RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 ZNF70Q9UC06 446 aaPredicted RBP4.55□□□□□ -1.68
NIPBL-206ENST00000509429 CAPN11Q9UMQ6 739 aa4.55□□□□□ -1.68
NIPBL-206ENST00000509429 AGAP1Q9UPQ3 857 aa4.55□□□□□ -1.68
NIPBL-206ENST00000509429 LIPT1Q9Y234 373 aa4.55□□□□□ -1.68
NIPBL-206ENST00000509429 MRPS2Q9Y399 296 aaKnown RBP4.55□□□□□ -1.68
NIPBL-206ENST00000509429 CCL27Q9Y4X3 112 aa4.55□□□□□ -1.68
NIPBL-206ENST00000509429 NOX1Q9Y5S8 564 aa4.55□□□□□ -1.68
NIPBL-206ENST00000509429 NPFFR2Q9Y5X5 522 aa4.55□□□□□ -1.68
NIPBL-206ENST00000509429 POMT1Q9Y6A1 747 aa4.55□□□□□ -1.68
NIPBL-206ENST00000509429 SYCP2Q9BX26 1530 aa4.55□□□□□ -1.68
NIPBL-206ENST00000509429 ARHGEF17Q96PE2 2063 aaPredicted RBP4.55□□□□□ -1.68
NIPBL-206ENST00000509429 A2MP01023 1474 aa4.55□□□□□ -1.68
NIPBL-206ENST00000509429 NUP155O75694 1391 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 ZMYM3Q14202 1370 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 MYO3AQ8NEV4 1616 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 FRMPD4Q14CM0 1322 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 TRBV23-1A0A0A0MS06 115 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 A0A0U1RQV5 110 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 C5orf51A6NDU8 294 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 OR6C75A6NL08 312 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 ARNTLO00327 626 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 ZNF197O14709 1029 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 MEIS2O14770 477 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 FPGTO14772 594 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 SYN3O14994 580 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 PRODHO43272 600 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 SSX5O60225 188 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 TBC1D4O60343 1298 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 RHBDL1O75783 438 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 CDK14O94921 469 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 SPDEFO95238 335 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 KRT6AP02538 564 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 KRT6BP04259 564 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 ALPPP05187 535 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 LIPFP07098 398 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 ALPPL2P10696 532 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 NCF1P14598 390 aaPredicted RBP4.54□□□□□ -1.68
NIPBL-206ENST00000509429 CPA1P15085 419 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 SLC9A1P19634 815 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 SLC7A1P30825 629 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 IFNA8P32881 189 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 CAPGP40121 348 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 ADCYAP1R1P41586 468 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 CASP3P42574 277 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 SLC15A1P46059 708 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 SLC9A3P48764 834 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 CCT3P49368 545 aaKnown RBP4.54□□□□□ -1.68
NIPBL-206ENST00000509429 MECP2P51608 486 aaKnown RBP4.54□□□□□ -1.68
NIPBL-206ENST00000509429 CCR5P51681 352 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 CASP9P55211 416 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 STX17P56962 302 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 PMP22Q01453 160 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 CEBPZQ03701 1054 aaKnown RBP4.54□□□□□ -1.68
NIPBL-206ENST00000509429 PPATQ06203 517 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 EIF4HQ15056 248 aaKnown RBP4.54□□□□□ -1.68
NIPBL-206ENST00000509429 PDK1Q15118 436 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 DGKDQ16760 1214 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 MPEG1Q2M385 716 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 HFEQ30201 348 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 PDCD4Q53EL6 469 aaKnown RBP4.54□□□□□ -1.68
NIPBL-206ENST00000509429 SGO1Q5FBB7 561 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 BMP2KLQ5H9B9 411 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 TMEM31Q5JXX7 168 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 RIPPLY2Q5TAB7 128 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 SLC9C2Q5TAH2 1124 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 C6orf163Q5TEZ5 329 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 FAXCQ5TGI0 409 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 RNF220Q5VTB9 566 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 DAB2IPQ5VWQ8 1189 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 KIAA1161Q6NSJ0 714 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 TIGD7Q6NT04 549 aaPredicted RBP4.54□□□□□ -1.68
NIPBL-206ENST00000509429 CWC27Q6UX04 472 aaKnown RBP4.54□□□□□ -1.68
NIPBL-206ENST00000509429 NSMFQ6X4W1 530 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 ANO5Q75V66 913 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 UTS2BQ765I0 119 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 CNTN4Q8IWV2 1026 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 ZNF679Q8IYX0 411 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 TBC1D19Q8N5T2 526 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 ICA1LQ8NDH6 482 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 RCBTB1Q8NDN9 531 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 SRFBP1Q8NEF9 429 aaKnown RBP4.54□□□□□ -1.68
NIPBL-206ENST00000509429 NEK11Q8NG66 645 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 CCDC12Q8WUD4 166 aaPredicted RBP4.54□□□□□ -1.68
NIPBL-206ENST00000509429 LRTOMTQ8WZ04 291 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 THRSPQ92748 146 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 MR1Q95460 341 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 NT5C3BQ969T7 300 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 PPP1R14AQ96A00 147 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 RMDN1Q96DB5 314 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 C14orf79Q96F83 325 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 TEKT5Q96M29 485 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 NSMCE2Q96MF7 247 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 TRNT1Q96Q11 434 aaKnown RBP4.54□□□□□ -1.68
NIPBL-206ENST00000509429 NEU1Q99519 415 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 FAM118BQ9BPY3 351 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 RBM4BQ9BQ04 359 aaKnown RBP4.54□□□□□ -1.68
NIPBL-206ENST00000509429 RBM4Q9BWF3 364 aaKnown RBP4.54□□□□□ -1.68
NIPBL-206ENST00000509429 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
NIPBL-206ENST00000509429 TRIM54Q9BYV2 358 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms