RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 GULP1Q9UBP9 304 aa13.9□□□□□ -0.18
DDX41-212ENST00000511040 CNOT6Q9ULM6 557 aaKnown RBP13.9□□□□□ -0.18
DDX41-212ENST00000511040 SUFUQ9UMX1 484 aa13.9□□□□□ -0.18
DDX41-212ENST00000511040 CPED1A4D0V7 1026 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 RGSL1A5PLK6 1076 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 TPP1O14773 563 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 LIASO43766 372 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 CEP104O60308 925 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 USP12O75317 370 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 METTL18O95568 372 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 ASMTLO95671 621 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 ATP1A1P05023 1023 aaKnown RBP13.89□□□□□ -0.19
DDX41-212ENST00000511040 CKMT1AP12532 417 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 BPIP17213 487 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 HLA-DPA1P20036 260 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 ACP1P24666 158 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 NR0B2Q15466 257 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 C6orf132Q5T0Z8 1188 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 ZNF648Q5T619 568 aaPredicted RBP13.89□□□□□ -0.19
DDX41-212ENST00000511040 HENMT1Q5T8I9 393 aaKnown RBP13.89□□□□□ -0.19
DDX41-212ENST00000511040 GUSBP11Q6P575 273 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 PRUNE1Q86TP1 453 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 NLRP8Q86W28 1048 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 SFTPA2Q8IWL1 248 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 SLC35F3Q8IY50 421 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 TTC30BQ8N4P2 665 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 FAM181AQ8N9Y4 354 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 KYQ8NBH2 561 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 GPR34Q9UPC5 381 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 SLC17A4Q9Y2C5 497 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 AAR2Q9Y312 384 aaKnown RBP13.89□□□□□ -0.19
DDX41-212ENST00000511040 PLEKHM1Q9Y4G2 1056 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 GPSM3Q9Y4H4 160 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 PCDHGA1Q9Y5H4 931 aa13.89□□□□□ -0.19
DDX41-212ENST00000511040 OAS3Q9Y6K5 1087 aaKnown RBP13.89□□□□□ -0.19
DDX41-212ENST00000511040 FGGP02679 453 aa13.88□□□□□ -0.19
DDX41-212ENST00000511040 FGF1P05230 155 aa13.88□□□□□ -0.19
DDX41-212ENST00000511040 PYGLP06737 847 aa13.88□□□□□ -0.19
DDX41-212ENST00000511040 ETS1P14921 441 aa13.88□□□□□ -0.19
DDX41-212ENST00000511040 ADRA1AP35348 466 aa13.88□□□□□ -0.19
DDX41-212ENST00000511040 PTPRCAPQ14761 206 aa13.88□□□□□ -0.19
DDX41-212ENST00000511040 SIX1Q15475 284 aaPredicted RBP13.88□□□□□ -0.19
DDX41-212ENST00000511040 KCTD19Q17RG1 926 aaPredicted RBP13.88□□□□□ -0.19
DDX41-212ENST00000511040 ZNF569Q5MCW4 686 aa13.88□□□□□ -0.19
DDX41-212ENST00000511040 EFL1Q7Z2Z2 1120 aaKnown RBP13.88□□□□□ -0.19
DDX41-212ENST00000511040 GLT6D1Q7Z4J2 308 aa13.88□□□□□ -0.19
DDX41-212ENST00000511040 GKN2Q86XP6 184 aa13.88□□□□□ -0.19
DDX41-212ENST00000511040 FAM46DQ8NEK8 389 aa13.88□□□□□ -0.19
DDX41-212ENST00000511040 IFI44Q8TCB0 444 aa13.88□□□□□ -0.19
DDX41-212ENST00000511040 UBE2Q2Q8WVN8 375 aa13.88□□□□□ -0.19
DDX41-212ENST00000511040 COX14Q96I36 57 aa13.88□□□□□ -0.19
DDX41-212ENST00000511040 PDLIM2Q96JY6 352 aa13.88□□□□□ -0.19
DDX41-212ENST00000511040 CNTNAP3BQ96NU0 1288 aa13.88□□□□□ -0.19
DDX41-212ENST00000511040 SRPK1Q96SB4 655 aaKnown RBP13.88□□□□□ -0.19
DDX41-212ENST00000511040 TBL1YQ9BQ87 522 aa13.88□□□□□ -0.19
DDX41-212ENST00000511040 BOCQ9BWV1 1114 aa13.88□□□□□ -0.19
DDX41-212ENST00000511040 CNTNAP3Q9BZ76 1288 aa13.88□□□□□ -0.19
DDX41-212ENST00000511040 ZNF148Q9UQR1 794 aa13.88□□□□□ -0.19
DDX41-212ENST00000511040 PRKAB1Q9Y478 270 aa13.88□□□□□ -0.19
DDX41-212ENST00000511040 NEUROG3Q9Y4Z2 214 aa13.88□□□□□ -0.19
DDX41-212ENST00000511040 PCYT1BQ9Y5K3 369 aaPredicted RBP13.88□□□□□ -0.19
DDX41-212ENST00000511040 PTPRBP23467 1997 aa13.88□□□□□ -0.19
DDX41-212ENST00000511040 GOLGA4Q13439 2230 aaKnown RBP13.87□□□□□ -0.19
DDX41-212ENST00000511040 SPEGQ15772 3267 aa13.87□□□□□ -0.19
DDX41-212ENST00000511040 ZNF189O75820 626 aaPredicted RBP13.87□□□□□ -0.19
DDX41-212ENST00000511040 IFNB1P01574 187 aa13.87□□□□□ -0.19
DDX41-212ENST00000511040 IVLP07476 585 aa13.87□□□□□ -0.19
DDX41-212ENST00000511040 AK4P27144 223 aaPredicted RBP13.87□□□□□ -0.19
DDX41-212ENST00000511040 ADCY8P40145 1251 aa13.87□□□□□ -0.19
DDX41-212ENST00000511040 DCDC1P59894 354 aa13.87□□□□□ -0.19
DDX41-212ENST00000511040 OASLQ15646 514 aaKnown RBP13.87□□□□□ -0.19
DDX41-212ENST00000511040 LONRF2Q1L5Z9 754 aa13.87□□□□□ -0.19
DDX41-212ENST00000511040 PARP6Q2NL67 630 aa13.87□□□□□ -0.19
DDX41-212ENST00000511040 HES3Q5TGS1 186 aa13.87□□□□□ -0.19
DDX41-212ENST00000511040 RANBP10Q6VN20 620 aa13.87□□□□□ -0.19
DDX41-212ENST00000511040 TMPRSS7Q7RTY8 843 aa13.87□□□□□ -0.19
DDX41-212ENST00000511040 RAVER1Q8IY67 606 aaKnown RBP13.87□□□□□ -0.19
DDX41-212ENST00000511040 SLC35F6Q8N357 371 aa13.87□□□□□ -0.19
DDX41-212ENST00000511040 SCG3Q8WXD2 468 aaKnown RBP13.87□□□□□ -0.19
DDX41-212ENST00000511040 OR2M4Q96R27 311 aa13.87□□□□□ -0.19
DDX41-212ENST00000511040 TRABDQ9H4I3 376 aa13.87□□□□□ -0.19
DDX41-212ENST00000511040 RAD18Q9NS91 495 aa13.87□□□□□ -0.19
DDX41-212ENST00000511040 ZNHIT2Q9UHR6 403 aa13.87□□□□□ -0.19
DDX41-212ENST00000511040 KCTD3Q9Y597 815 aa13.87□□□□□ -0.19
DDX41-212ENST00000511040 ARL5AQ9Y689 179 aa13.87□□□□□ -0.19
DDX41-212ENST00000511040 SCN8AQ9UQD0 1980 aa13.86□□□□□ -0.19
DDX41-212ENST00000511040 USP27XA6NNY8 438 aa13.86□□□□□ -0.19
DDX41-212ENST00000511040 B4DGG1 531 aa13.86□□□□□ -0.19
DDX41-212ENST00000511040 CASC3O15234 703 aaKnown RBP13.86□□□□□ -0.19
DDX41-212ENST00000511040 GPR39O43194 453 aa13.86□□□□□ -0.19
DDX41-212ENST00000511040 ZSCAN12O43309 604 aa13.86□□□□□ -0.19
DDX41-212ENST00000511040 ZSCAN5DPP0CG00 497 aa13.86□□□□□ -0.19
DDX41-212ENST00000511040 TPH1P17752 444 aa13.86□□□□□ -0.19
DDX41-212ENST00000511040 DUSP3P51452 185 aaPredicted RBP13.86□□□□□ -0.19
DDX41-212ENST00000511040 INSM1Q01101 510 aaPredicted RBP13.86□□□□□ -0.19
DDX41-212ENST00000511040 ILKQ13418 452 aa13.86□□□□□ -0.19
DDX41-212ENST00000511040 SMAD1Q15797 465 aaKnown RBP13.86□□□□□ -0.19
DDX41-212ENST00000511040 CHRNA6Q15825 494 aa13.86□□□□□ -0.19
DDX41-212ENST00000511040 PERM1Q5SV97 790 aa13.86□□□□□ -0.19
DDX41-212ENST00000511040 DENND5AQ6IQ26 1287 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms