RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 ZNF711Q9Y462 761 aa16.41■□□□□ 0.22
DDX41-213ENST00000512027 PCYT1BQ9Y5K3 369 aaPredicted RBP16.41■□□□□ 0.22
DDX41-213ENST00000512027 OAS3Q9Y6K5 1087 aaKnown RBP16.41■□□□□ 0.22
DDX41-213ENST00000512027 ACACAQ13085 2346 aa16.41■□□□□ 0.22
DDX41-213ENST00000512027 NBEAQ8NFP9 2946 aa16.41■□□□□ 0.22
DDX41-213ENST00000512027 KIF26BQ2KJY2 2108 aa16.4■□□□□ 0.22
DDX41-213ENST00000512027 PDE2AO00408 941 aaPredicted RBP16.4■□□□□ 0.22
DDX41-213ENST00000512027 AURKAO14965 403 aa16.4■□□□□ 0.22
DDX41-213ENST00000512027 NOBOXO60393 691 aa16.4■□□□□ 0.22
DDX41-213ENST00000512027 CSO75390 466 aaKnown RBP16.4■□□□□ 0.22
DDX41-213ENST00000512027 ATP1A1P05023 1023 aaKnown RBP16.4■□□□□ 0.22
DDX41-213ENST00000512027 RPIAP49247 311 aa16.4■□□□□ 0.22
DDX41-213ENST00000512027 WNT3AP56704 352 aa16.4■□□□□ 0.22
DDX41-213ENST00000512027 COPS2P61201 443 aa16.4■□□□□ 0.22
DDX41-213ENST00000512027 LVRNQ6Q4G3 990 aa16.4■□□□□ 0.22
DDX41-213ENST00000512027 PID1Q7Z2X4 250 aa16.4■□□□□ 0.22
DDX41-213ENST00000512027 PEX26Q7Z412 305 aa16.4■□□□□ 0.22
DDX41-213ENST00000512027 SLC25A41Q8N5S1 370 aa16.4■□□□□ 0.22
DDX41-213ENST00000512027 CALR3Q96L12 384 aaKnown RBP16.4■□□□□ 0.22
DDX41-213ENST00000512027 GORASP1Q9BQQ3 440 aa16.4■□□□□ 0.22
DDX41-213ENST00000512027 ZFYVE1Q9HBF4 777 aa16.4■□□□□ 0.22
DDX41-213ENST00000512027 SPATS2LQ9NUQ6 558 aaKnown RBP16.4■□□□□ 0.22
DDX41-213ENST00000512027 PKD2L2Q9NZM6 624 aa16.4■□□□□ 0.22
DDX41-213ENST00000512027 NCKIPSDQ9NZQ3 722 aa16.4■□□□□ 0.22
DDX41-213ENST00000512027 AMFRQ9UKV5 643 aa16.4■□□□□ 0.22
DDX41-213ENST00000512027 SLC17A4Q9Y2C5 497 aa16.4■□□□□ 0.22
DDX41-213ENST00000512027 RAXQ9Y2V3 346 aa16.4■□□□□ 0.22
DDX41-213ENST00000512027 PRKAB1Q9Y478 270 aa16.4■□□□□ 0.22
DDX41-213ENST00000512027 HACD1B0YJ81 288 aa16.39■□□□□ 0.21
DDX41-213ENST00000512027 DDX3YO15523 660 aaKnown RBP16.39■□□□□ 0.21
DDX41-213ENST00000512027 ASMTLO95671 621 aa16.39■□□□□ 0.21
DDX41-213ENST00000512027 NDST3O95803 873 aa16.39■□□□□ 0.21
DDX41-213ENST00000512027 CTBSQ01459 385 aa16.39■□□□□ 0.21
DDX41-213ENST00000512027 OLIG2Q13516 323 aa16.39■□□□□ 0.21
DDX41-213ENST00000512027 SLC14A2Q15849 920 aa16.39■□□□□ 0.21
DDX41-213ENST00000512027 ZNF648Q5T619 568 aaPredicted RBP16.39■□□□□ 0.21
DDX41-213ENST00000512027 HENMT1Q5T8I9 393 aaKnown RBP16.39■□□□□ 0.21
DDX41-213ENST00000512027 SLC30A9Q6PML9 568 aa16.39■□□□□ 0.21
DDX41-213ENST00000512027 NRSN1Q8IZ57 195 aa16.39■□□□□ 0.21
DDX41-213ENST00000512027 GPR26Q8NDV2 337 aa16.39■□□□□ 0.21
DDX41-213ENST00000512027 GPR156Q8NFN8 814 aa16.39■□□□□ 0.21
DDX41-213ENST00000512027 IPMKQ8NFU5 416 aa16.39■□□□□ 0.21
DDX41-213ENST00000512027 CCHCR1Q8TD31 782 aa16.39■□□□□ 0.21
DDX41-213ENST00000512027 PATE1Q8WXA2 126 aa16.39■□□□□ 0.21
DDX41-213ENST00000512027 NXPE2Q96DL1 559 aa16.39■□□□□ 0.21
DDX41-213ENST00000512027 COX14Q96I36 57 aa16.39■□□□□ 0.21
DDX41-213ENST00000512027 HIC2Q96JB3 615 aa16.39■□□□□ 0.21
DDX41-213ENST00000512027 MRGPRX2Q96LB1 330 aa16.39■□□□□ 0.21
DDX41-213ENST00000512027 DPEP2Q9H4A9 486 aa16.39■□□□□ 0.21
DDX41-213ENST00000512027 FAM83DQ9H4H8 585 aa16.39■□□□□ 0.21
DDX41-213ENST00000512027 FAM153AQ9UHL3 310 aa16.39■□□□□ 0.21
DDX41-213ENST00000512027 RSPH14Q9UHP6 348 aa16.39■□□□□ 0.21
DDX41-213ENST00000512027 CNOT6Q9ULM6 557 aaKnown RBP16.39■□□□□ 0.21
DDX41-213ENST00000512027 GPSM3Q9Y4H4 160 aa16.39■□□□□ 0.21
DDX41-213ENST00000512027 GOLGA6L6A8MZA4 724 aa16.38■□□□□ 0.21
DDX41-213ENST00000512027 MTSS1O43312 755 aa16.38■□□□□ 0.21
DDX41-213ENST00000512027 IVLP07476 585 aa16.38■□□□□ 0.21
DDX41-213ENST00000512027 RBP3P10745 1247 aa16.38■□□□□ 0.21
DDX41-213ENST00000512027 PTPN7P35236 360 aa16.38■□□□□ 0.21
DDX41-213ENST00000512027 ADCY8P40145 1251 aa16.38■□□□□ 0.21
DDX41-213ENST00000512027 MAZP56270 477 aaKnown RBP16.38■□□□□ 0.21
DDX41-213ENST00000512027 EIF3EP60228 445 aaKnown RBP16.38■□□□□ 0.21
DDX41-213ENST00000512027 SIRPB2Q5JXA9 342 aa16.38■□□□□ 0.21
DDX41-213ENST00000512027 TMC3Q7Z5M5 1100 aa16.38■□□□□ 0.21
DDX41-213ENST00000512027 SDR16C5Q8N3Y7 309 aa16.38■□□□□ 0.21
DDX41-213ENST00000512027 GPBAR1Q8TDU6 330 aa16.38■□□□□ 0.21
DDX41-213ENST00000512027 NAT6Q93015 286 aa16.38■□□□□ 0.21
DDX41-213ENST00000512027 DEPDC7Q96QD5 511 aa16.38■□□□□ 0.21
DDX41-213ENST00000512027 FCRL5Q96RD9 977 aa16.38■□□□□ 0.21
DDX41-213ENST00000512027 GPR63Q9BZJ6 419 aa16.38■□□□□ 0.21
DDX41-213ENST00000512027 MAGEE1Q9HCI5 957 aa16.38■□□□□ 0.21
DDX41-213ENST00000512027 BPIFA1Q9NP55 256 aa16.38■□□□□ 0.21
DDX41-213ENST00000512027 TAAR2Q9P1P5 351 aa16.38■□□□□ 0.21
DDX41-213ENST00000512027 RALYQ9UKM9 306 aaKnown RBP16.38■□□□□ 0.21
DDX41-213ENST00000512027 ADGRG1Q9Y653 693 aa16.38■□□□□ 0.21
DDX41-213ENST00000512027 AK5Q9Y6K8 562 aa16.38■□□□□ 0.21
DDX41-213ENST00000512027 ZFYVE26Q68DK2 2539 aa16.37■□□□□ 0.21
DDX41-213ENST00000512027 TCRBV7S2A1N4TA0A589 114 aa16.37■□□□□ 0.21
DDX41-213ENST00000512027 PMS2P1A4D2B8 440 aa16.37■□□□□ 0.21
DDX41-213ENST00000512027 USP12O75317 370 aa16.37■□□□□ 0.21
DDX41-213ENST00000512027 PDX1P52945 283 aa16.37■□□□□ 0.21
DDX41-213ENST00000512027 CCL7P80098 99 aa16.37■□□□□ 0.21
DDX41-213ENST00000512027 ILF3Q12906 894 aaKnown RBP eCLIP16.37■□□□□ 0.21
DDX41-213ENST00000512027 XRCC4Q13426 336 aa16.37■□□□□ 0.21
DDX41-213ENST00000512027 DARS2Q6PI48 645 aaKnown RBP16.37■□□□□ 0.21
DDX41-213ENST00000512027 OGFOD3Q6PK18 319 aa16.37■□□□□ 0.21
DDX41-213ENST00000512027 NLRP8Q86W28 1048 aa16.37■□□□□ 0.21
DDX41-213ENST00000512027 CDKL3Q8IVW4 592 aaPredicted RBP16.37■□□□□ 0.21
DDX41-213ENST00000512027 Q8N9G6 341 aaPredicted RBP16.37■□□□□ 0.21
DDX41-213ENST00000512027 OR2M4Q96R27 311 aa16.37■□□□□ 0.21
DDX41-213ENST00000512027 SPATA16Q9BXB7 569 aa16.37■□□□□ 0.21
DDX41-213ENST00000512027 GSDMCQ9BYG8 508 aa16.37■□□□□ 0.21
DDX41-213ENST00000512027 TRNAU1APQ9NX07 287 aaKnown RBP16.37■□□□□ 0.21
DDX41-213ENST00000512027 GUCA1BQ9UMX6 200 aa16.37■□□□□ 0.21
DDX41-213ENST00000512027 EFR3BQ9Y2G0 817 aa16.37■□□□□ 0.21
DDX41-213ENST00000512027 R3HDM2Q9Y2K5 976 aaKnown RBP16.37■□□□□ 0.21
DDX41-213ENST00000512027 RNF215Q9Y6U7 377 aa16.37■□□□□ 0.21
DDX41-213ENST00000512027 LOC285095A0A1B0GVY8 99 aa16.36■□□□□ 0.21
DDX41-213ENST00000512027 A0A1W2PNU3 283 aaPredicted RBP16.36■□□□□ 0.21
DDX41-213ENST00000512027 KCNN4O15554 427 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms