RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 UROSP10746 265 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 CTRB1P17538 263 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 TCN1P20061 433 aaPredicted RBP5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 SFNP31947 248 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 SLC26A2P50443 739 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 CLCNKBP51801 687 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 RAB14P61106 215 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 COPS2P61201 443 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 RPS16P62249 146 aaKnown RBP5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 MGAT5Q09328 741 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 STXBP2Q15833 593 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 CCDC153Q494R4 210 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 LINC01559Q495D7 138 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 SPATS1Q496A3 300 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 HERC4Q5GLZ8 1057 aaPredicted RBP5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 CT83Q5H943 113 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 EXOSC6Q5RKV6 272 aaKnown RBP5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 SAPCD1Q5SSQ6 148 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 CEP85LQ5SZL2 805 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 THEM4Q5T1C6 240 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 CTRB2Q6GPI1 263 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 KIAA1161Q6NSJ0 714 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 THSD4Q6ZMP0 1018 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 TMC3Q7Z5M5 1100 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 DNAAF5Q86Y56 855 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 RHPN2Q8IUC4 686 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 CHERPQ8IWX8 916 aaKnown RBP5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 ULK2Q8IYT8 1036 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 SH2D3CQ8N5H7 860 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 ACTRT2Q8TDY3 377 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 GATA6Q92908 595 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 SLC35A4Q96G79 324 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 ZNF560Q96MR9 790 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 TRNT1Q96Q11 434 aaKnown RBP5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 WDR11Q9BZH6 1224 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 IKZF4Q9H2S9 585 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 EXO5Q9H790 373 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 ZNF395Q9H8N7 513 aaPredicted RBP5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 GPRC5CQ9NQ84 441 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 XPNPEP3Q9NQH7 507 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 PRDM8Q9NQV8 689 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 KCNH7Q9NS40 1196 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 FAM212BQ9NTI7 297 aaPredicted RBP5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 NCDNQ9UBB6 729 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 DNAJC16Q9Y2G8 782 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 STON1Q9Y6Q2 735 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 MCM3APO60318 1980 aa5.03□□□□□ -1.6
TRAPPC11-208ENST00000511955 NID2Q14112 1375 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 MEX3AA1L020 520 aaKnown RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 VPS37CA5D8V6 355 aaPredicted RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 BTBD18B2RXH4 712 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 MYO1FO00160 1098 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 NOP56O00567 594 aaKnown RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 SYN3O14994 580 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 DYNC1LI2O43237 492 aaPredicted RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 HTRA2O43464 458 aaPredicted RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 HRO43593 1189 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 SASH3O75995 380 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 MYO1DO94832 1006 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 ITGB3P05106 788 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 PRKCBP05771 671 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 SNRPB2P08579 225 aaKnown RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 CYBAP13498 195 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 POLR2EP19388 210 aaKnown RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 TUBG1P23258 451 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 S100A1P23297 94 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 GNA11P29992 359 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 SLC8A1P32418 973 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 ICAM3P32942 547 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 CCR4P51679 360 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 GFRA1P56159 465 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 POLE2P56282 527 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 CYP4F2P78329 520 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 SRSF11Q05519 484 aaKnown RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 ENPEPQ07075 957 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 SRSF5Q13243 272 aaKnown RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 DYNC1I2Q13409 638 aaKnown RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 RPS6KA1Q15418 735 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 TAF1BQ53T94 588 aaPredicted RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 TTMPQ5BVD1 217 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 FAM76BQ5HYJ3 339 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 Q5PR19 223 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 PLEKHS1Q5SXH7 462 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 SFRP5Q5T4F7 317 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 LCE2DQ5TA82 110 aaPredicted RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 KRT40Q6A162 431 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 MOXD1Q6UVY6 613 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 TMC5Q6UXY8 1006 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 ASPGQ86U10 573 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 APLFQ8IW19 511 aaPredicted RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 KLHL7Q8IXQ5 586 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 BLIDQ8IZY5 108 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 KDM8Q8N371 416 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 ENDOVQ8N8Q3 282 aaKnown RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 ATAD1Q8NBU5 361 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 ICA1LQ8NDH6 482 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 TTLQ8NG68 377 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 STK35Q8TDR2 534 aa5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 ISG20Q96AZ6 181 aaKnown RBP5.02□□□□□ -1.61
TRAPPC11-208ENST00000511955 RGMAQ96B86 450 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms