RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 ERN2Q76MJ5 926 aaKnown RBP6.75□□□□□ -1.33
COPS4-209ENST00000511653 PARS2Q7L3T8 475 aaKnown RBP6.75□□□□□ -1.33
COPS4-209ENST00000511653 TFAP2DQ7Z6R9 452 aa6.75□□□□□ -1.33
COPS4-209ENST00000511653 OR7D4Q8NG98 312 aa6.75□□□□□ -1.33
COPS4-209ENST00000511653 MAPK15Q8TD08 544 aa6.75□□□□□ -1.33
COPS4-209ENST00000511653 KCNE4Q8WWG9 221 aa6.75□□□□□ -1.33
COPS4-209ENST00000511653 ATXN7L3BQ96GX2 97 aa6.75□□□□□ -1.33
COPS4-209ENST00000511653 PPP1R13BQ96KQ4 1090 aa6.75□□□□□ -1.33
COPS4-209ENST00000511653 BMFQ96LC9 184 aa6.75□□□□□ -1.33
COPS4-209ENST00000511653 SMURF1Q9HCE7 757 aa6.75□□□□□ -1.33
COPS4-209ENST00000511653 ASNSD1Q9NWL6 643 aa6.75□□□□□ -1.33
COPS4-209ENST00000511653 MPP6Q9NZW5 540 aa6.75□□□□□ -1.33
COPS4-209ENST00000511653 KLHL42Q9P2K6 505 aa6.75□□□□□ -1.33
COPS4-209ENST00000511653 PNMA8BQ9ULN7 279 aaPredicted RBP6.75□□□□□ -1.33
COPS4-209ENST00000511653 SATB2Q9UPW6 733 aa6.75□□□□□ -1.33
COPS4-209ENST00000511653 A6NNZ2 444 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 J3QKU1 62 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 M0QYT0 321 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 SCAMP1O15126 338 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 MED7O43513 233 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 GP1BAP07359 652 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 GLI1P08151 1106 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 ALPPL2P10696 532 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 SLC9A1P19634 815 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 USP8P40818 1118 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 LSSP48449 732 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 PDX1P52945 283 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 CDH4P55283 916 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 MORC3Q14149 939 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 ISXQ2M1V0 245 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 DEFB133Q30KQ1 61 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 HS1BP3Q53T59 392 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 KIAA1614Q5VZ46 1190 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 NEK5Q6P3R8 708 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 TRIM65Q6PJ69 517 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 KYAT3Q6YP21 454 aaKnown RBP6.74□□□□□ -1.33
COPS4-209ENST00000511653 SLC26A9Q7LBE3 791 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 EFL1Q7Z2Z2 1120 aaKnown RBP6.74□□□□□ -1.33
COPS4-209ENST00000511653 RBM12BQ8IXT5 1001 aaKnown RBP6.74□□□□□ -1.33
COPS4-209ENST00000511653 RBFAQ8N0V3 343 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 DCAF4L2Q8NA75 395 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 TMIEQ8NEW7 156 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 FBXW5Q969U6 566 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 VOPP1Q96AW1 172 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 PRR11Q96HE9 360 aaPredicted RBP6.74□□□□□ -1.33
COPS4-209ENST00000511653 KLF6Q99612 283 aaPredicted RBP6.74□□□□□ -1.33
COPS4-209ENST00000511653 TRIM8Q9BZR9 551 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 TKTL2Q9H0I9 626 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 TCEAL2Q9H3H9 227 aaPredicted RBP6.74□□□□□ -1.33
COPS4-209ENST00000511653 POLR1BQ9H9Y6 1135 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 PLCB1Q9NQ66 1216 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 ARHGEF38Q9NXL2 777 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 ZNF212Q9UDV6 495 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 IL36AQ9UHA7 158 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 ITM2BQ9Y287 266 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.74□□□□□ -1.33
COPS4-209ENST00000511653 ATP6V1DQ9Y5K8 247 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 SDK2Q58EX2 2172 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 SPTY2D1-AS1A0A0U1RR47 76 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 CPED1A4D0V7 1026 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 FAM47E-STBD1D6RA91 191 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 NRDCO43847 1150 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 ZMPSTE24O75844 475 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 PAK4O96013 591 aaPredicted RBP6.74□□□□□ -1.33
COPS4-209ENST00000511653 CSF2P04141 144 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 ADRB3P13945 408 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 BPIP17213 487 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 PRKCAP17252 672 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 GKP32189 559 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 CXCR3P49682 368 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 NEK3P51956 506 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 ERVPABLB-1P60509 514 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 HNRNPKP61978 463 aaKnown RBP eCLIP6.74□□□□□ -1.33
COPS4-209ENST00000511653 KRT83P78385 493 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 ARF5P84085 180 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 RHDQ02161 417 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 EFHC1Q5JVL4 640 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 TRNP1Q6NT89 227 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 FOXR2Q6PJQ5 311 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 C11orf57Q6ZUT1 292 aaPredicted RBP6.74□□□□□ -1.33
COPS4-209ENST00000511653 SLC47A2Q86VL8 602 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 PARGQ86W56 976 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 NUP43Q8NFH3 380 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 OR6K2Q8NGY2 324 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 ATL2Q8NHH9 583 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 COG1Q8WTW3 980 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 SHC3Q92529 594 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 CCDC114Q96M63 670 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 TIGD1Q96MW7 591 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 TBCBQ99426 244 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 NPY6RQ99463 290 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 SLC17A9Q9BYT1 436 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 DYRK4Q9NR20 520 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 THSD1Q9NS62 852 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 CATSPERZQ9NTU4 200 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 ENTPD2Q9Y5L3 495 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 FADS3Q9Y5Q0 445 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 X6R8D5 127 aa6.74□□□□□ -1.33
COPS4-209ENST00000511653 IGLV3-10A0A075B6K4 115 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 BICDL2A1A5D9 508 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms