFP46459 744 aaKnown RBP12.44□□□□□ -0.42
DDX41-215ENST00000512431 ZNF143P52747 638 aaPredicted RBP12.44□□□□□ -0.42
DDX41-215ENST00000512431 ELOAQ14241 798 aaKnown RBP12.44□□□□□ -0.42
DDX41-215ENST00000512431 ZNF235Q14590 738 aa12.44□□□□□ -0.42
DDX41-215ENST00000512431 LBRQ14739 615 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms