RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 GLT6D1Q7Z4J2 308 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 RETREG3Q86VR2 466 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 UHRF1Q96T88 793 aaPredicted RBP17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 TCF12Q99081 682 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 SPON2Q9BUD6 331 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 GPR62Q9BZJ7 368 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 UBA2Q9UBT2 640 aaPredicted RBP17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 PTGDR2Q9Y5Y4 395 aa17.87■□□□□ 0.45
CCHCR1-228ENST00000509552 LCHNA4D1U4 455 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 C2orf81A6NN90 581 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 OR6B1O95007 311 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 MATN4O95460 622 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 HGFP14210 728 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 ATP6V1B1P15313 513 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 GRIA3P42263 894 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 ZNF140P52738 457 aaPredicted RBP17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 SMARCB1Q12824 385 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 GRB7Q14451 532 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 MBTPS1Q14703 1052 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 VPS26BQ4G0F5 336 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 OR7D4Q8NG98 312 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 PSKH2Q96QS6 385 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 KCNA7Q96RP8 456 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 CDK5RAP1Q96SZ6 601 aaKnown RBP17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 GPATCH1Q9BRR8 931 aaKnown RBP17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 SLC2A11Q9BYW1 496 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 RETREG1Q9H6L5 497 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 IL1RL2Q9HB29 575 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 TMEM161AQ9NX61 479 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 CNOT6Q9ULM6 557 aaKnown RBP17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 ZNF839A8K0R7 811 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 ACSL4O60488 711 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 PYGLP06737 847 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 ZDHHC11BP0C7U3 371 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 LINC00032P0C843 101 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 PRSS56P0CW18 603 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 IDO1P14902 403 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 FGFR3P22607 806 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 HOXD9P28356 352 aaPredicted RBP17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 SCNN1BP51168 640 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 ACLYP53396 1101 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 OXCT1P55809 520 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 NAA20P61599 178 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 MAP7Q14244 749 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 TAF1AQ15573 450 aaPredicted RBP17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 C5orf22Q49AR2 442 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 MTX3Q5HYI7 312 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 PITRM1Q5JRX3 1037 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 AP1ARQ63HQ0 302 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 RNF19BQ6ZMZ0 732 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 PHYKPLQ8IUZ5 450 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 MINDY1Q8N5J2 469 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 OR4K2Q8NGD2 314 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 GIPC2Q8TF65 315 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 ZUFSPQ96AP4 578 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 CRISPLD1Q9H336 500 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 NOL11Q9H8H0 719 aaKnown RBP17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 MAP10Q9P2G4 905 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 GIMAP2Q9UG22 337 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 VPS9D1Q9Y2B5 631 aa17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 ARIH1Q9Y4X5 557 aaPredicted RBP17.86■□□□□ 0.45
CCHCR1-228ENST00000509552 C7orf72A4D263 438 aa17.85■□□□□ 0.45
CCHCR1-228ENST00000509552 PFDN6O15212 129 aa17.85■□□□□ 0.45
CCHCR1-228ENST00000509552 SLC11A2P49281 568 aa17.85■□□□□ 0.45
CCHCR1-228ENST00000509552 CDH4P55283 916 aa17.85■□□□□ 0.45
CCHCR1-228ENST00000509552 LSAMPQ13449 338 aa17.85■□□□□ 0.45
CCHCR1-228ENST00000509552 ADRM1Q16186 407 aa17.85■□□□□ 0.45
CCHCR1-228ENST00000509552 USP41Q3LFD5 358 aa17.85■□□□□ 0.45
CCHCR1-228ENST00000509552 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.85■□□□□ 0.45
CCHCR1-228ENST00000509552 RBM44Q6ZP01 1051 aaKnown RBP17.85■□□□□ 0.45
CCHCR1-228ENST00000509552 AMIGO2Q86SJ2 522 aa17.85■□□□□ 0.45
CCHCR1-228ENST00000509552 NKAPQ8N5F7 415 aaKnown RBP17.85■□□□□ 0.45
CCHCR1-228ENST00000509552 NACA2Q9H009 215 aa17.85■□□□□ 0.45
CCHCR1-228ENST00000509552 TUBB1Q9H4B7 451 aa17.85■□□□□ 0.45
CCHCR1-228ENST00000509552 SEMA4BQ9NPR2 832 aaPredicted RBP17.85■□□□□ 0.45
CCHCR1-228ENST00000509552 SDR39U1Q9NRG7 319 aaPredicted RBP17.85■□□□□ 0.45
CCHCR1-228ENST00000509552 ARMC1Q9NVT9 282 aa17.85■□□□□ 0.45
CCHCR1-228ENST00000509552 ABCD2Q9UBJ2 740 aa17.85■□□□□ 0.45
CCHCR1-228ENST00000509552 POLG2Q9UHN1 485 aa17.85■□□□□ 0.45
CCHCR1-228ENST00000509552 DNMT3LQ9UJW3 386 aa17.85■□□□□ 0.45
CCHCR1-228ENST00000509552 PADI4Q9UM07 663 aa17.85■□□□□ 0.45
CCHCR1-228ENST00000509552 BTRCQ9Y297 605 aa17.85■□□□□ 0.45
CCHCR1-228ENST00000509552 SPO11Q9Y5K1 396 aa17.85■□□□□ 0.45
CCHCR1-228ENST00000509552 AK5Q9Y6K8 562 aa17.85■□□□□ 0.45
CCHCR1-228ENST00000509552 ZFP37Q9Y6Q3 630 aaPredicted RBP17.85■□□□□ 0.45
CCHCR1-228ENST00000509552 INSIG1O15503 277 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 AKAP10O43572 662 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 ALDH2P05091 517 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 COL6A1P12109 1028 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 CAPN3P20807 821 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 DUSP4Q13115 394 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 TSNQ15631 228 aaKnown RBP17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 NADK2Q4G0N4 442 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 TRAF7Q6Q0C0 670 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 CHERPQ8IWX8 916 aaKnown RBP17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 CYP2S1Q96SQ9 504 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 CIB1Q99828 191 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 GRIP2Q9C0E4 1043 aa17.84■□□□□ 0.45
CCHCR1-228ENST00000509552 SCUBE2Q9NQ36 999 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms